Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 RNU6-460P-201ENST00000391158 108 ntBASIC4.87□□□□□ -1.63
CNTNAP3BQ96NU0 AL592148.1-201ENST00000413568 445 ntBASIC4.87□□□□□ -1.63
CNTNAP3BQ96NU0 RPL7AP25-201ENST00000423357 805 ntBASIC4.87□□□□□ -1.63
CNTNAP3BQ96NU0 AIMP1P2-201ENST00000425294 312 ntBASIC4.87□□□□□ -1.63
CNTNAP3BQ96NU0 BTF3P11-201ENST00000426582 477 ntBASIC4.87□□□□□ -1.63
CNTNAP3BQ96NU0 COX6B1P7-201ENST00000430845 235 ntBASIC4.87□□□□□ -1.63
CNTNAP3BQ96NU0 AL589765.3-201ENST00000446084 462 ntBASIC4.87□□□□□ -1.63
CNTNAP3BQ96NU0 AP000870.1-201ENST00000472927 406 ntBASIC4.87□□□□□ -1.63
CNTNAP3BQ96NU0 RPL31P61-201ENST00000496160 376 ntBASIC4.87□□□□□ -1.63
CNTNAP3BQ96NU0 RNU6-1114P-201ENST00000516022 107 ntBASIC4.87□□□□□ -1.63
CNTNAP3BQ96NU0 MIR3138-201ENST00000585238 82 ntBASIC4.87□□□□□ -1.63
CNTNAP3BQ96NU0 AC002545.1-201ENST00000592511 181 ntBASIC4.87□□□□□ -1.63
CNTNAP3BQ96NU0 ARF4P1-201ENST00000605447 541 ntBASIC4.87□□□□□ -1.63
CNTNAP3BQ96NU0 U7.2-201ENST00000607576 63 ntBASIC4.87□□□□□ -1.63
CNTNAP3BQ96NU0 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.87□□□□□ -1.63
CNTNAP3BQ96NU0 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CNTNAP3BQ96NU0 ABCC13-202ENST00000463099 3842 ntBASIC4.87□□□□□ -1.63
CNTNAP3BQ96NU0 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
CNTNAP3BQ96NU0 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CNTNAP3BQ96NU0 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CNTNAP3BQ96NU0 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.86□□□□□ -1.63
CNTNAP3BQ96NU0 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
CNTNAP3BQ96NU0 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
CNTNAP3BQ96NU0 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
CNTNAP3BQ96NU0 Y_RNA.337-201ENST00000365312 102 ntBASIC4.86□□□□□ -1.63
CNTNAP3BQ96NU0 RNU6-32P-201ENST00000383948 107 ntBASIC4.86□□□□□ -1.63
CNTNAP3BQ96NU0 RNU6-1074P-201ENST00000383995 104 ntBASIC4.86□□□□□ -1.63
CNTNAP3BQ96NU0 RNU6-13P-201ENST00000384248 107 ntBASIC4.86□□□□□ -1.63
CNTNAP3BQ96NU0 RNU6-12P-201ENST00000384604 107 ntBASIC4.86□□□□□ -1.63
CNTNAP3BQ96NU0 RNU6-41P-201ENST00000384741 107 ntBASIC4.86□□□□□ -1.63
CNTNAP3BQ96NU0 SNORA26.2-201ENST00000390922 122 ntBASIC4.86□□□□□ -1.63
CNTNAP3BQ96NU0 PTMAP2-201ENST00000397627 327 ntBASIC4.86□□□□□ -1.63
CNTNAP3BQ96NU0 MIR1182-201ENST00000408363 97 ntBASIC4.86□□□□□ -1.63
CNTNAP3BQ96NU0 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.86□□□□□ -1.63
CNTNAP3BQ96NU0 AC096638.1-201ENST00000444678 216 ntBASIC4.86□□□□□ -1.63
CNTNAP3BQ96NU0 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.86□□□□□ -1.63
CNTNAP3BQ96NU0 RPS20P10-201ENST00000451209 253 ntBASIC4.86□□□□□ -1.63
CNTNAP3BQ96NU0 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4.86□□□□□ -1.63
CNTNAP3BQ96NU0 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.86□□□□□ -1.63
CNTNAP3BQ96NU0 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.86□□□□□ -1.63
CNTNAP3BQ96NU0 AC100767.1-201ENST00000528178 123 ntBASIC4.86□□□□□ -1.63
CNTNAP3BQ96NU0 AC005476.1-201ENST00000554427 397 ntBASIC4.86□□□□□ -1.63
CNTNAP3BQ96NU0 AC022968.1-201ENST00000567372 442 ntBASIC4.86□□□□□ -1.63
CNTNAP3BQ96NU0 MIR4744-201ENST00000581563 82 ntBASIC4.86□□□□□ -1.63
CNTNAP3BQ96NU0 AC022441.3-201ENST00000605737 136 ntBASIC4.86□□□□□ -1.63
CNTNAP3BQ96NU0 AC069200.1-201ENST00000609511 323 ntBASIC4.86□□□□□ -1.63
CNTNAP3BQ96NU0 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.86□□□□□ -1.63
CNTNAP3BQ96NU0 RMST_6.1-201ENST00000611980 203 ntBASIC4.86□□□□□ -1.63
CNTNAP3BQ96NU0 AC090617.7-201ENST00000623952 126 ntBASIC4.86□□□□□ -1.63
CNTNAP3BQ96NU0 RNA5SP196-201ENST00000625967 102 ntBASIC4.86□□□□□ -1.63
CNTNAP3BQ96NU0 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.86□□□□□ -1.63
CNTNAP3BQ96NU0 AC068647.2-201ENST00000637380 353 ntBASIC4.86□□□□□ -1.63
CNTNAP3BQ96NU0 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CNTNAP3BQ96NU0 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CNTNAP3BQ96NU0 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CNTNAP3BQ96NU0 AC008079.2-201ENST00000623543 20396 ntBASIC4.86□□□□□ -1.63
CNTNAP3BQ96NU0 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
CNTNAP3BQ96NU0 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CNTNAP3BQ96NU0 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CNTNAP3BQ96NU0 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CNTNAP3BQ96NU0 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.85□□□□□ -1.63
CNTNAP3BQ96NU0 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
CNTNAP3BQ96NU0 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CNTNAP3BQ96NU0 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
CNTNAP3BQ96NU0 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.85□□□□□ -1.63
CNTNAP3BQ96NU0 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.85□□□□□ -1.63
CNTNAP3BQ96NU0 LINC01109-201ENST00000603837 3081 ntBASIC4.85□□□□□ -1.63
CNTNAP3BQ96NU0 SNORA63.1-201ENST00000362493 131 ntBASIC4.85□□□□□ -1.63
CNTNAP3BQ96NU0 U3.3-201ENST00000362986 216 ntBASIC4.85□□□□□ -1.63
CNTNAP3BQ96NU0 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.85□□□□□ -1.63
CNTNAP3BQ96NU0 SNORA66-201ENST00000384792 133 ntBASIC4.85□□□□□ -1.63
CNTNAP3BQ96NU0 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.85□□□□□ -1.63
CNTNAP3BQ96NU0 RPL23AP75-201ENST00000491601 451 ntBASIC4.85□□□□□ -1.63
CNTNAP3BQ96NU0 AP001328.1-201ENST00000528550 176 ntBASIC4.85□□□□□ -1.63
CNTNAP3BQ96NU0 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC4.85□□□□□ -1.63
CNTNAP3BQ96NU0 AC090877.1-201ENST00000561418 344 ntBASIC4.85□□□□□ -1.63
CNTNAP3BQ96NU0 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.85□□□□□ -1.63
CNTNAP3BQ96NU0 MIR4782-201ENST00000577987 79 ntBASIC4.85□□□□□ -1.63
CNTNAP3BQ96NU0 LARP7P3-201ENST00000579888 337 ntBASIC4.85□□□□□ -1.63
CNTNAP3BQ96NU0 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.85□□□□□ -1.63
CNTNAP3BQ96NU0 AC008739.3-201ENST00000603262 127 ntBASIC4.85□□□□□ -1.63
CNTNAP3BQ96NU0 AL139395.1-201ENST00000603662 160 ntBASIC4.85□□□□□ -1.63
CNTNAP3BQ96NU0 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC4.85□□□□□ -1.63
CNTNAP3BQ96NU0 AL161629.2-201ENST00000615347 275 ntBASIC4.85□□□□□ -1.63
CNTNAP3BQ96NU0 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.85□□□□□ -1.63
CNTNAP3BQ96NU0 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.85□□□□□ -1.63
CNTNAP3BQ96NU0 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CNTNAP3BQ96NU0 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.85□□□□□ -1.63
CNTNAP3BQ96NU0 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CNTNAP3BQ96NU0 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CNTNAP3BQ96NU0 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CNTNAP3BQ96NU0 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.85□□□□□ -1.63
CNTNAP3BQ96NU0 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CNTNAP3BQ96NU0 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CNTNAP3BQ96NU0 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CNTNAP3BQ96NU0 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.84□□□□□ -1.63
CNTNAP3BQ96NU0 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
CNTNAP3BQ96NU0 AL360270.2-201ENST00000562952 5985 ntBASIC4.84□□□□□ -1.63
CNTNAP3BQ96NU0 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
CNTNAP3BQ96NU0 MIR412-201ENST00000362142 91 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms