Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 AC040174.2-201ENST00000602701 465 ntBASIC0.18□□□□□ -2.38
CFAP54Q96N23 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.18□□□□□ -2.38
CFAP54Q96N23 AC091925.2-201ENST00000625059 256 ntBASIC0.18□□□□□ -2.38
CFAP54Q96N23 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC0.18□□□□□ -2.38
CFAP54Q96N23 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
CFAP54Q96N23 Y_RNA.559-201ENST00000384686 107 ntBASIC0.17□□□□□ -2.38
CFAP54Q96N23 AC010301.1-201ENST00000473936 355 ntBASIC0.17□□□□□ -2.38
CFAP54Q96N23 RNU7-193P-201ENST00000516723 65 ntBASIC0.17□□□□□ -2.38
CFAP54Q96N23 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC0.17□□□□□ -2.38
CFAP54Q96N23 GDI2P1-201ENST00000429312 1336 ntBASIC0.17□□□□□ -2.38
CFAP54Q96N23 Y_RNA.495-201ENST00000384435 112 ntBASIC0.17□□□□□ -2.38
CFAP54Q96N23 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.17□□□□□ -2.38
CFAP54Q96N23 PIGFP2-201ENST00000421400 651 ntBASIC0.17□□□□□ -2.38
CFAP54Q96N23 TRAPPC2P4-201ENST00000421750 331 ntBASIC0.17□□□□□ -2.38
CFAP54Q96N23 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.17□□□□□ -2.38
CFAP54Q96N23 RNU6-775P-201ENST00000459318 96 ntBASIC0.17□□□□□ -2.38
CFAP54Q96N23 CENPUP2-201ENST00000555897 1186 ntBASIC0.17□□□□□ -2.38
CFAP54Q96N23 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC0.17□□□□□ -2.38
CFAP54Q96N23 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
CFAP54Q96N23 RNU4-9P-201ENST00000364951 139 ntBASIC0.17□□□□□ -2.38
CFAP54Q96N23 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.17□□□□□ -2.38
CFAP54Q96N23 RPL21P111-201ENST00000418453 477 ntBASIC0.17□□□□□ -2.38
CFAP54Q96N23 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC0.17□□□□□ -2.38
CFAP54Q96N23 RNU7-26P-201ENST00000458980 63 ntBASIC0.17□□□□□ -2.38
CFAP54Q96N23 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.17□□□□□ -2.38
CFAP54Q96N23 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC0.17□□□□□ -2.38
CFAP54Q96N23 RNU6-1004P-201ENST00000516584 111 ntBASIC0.17□□□□□ -2.38
CFAP54Q96N23 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.17□□□□□ -2.38
CFAP54Q96N23 AP001893.2-201ENST00000526949 202 ntBASIC0.17□□□□□ -2.38
CFAP54Q96N23 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.17□□□□□ -2.38
CFAP54Q96N23 NIFKP6-201ENST00000598115 845 ntBASIC0.17□□□□□ -2.38
CFAP54Q96N23 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.17□□□□□ -2.38
CFAP54Q96N23 FAM157B-203ENST00000639350 358 ntBASIC0.17□□□□□ -2.38
CFAP54Q96N23 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.16□□□□□ -2.38
CFAP54Q96N23 AC115085.1-201ENST00000588924 229 ntBASIC0.16□□□□□ -2.38
CFAP54Q96N23 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.16□□□□□ -2.38
CFAP54Q96N23 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC0.16□□□□□ -2.38
CFAP54Q96N23 CCNG1P1-201ENST00000406783 885 ntBASIC0.16□□□□□ -2.38
CFAP54Q96N23 RNU2-64P-201ENST00000411315 191 ntBASIC0.16□□□□□ -2.38
CFAP54Q96N23 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.16□□□□□ -2.38
CFAP54Q96N23 RPL21P47-201ENST00000483696 477 ntBASIC0.16□□□□□ -2.38
CFAP54Q96N23 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC0.16□□□□□ -2.38
CFAP54Q96N23 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.16□□□□□ -2.38
CFAP54Q96N23 AC087272.1-201ENST00000523624 533 ntBASIC0.16□□□□□ -2.38
CFAP54Q96N23 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.16□□□□□ -2.38
CFAP54Q96N23 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.16□□□□□ -2.38
CFAP54Q96N23 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.15□□□□□ -2.38
CFAP54Q96N23 RNU4-32P-201ENST00000363404 141 ntBASIC0.15□□□□□ -2.38
CFAP54Q96N23 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC0.15□□□□□ -2.38
CFAP54Q96N23 MTND4P16-201ENST00000466108 1367 ntBASIC0.15□□□□□ -2.39
CFAP54Q96N23 Y_RNA.514-201ENST00000384528 112 ntBASIC0.15□□□□□ -2.39
CFAP54Q96N23 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC0.15□□□□□ -2.39
CFAP54Q96N23 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.15□□□□□ -2.39
CFAP54Q96N23 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC0.15□□□□□ -2.39
CFAP54Q96N23 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0.15□□□□□ -2.39
CFAP54Q96N23 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC0.15□□□□□ -2.39
CFAP54Q96N23 MIR4667-201ENST00000578933 66 ntBASIC0.15□□□□□ -2.39
CFAP54Q96N23 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC0.15□□□□□ -2.39
CFAP54Q96N23 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.15□□□□□ -2.39
CFAP54Q96N23 AC004987.4-201ENST00000603383 338 ntBASIC0.15□□□□□ -2.39
CFAP54Q96N23 uc_338.17-201ENST00000619633 179 ntBASIC0.15□□□□□ -2.39
CFAP54Q96N23 RNF2P1-201ENST00000442955 1010 ntBASIC0.15□□□□□ -2.39
CFAP54Q96N23 AC016717.1-201ENST00000448918 286 ntBASIC0.15□□□□□ -2.39
CFAP54Q96N23 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.15□□□□□ -2.39
CFAP54Q96N23 RN7SKP34-201ENST00000516142 244 ntBASIC0.15□□□□□ -2.39
CFAP54Q96N23 AL158211.1-201ENST00000566763 763 ntBASIC0.15□□□□□ -2.39
CFAP54Q96N23 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC0.15□□□□□ -2.39
CFAP54Q96N23 AC021171.1-201ENST00000603137 706 ntBASIC0.15□□□□□ -2.39
CFAP54Q96N23 HSPE1P19-201ENST00000603327 295 ntBASIC0.15□□□□□ -2.39
CFAP54Q96N23 MIR6516-201ENST00000630554 81 ntBASIC0.15□□□□□ -2.39
CFAP54Q96N23 RNU6-335P-201ENST00000364563 113 ntBASIC0.14□□□□□ -2.39
CFAP54Q96N23 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.14□□□□□ -2.39
CFAP54Q96N23 AC009518.2-201ENST00000418056 731 ntBASIC0.14□□□□□ -2.39
CFAP54Q96N23 ANKRD26P4-201ENST00000455755 950 ntBASIC0.14□□□□□ -2.39
CFAP54Q96N23 RNA5SP165-201ENST00000517142 115 ntBASIC0.14□□□□□ -2.39
CFAP54Q96N23 MIR378F-201ENST00000578143 78 ntBASIC0.14□□□□□ -2.39
CFAP54Q96N23 AP001269.3-201ENST00000588718 329 ntBASIC0.14□□□□□ -2.39
CFAP54Q96N23 FRG1HP-204ENST00000617940 757 ntBASIC0.14□□□□□ -2.39
CFAP54Q96N23 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC0.14□□□□□ -2.39
CFAP54Q96N23 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC0.14□□□□□ -2.39
CFAP54Q96N23 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.14□□□□□ -2.39
CFAP54Q96N23 AC015849.6-201ENST00000605454 474 ntBASIC0.14□□□□□ -2.39
CFAP54Q96N23 MIR7515-201ENST00000637837 67 ntBASIC0.14□□□□□ -2.39
CFAP54Q96N23 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.13□□□□□ -2.39
CFAP54Q96N23 SSR1P1-201ENST00000407630 814 ntBASIC0.13□□□□□ -2.39
CFAP54Q96N23 RPL7P30-201ENST00000420888 709 ntBASIC0.13□□□□□ -2.39
CFAP54Q96N23 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.13□□□□□ -2.39
CFAP54Q96N23 AC092634.2-201ENST00000428146 1010 ntBASIC0.13□□□□□ -2.39
CFAP54Q96N23 AL353898.1-201ENST00000444055 238 ntBASIC0.13□□□□□ -2.39
CFAP54Q96N23 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC0.13□□□□□ -2.39
CFAP54Q96N23 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.13□□□□□ -2.39
CFAP54Q96N23 AP003049.1-201ENST00000529418 457 ntBASIC0.13□□□□□ -2.39
CFAP54Q96N23 COX6CP3-201ENST00000580869 223 ntBASIC0.13□□□□□ -2.39
CFAP54Q96N23 RNU6-349P-201ENST00000362402 107 ntBASIC0.13□□□□□ -2.39
CFAP54Q96N23 SNORD49B-201ENST00000365172 72 ntBASIC0.13□□□□□ -2.39
CFAP54Q96N23 Y_RNA.583-201ENST00000391033 113 ntBASIC0.13□□□□□ -2.39
CFAP54Q96N23 RPL36AP53-201ENST00000432891 316 ntBASIC0.13□□□□□ -2.39
CFAP54Q96N23 RNU6-889P-201ENST00000517189 103 ntBASIC0.13□□□□□ -2.39
CFAP54Q96N23 LY96-202ENST00000518893 430 ntTSL 3 BASIC0.13□□□□□ -2.39
CFAP54Q96N23 AC090616.5-202ENST00000582111 297 ntBASIC0.13□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms