Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 AL356321.1-201ENST00000621360 228 ntBASIC3.03□□□□□ -1.92
NR1H4Q96RI1 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
NR1H4Q96RI1 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.03□□□□□ -1.92
NR1H4Q96RI1 AL354685.2-201ENST00000448218 1447 ntBASIC3.02□□□□□ -1.93
NR1H4Q96RI1 AC010889.1-201ENST00000566193 2666 ntBASIC3.02□□□□□ -1.93
NR1H4Q96RI1 SNORD3E-201ENST00000362899 217 ntBASIC3.02□□□□□ -1.93
NR1H4Q96RI1 SNORD14B-201ENST00000364533 90 ntBASIC3.02□□□□□ -1.93
NR1H4Q96RI1 RNU6-1280P-201ENST00000365211 107 ntBASIC3.02□□□□□ -1.93
NR1H4Q96RI1 RNU4-12P-201ENST00000365233 139 ntBASIC3.02□□□□□ -1.93
NR1H4Q96RI1 RNU6-898P-201ENST00000365627 104 ntBASIC3.02□□□□□ -1.93
NR1H4Q96RI1 Y_RNA.402-201ENST00000383972 102 ntBASIC3.02□□□□□ -1.93
NR1H4Q96RI1 RNU6-483P-201ENST00000384088 108 ntBASIC3.02□□□□□ -1.93
NR1H4Q96RI1 RNU6-780P-201ENST00000391030 104 ntBASIC3.02□□□□□ -1.93
NR1H4Q96RI1 FCF1P9-201ENST00000412546 282 ntBASIC3.02□□□□□ -1.93
NR1H4Q96RI1 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.02□□□□□ -1.93
NR1H4Q96RI1 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.02□□□□□ -1.93
NR1H4Q96RI1 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.02□□□□□ -1.93
NR1H4Q96RI1 AC073063.1-201ENST00000434352 607 ntBASIC3.02□□□□□ -1.93
NR1H4Q96RI1 AL161651.1-201ENST00000440882 223 ntBASIC3.02□□□□□ -1.93
NR1H4Q96RI1 WASF1P1-201ENST00000447560 1131 ntBASIC3.02□□□□□ -1.93
NR1H4Q96RI1 AL358232.1-201ENST00000448030 501 ntBASIC3.02□□□□□ -1.93
NR1H4Q96RI1 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.02□□□□□ -1.93
NR1H4Q96RI1 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.02□□□□□ -1.93
NR1H4Q96RI1 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.02□□□□□ -1.93
NR1H4Q96RI1 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.02□□□□□ -1.93
NR1H4Q96RI1 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.02□□□□□ -1.93
NR1H4Q96RI1 HMGN1P11-201ENST00000508668 303 ntBASIC3.02□□□□□ -1.93
NR1H4Q96RI1 RNU4-29P-201ENST00000515943 174 ntBASIC3.02□□□□□ -1.93
NR1H4Q96RI1 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.02□□□□□ -1.93
NR1H4Q96RI1 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.02□□□□□ -1.93
NR1H4Q96RI1 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.02□□□□□ -1.93
NR1H4Q96RI1 AC109635.3-201ENST00000529536 185 ntBASIC3.02□□□□□ -1.93
NR1H4Q96RI1 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.02□□□□□ -1.93
NR1H4Q96RI1 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.02□□□□□ -1.93
NR1H4Q96RI1 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
NR1H4Q96RI1 AC092325.1-201ENST00000566449 554 ntBASIC3.02□□□□□ -1.93
NR1H4Q96RI1 MIR3941-201ENST00000582572 103 ntBASIC3.02□□□□□ -1.93
NR1H4Q96RI1 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
NR1H4Q96RI1 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.02□□□□□ -1.93
NR1H4Q96RI1 RPL23AP88-201ENST00000605759 454 ntBASIC3.02□□□□□ -1.93
NR1H4Q96RI1 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
NR1H4Q96RI1 MIR6134-201ENST00000617606 109 ntBASIC3.02□□□□□ -1.93
NR1H4Q96RI1 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.02□□□□□ -1.93
NR1H4Q96RI1 MIR1321-201ENST00000637766 79 ntBASIC3.02□□□□□ -1.93
NR1H4Q96RI1 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.02□□□□□ -1.93
NR1H4Q96RI1 AC119674.1-207ENST00000641355 633 ntBASIC3.02□□□□□ -1.93
NR1H4Q96RI1 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
NR1H4Q96RI1 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.02□□□□□ -1.93
NR1H4Q96RI1 ZNF519P1-201ENST00000449011 1626 ntBASIC3.01□□□□□ -1.93
NR1H4Q96RI1 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.01□□□□□ -1.93
NR1H4Q96RI1 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.01□□□□□ -1.93
NR1H4Q96RI1 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
NR1H4Q96RI1 AL049781.1-201ENST00000623195 3585 ntBASIC3.01□□□□□ -1.93
NR1H4Q96RI1 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
NR1H4Q96RI1 RNU6-1127P-201ENST00000384580 107 ntBASIC3.01□□□□□ -1.93
NR1H4Q96RI1 AL590004.2-201ENST00000404787 371 ntBASIC3.01□□□□□ -1.93
NR1H4Q96RI1 RNA5SP229-201ENST00000410809 99 ntBASIC3.01□□□□□ -1.93
NR1H4Q96RI1 RPL19P1-201ENST00000411635 428 ntBASIC3.01□□□□□ -1.93
NR1H4Q96RI1 AL353621.1-201ENST00000418219 243 ntBASIC3.01□□□□□ -1.93
NR1H4Q96RI1 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.01□□□□□ -1.93
NR1H4Q96RI1 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.01□□□□□ -1.93
NR1H4Q96RI1 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.01□□□□□ -1.93
NR1H4Q96RI1 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.01□□□□□ -1.93
NR1H4Q96RI1 PRPS1P1-201ENST00000445305 876 ntBASIC3.01□□□□□ -1.93
NR1H4Q96RI1 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.01□□□□□ -1.93
NR1H4Q96RI1 AC092001.1-201ENST00000453012 261 ntBASIC3.01□□□□□ -1.93
NR1H4Q96RI1 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.01□□□□□ -1.93
NR1H4Q96RI1 AL441985.1-201ENST00000457727 251 ntBASIC3.01□□□□□ -1.93
NR1H4Q96RI1 RPL27AP5-201ENST00000469428 449 ntBASIC3.01□□□□□ -1.93
NR1H4Q96RI1 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
NR1H4Q96RI1 MTND3P25-201ENST00000509243 135 ntBASIC3.01□□□□□ -1.93
NR1H4Q96RI1 AC113155.1-201ENST00000511141 769 ntBASIC3.01□□□□□ -1.93
NR1H4Q96RI1 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.01□□□□□ -1.93
NR1H4Q96RI1 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.01□□□□□ -1.93
NR1H4Q96RI1 HSPE1P20-201ENST00000538133 289 ntBASIC3.01□□□□□ -1.93
NR1H4Q96RI1 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.01□□□□□ -1.93
NR1H4Q96RI1 AC073539.2-201ENST00000597113 165 ntBASIC3.01□□□□□ -1.93
NR1H4Q96RI1 AL021997.1-201ENST00000605757 193 ntBASIC3.01□□□□□ -1.93
NR1H4Q96RI1 U2.17-201ENST00000611454 95 ntBASIC3.01□□□□□ -1.93
NR1H4Q96RI1 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.01□□□□□ -1.93
NR1H4Q96RI1 AL731566.2-201ENST00000618971 317 ntBASIC3.01□□□□□ -1.93
NR1H4Q96RI1 U4.6-201ENST00000621618 127 ntBASIC3.01□□□□□ -1.93
NR1H4Q96RI1 YWHAEP7-203ENST00000622054 312 ntBASIC3.01□□□□□ -1.93
NR1H4Q96RI1 AC002064.3-201ENST00000623448 346 ntBASIC3.01□□□□□ -1.93
NR1H4Q96RI1 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
NR1H4Q96RI1 AC093536.2-201ENST00000565257 1406 ntBASIC3.01□□□□□ -1.93
NR1H4Q96RI1 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
NR1H4Q96RI1 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3□□□□□ -1.93
NR1H4Q96RI1 CDC27P3-201ENST00000635418 1910 ntBASIC3□□□□□ -1.93
NR1H4Q96RI1 RNA5SP515-201ENST00000364570 118 ntBASIC3□□□□□ -1.93
NR1H4Q96RI1 Z98749.2-208ENST00000381646 500 ntBASIC3□□□□□ -1.93
NR1H4Q96RI1 Y_RNA.480-201ENST00000384364 102 ntBASIC3□□□□□ -1.93
NR1H4Q96RI1 Y_RNA.554-201ENST00000384672 102 ntBASIC3□□□□□ -1.93
NR1H4Q96RI1 RNU6-19P-201ENST00000384718 107 ntBASIC3□□□□□ -1.93
NR1H4Q96RI1 Y_RNA.573-201ENST00000384763 105 ntBASIC3□□□□□ -1.93
NR1H4Q96RI1 CIR1P3-201ENST00000405137 479 ntBASIC3□□□□□ -1.93
NR1H4Q96RI1 RPS4XP7-201ENST00000406274 780 ntBASIC3□□□□□ -1.93
NR1H4Q96RI1 RAP1BP3-201ENST00000407180 549 ntBASIC3□□□□□ -1.93
NR1H4Q96RI1 RAB9AP3-201ENST00000412737 573 ntBASIC3□□□□□ -1.93
NR1H4Q96RI1 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms