Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 RN7SKP164-201ENST00000516138 266 ntBASIC5.32□□□□□ -1.56
PHOX2BQ99453 RNA5SP464-201ENST00000516251 108 ntBASIC5.32□□□□□ -1.56
PHOX2BQ99453 RNU7-121P-201ENST00000516604 62 ntBASIC5.32□□□□□ -1.56
PHOX2BQ99453 RNA5SP230-201ENST00000517039 122 ntBASIC5.32□□□□□ -1.56
PHOX2BQ99453 SNORA31.23-201ENST00000517219 133 ntBASIC5.32□□□□□ -1.56
PHOX2BQ99453 AC133555.2-201ENST00000550213 292 ntBASIC5.32□□□□□ -1.56
PHOX2BQ99453 AP005403.1-201ENST00000579720 229 ntBASIC5.32□□□□□ -1.56
PHOX2BQ99453 MIR3145-201ENST00000580727 82 ntBASIC5.32□□□□□ -1.56
PHOX2BQ99453 MIR3667-201ENST00000581025 74 ntBASIC5.32□□□□□ -1.56
PHOX2BQ99453 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC5.32□□□□□ -1.56
PHOX2BQ99453 AL078604.3-201ENST00000615580 211 ntBASIC5.32□□□□□ -1.56
PHOX2BQ99453 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC5.32□□□□□ -1.56
PHOX2BQ99453 AC091932.3-201ENST00000624223 323 ntBASIC5.32□□□□□ -1.56
PHOX2BQ99453 AC112200.1-201ENST00000625015 234 ntBASIC5.32□□□□□ -1.56
PHOX2BQ99453 MIR3674-201ENST00000636576 68 ntBASIC5.32□□□□□ -1.56
PHOX2BQ99453 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PHOX2BQ99453 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
PHOX2BQ99453 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
PHOX2BQ99453 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PHOX2BQ99453 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
PHOX2BQ99453 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
PHOX2BQ99453 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PHOX2BQ99453 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC5.31□□□□□ -1.56
PHOX2BQ99453 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PHOX2BQ99453 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
PHOX2BQ99453 RN7SKP185-201ENST00000362813 326 ntBASIC5.31□□□□□ -1.56
PHOX2BQ99453 RNU6-487P-201ENST00000365430 104 ntBASIC5.31□□□□□ -1.56
PHOX2BQ99453 Y_RNA.353-201ENST00000365440 108 ntBASIC5.31□□□□□ -1.56
PHOX2BQ99453 FTH1P15-201ENST00000406984 280 ntBASIC5.31□□□□□ -1.56
PHOX2BQ99453 AC009963.1-201ENST00000417265 157 ntBASIC5.31□□□□□ -1.56
PHOX2BQ99453 RPL30P13-201ENST00000418873 348 ntBASIC5.31□□□□□ -1.56
PHOX2BQ99453 snoU13.6-201ENST00000458785 104 ntBASIC5.31□□□□□ -1.56
PHOX2BQ99453 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC5.31□□□□□ -1.56
PHOX2BQ99453 AC140172.1-201ENST00000502928 141 ntBASIC5.31□□□□□ -1.56
PHOX2BQ99453 MIR4311-201ENST00000580794 100 ntBASIC5.31□□□□□ -1.56
PHOX2BQ99453 DEFB117-201ENST00000602356 141 ntBASIC5.31□□□□□ -1.56
PHOX2BQ99453 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
PHOX2BQ99453 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.31□□□□□ -1.56
PHOX2BQ99453 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.31□□□□□ -1.56
PHOX2BQ99453 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PHOX2BQ99453 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
PHOX2BQ99453 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.31□□□□□ -1.56
PHOX2BQ99453 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
PHOX2BQ99453 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PHOX2BQ99453 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
PHOX2BQ99453 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5.31□□□□□ -1.56
PHOX2BQ99453 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
PHOX2BQ99453 ADAM3A-203ENST00000461344 2157 ntBASIC5.31□□□□□ -1.56
PHOX2BQ99453 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.31□□□□□ -1.56
PHOX2BQ99453 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.3□□□□□ -1.56
PHOX2BQ99453 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
PHOX2BQ99453 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PHOX2BQ99453 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.3□□□□□ -1.56
PHOX2BQ99453 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.3□□□□□ -1.56
PHOX2BQ99453 RN7SKP145-201ENST00000363291 303 ntBASIC5.3□□□□□ -1.56
PHOX2BQ99453 RNU6-1285P-201ENST00000363480 105 ntBASIC5.3□□□□□ -1.56
PHOX2BQ99453 RNU6-525P-201ENST00000363685 104 ntBASIC5.3□□□□□ -1.56
PHOX2BQ99453 RNU6-215P-201ENST00000365169 102 ntBASIC5.3□□□□□ -1.56
PHOX2BQ99453 MIR539-201ENST00000365690 78 ntBASIC5.3□□□□□ -1.56
PHOX2BQ99453 SNORA36A-201ENST00000384221 132 ntBASIC5.3□□□□□ -1.56
PHOX2BQ99453 SNORD20-201ENST00000384550 80 ntBASIC5.3□□□□□ -1.56
PHOX2BQ99453 MIR600-201ENST00000385007 98 ntBASIC5.3□□□□□ -1.56
PHOX2BQ99453 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
PHOX2BQ99453 MIR513C-201ENST00000401352 84 ntBASIC5.3□□□□□ -1.56
PHOX2BQ99453 RN7SKP53-201ENST00000411337 315 ntBASIC5.3□□□□□ -1.56
PHOX2BQ99453 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC5.3□□□□□ -1.56
PHOX2BQ99453 RPL21P66-201ENST00000426566 466 ntBASIC5.3□□□□□ -1.56
PHOX2BQ99453 AL732292.1-201ENST00000426692 226 ntBASIC5.3□□□□□ -1.56
PHOX2BQ99453 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC5.3□□□□□ -1.56
PHOX2BQ99453 IFNA11P-201ENST00000446352 526 ntBASIC5.3□□□□□ -1.56
PHOX2BQ99453 BTF3P6-201ENST00000448054 499 ntBASIC5.3□□□□□ -1.56
PHOX2BQ99453 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC5.3□□□□□ -1.56
PHOX2BQ99453 AC010618.1-201ENST00000469924 477 ntBASIC5.3□□□□□ -1.56
PHOX2BQ99453 RPL30P12-201ENST00000474666 353 ntBASIC5.3□□□□□ -1.56
PHOX2BQ99453 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.3□□□□□ -1.56
PHOX2BQ99453 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.3□□□□□ -1.56
PHOX2BQ99453 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC5.3□□□□□ -1.56
PHOX2BQ99453 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PHOX2BQ99453 MIR4431-201ENST00000579990 94 ntBASIC5.3□□□□□ -1.56
PHOX2BQ99453 SNRPGP20-201ENST00000604477 205 ntBASIC5.3□□□□□ -1.56
PHOX2BQ99453 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
PHOX2BQ99453 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.3□□□□□ -1.56
PHOX2BQ99453 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC5.3□□□□□ -1.56
PHOX2BQ99453 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PHOX2BQ99453 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
PHOX2BQ99453 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
PHOX2BQ99453 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
PHOX2BQ99453 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
PHOX2BQ99453 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
PHOX2BQ99453 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PHOX2BQ99453 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
PHOX2BQ99453 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
PHOX2BQ99453 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PHOX2BQ99453 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PHOX2BQ99453 MIR186-201ENST00000384988 86 ntBASIC5.29□□□□□ -1.56
PHOX2BQ99453 RNU6-1199P-201ENST00000411249 104 ntBASIC5.29□□□□□ -1.56
PHOX2BQ99453 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PHOX2BQ99453 NDUFB4P6-201ENST00000436819 366 ntBASIC5.29□□□□□ -1.56
PHOX2BQ99453 RPL34P20-201ENST00000442771 351 ntBASIC5.29□□□□□ -1.56
PHOX2BQ99453 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms