Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
NEK1Q96PY6 AC243972.3-201ENST00000539655 198 ntBASIC3.05□□□□□ -1.92
NEK1Q96PY6 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.05□□□□□ -1.92
NEK1Q96PY6 AL391840.1-201ENST00000571144 367 ntBASIC3.05□□□□□ -1.92
NEK1Q96PY6 Z84480.1-201ENST00000605131 311 ntBASIC3.05□□□□□ -1.92
NEK1Q96PY6 AC011939.3-201ENST00000613686 466 ntBASIC3.05□□□□□ -1.92
NEK1Q96PY6 MIR7843-201ENST00000622274 79 ntBASIC3.05□□□□□ -1.92
NEK1Q96PY6 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.05□□□□□ -1.92
NEK1Q96PY6 AC110079.1-202ENST00000635213 138 ntBASIC3.05□□□□□ -1.92
NEK1Q96PY6 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
NEK1Q96PY6 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
NEK1Q96PY6 SNORD62.1-201ENST00000362541 86 ntBASIC3.04□□□□□ -1.92
NEK1Q96PY6 RNU1-105P-201ENST00000363470 161 ntBASIC3.04□□□□□ -1.92
NEK1Q96PY6 RNU6-270P-201ENST00000364131 105 ntBASIC3.04□□□□□ -1.92
NEK1Q96PY6 RNU4-75P-201ENST00000364621 146 ntBASIC3.04□□□□□ -1.92
NEK1Q96PY6 RNU6-282P-201ENST00000365357 103 ntBASIC3.04□□□□□ -1.92
NEK1Q96PY6 RNU6-217P-201ENST00000384164 104 ntBASIC3.04□□□□□ -1.92
NEK1Q96PY6 MIR558-201ENST00000384920 94 ntBASIC3.04□□□□□ -1.92
NEK1Q96PY6 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.04□□□□□ -1.92
NEK1Q96PY6 RPL7P37-201ENST00000425095 738 ntBASIC3.04□□□□□ -1.92
NEK1Q96PY6 ZNF863P-201ENST00000426746 417 ntBASIC3.04□□□□□ -1.92
NEK1Q96PY6 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.04□□□□□ -1.92
NEK1Q96PY6 VN1R108P-201ENST00000431580 830 ntBASIC3.04□□□□□ -1.92
NEK1Q96PY6 RPL23AP30-201ENST00000432419 501 ntBASIC3.04□□□□□ -1.92
NEK1Q96PY6 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC3.04□□□□□ -1.92
NEK1Q96PY6 AC010095.1-201ENST00000443543 144 ntBASIC3.04□□□□□ -1.92
NEK1Q96PY6 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
NEK1Q96PY6 CECR9-201ENST00000453421 199 ntBASIC3.04□□□□□ -1.92
NEK1Q96PY6 RNU6-953P-201ENST00000459154 107 ntBASIC3.04□□□□□ -1.92
NEK1Q96PY6 SRIP1-201ENST00000489235 288 ntBASIC3.04□□□□□ -1.92
NEK1Q96PY6 AC007182.2-201ENST00000489251 402 ntBASIC3.04□□□□□ -1.92
NEK1Q96PY6 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.04□□□□□ -1.92
NEK1Q96PY6 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.04□□□□□ -1.92
NEK1Q96PY6 AC117522.1-201ENST00000509821 380 ntBASIC3.04□□□□□ -1.92
NEK1Q96PY6 RNU6-405P-201ENST00000516637 110 ntBASIC3.04□□□□□ -1.92
NEK1Q96PY6 RN7SKP40-201ENST00000517211 242 ntBASIC3.04□□□□□ -1.92
NEK1Q96PY6 MTCO2P4-201ENST00000517968 247 ntBASIC3.04□□□□□ -1.92
NEK1Q96PY6 AC090572.1-201ENST00000519251 160 ntBASIC3.04□□□□□ -1.92
NEK1Q96PY6 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.04□□□□□ -1.92
NEK1Q96PY6 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.04□□□□□ -1.92
NEK1Q96PY6 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
NEK1Q96PY6 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.04□□□□□ -1.92
NEK1Q96PY6 AC098848.2-201ENST00000588023 330 ntBASIC3.04□□□□□ -1.92
NEK1Q96PY6 AC091805.2-201ENST00000603848 235 ntBASIC3.04□□□□□ -1.92
NEK1Q96PY6 AL161798.1-201ENST00000604630 131 ntBASIC3.04□□□□□ -1.92
NEK1Q96PY6 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.04□□□□□ -1.92
NEK1Q96PY6 AC064807.4-201ENST00000607201 407 ntBASIC3.04□□□□□ -1.92
NEK1Q96PY6 AC104073.3-201ENST00000610942 955 ntBASIC3.04□□□□□ -1.92
NEK1Q96PY6 AC005332.10-201ENST00000612725 619 ntBASIC3.04□□□□□ -1.92
NEK1Q96PY6 AC099842.1-201ENST00000619919 596 ntBASIC3.04□□□□□ -1.92
NEK1Q96PY6 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.04□□□□□ -1.92
NEK1Q96PY6 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.04□□□□□ -1.92
NEK1Q96PY6 ZNF519P1-201ENST00000449011 1626 ntBASIC3.04□□□□□ -1.92
NEK1Q96PY6 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.03□□□□□ -1.92
NEK1Q96PY6 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.03□□□□□ -1.92
NEK1Q96PY6 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
NEK1Q96PY6 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
NEK1Q96PY6 RNU6-181P-201ENST00000363225 107 ntBASIC3.03□□□□□ -1.92
NEK1Q96PY6 SNORA70B-201ENST00000384210 135 ntBASIC3.03□□□□□ -1.92
NEK1Q96PY6 MIR627-201ENST00000384979 97 ntBASIC3.03□□□□□ -1.92
NEK1Q96PY6 RPS12P24-201ENST00000412619 387 ntBASIC3.03□□□□□ -1.92
NEK1Q96PY6 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.03□□□□□ -1.92
NEK1Q96PY6 MED13P1-201ENST00000428342 171 ntBASIC3.03□□□□□ -1.92
NEK1Q96PY6 AC133104.1-201ENST00000429100 218 ntBASIC3.03□□□□□ -1.92
NEK1Q96PY6 ARL5AP4-201ENST00000430731 512 ntBASIC3.03□□□□□ -1.92
NEK1Q96PY6 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.03□□□□□ -1.92
NEK1Q96PY6 AL714022.1-201ENST00000439897 151 ntBASIC3.03□□□□□ -1.92
NEK1Q96PY6 MTCYBP1-201ENST00000454315 1119 ntBASIC3.03□□□□□ -1.92
NEK1Q96PY6 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.03□□□□□ -1.92
NEK1Q96PY6 C1DP4-201ENST00000455429 424 ntBASIC3.03□□□□□ -1.92
NEK1Q96PY6 RPL12P25-201ENST00000455592 494 ntBASIC3.03□□□□□ -1.92
NEK1Q96PY6 AC138853.1-201ENST00000503549 823 ntBASIC3.03□□□□□ -1.92
NEK1Q96PY6 RNU4-29P-201ENST00000515943 174 ntBASIC3.03□□□□□ -1.92
NEK1Q96PY6 RPPH1-2P-201ENST00000516688 293 ntBASIC3.03□□□□□ -1.92
NEK1Q96PY6 RNU6-445P-201ENST00000516949 107 ntBASIC3.03□□□□□ -1.92
NEK1Q96PY6 CKS1BP7-201ENST00000522230 235 ntBASIC3.03□□□□□ -1.92
NEK1Q96PY6 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.03□□□□□ -1.92
NEK1Q96PY6 AP002770.2-201ENST00000543613 532 ntBASIC3.03□□□□□ -1.92
NEK1Q96PY6 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
NEK1Q96PY6 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.03□□□□□ -1.92
NEK1Q96PY6 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.03□□□□□ -1.92
NEK1Q96PY6 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.03□□□□□ -1.92
NEK1Q96PY6 AC068135.2-201ENST00000569293 1028 ntBASIC3.03□□□□□ -1.92
NEK1Q96PY6 MIR5092-201ENST00000583139 88 ntBASIC3.03□□□□□ -1.92
NEK1Q96PY6 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.03□□□□□ -1.92
NEK1Q96PY6 AC068790.2-201ENST00000602601 557 ntBASIC3.03□□□□□ -1.92
NEK1Q96PY6 AL121992.2-201ENST00000606262 256 ntBASIC3.03□□□□□ -1.92
NEK1Q96PY6 AL365204.3-201ENST00000612448 685 ntBASIC3.03□□□□□ -1.92
NEK1Q96PY6 Z99129.1-201ENST00000612510 255 ntBASIC3.03□□□□□ -1.92
NEK1Q96PY6 AC130324.3-201ENST00000614165 542 ntBASIC3.03□□□□□ -1.92
NEK1Q96PY6 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.03□□□□□ -1.92
NEK1Q96PY6 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
NEK1Q96PY6 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
NEK1Q96PY6 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.02□□□□□ -1.93
NEK1Q96PY6 Y_RNA.22-201ENST00000362492 102 ntBASIC3.02□□□□□ -1.93
NEK1Q96PY6 RNU6-456P-201ENST00000384493 107 ntBASIC3.02□□□□□ -1.93
NEK1Q96PY6 MIR34A-201ENST00000385130 110 ntBASIC3.02□□□□□ -1.93
NEK1Q96PY6 RNA5SP354-201ENST00000391247 136 ntBASIC3.02□□□□□ -1.93
NEK1Q96PY6 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.02□□□□□ -1.93
NEK1Q96PY6 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms