Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.56□□□□□ -2
CCDC7Q96M83 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.56□□□□□ -2
CCDC7Q96M83 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.56□□□□□ -2
CCDC7Q96M83 RN7SKP258-201ENST00000517151 304 ntBASIC2.56□□□□□ -2
CCDC7Q96M83 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
CCDC7Q96M83 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.56□□□□□ -2
CCDC7Q96M83 AL356432.3-201ENST00000568952 465 ntBASIC2.56□□□□□ -2
CCDC7Q96M83 MIR4293-201ENST00000584305 78 ntBASIC2.56□□□□□ -2
CCDC7Q96M83 AL355877.2-201ENST00000603670 358 ntBASIC2.56□□□□□ -2
CCDC7Q96M83 AC010678.1-201ENST00000614118 713 ntBASIC2.56□□□□□ -2
CCDC7Q96M83 AC023510.2-201ENST00000622162 746 ntBASIC2.56□□□□□ -2
CCDC7Q96M83 AC092192.1-201ENST00000633154 1018 ntBASIC2.56□□□□□ -2
CCDC7Q96M83 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
CCDC7Q96M83 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.55□□□□□ -2
CCDC7Q96M83 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CCDC7Q96M83 MIR378A-201ENST00000362177 66 ntBASIC2.55□□□□□ -2
CCDC7Q96M83 Y_RNA.97-201ENST00000363094 102 ntBASIC2.55□□□□□ -2
CCDC7Q96M83 RNU6-457P-201ENST00000363999 107 ntBASIC2.55□□□□□ -2
CCDC7Q96M83 RNU6-321P-201ENST00000410912 106 ntBASIC2.55□□□□□ -2
CCDC7Q96M83 AL358453.1-201ENST00000422522 250 ntBASIC2.55□□□□□ -2
CCDC7Q96M83 RPS27AP14-201ENST00000422868 454 ntBASIC2.55□□□□□ -2
CCDC7Q96M83 Z82205.1-201ENST00000428456 297 ntBASIC2.55□□□□□ -2
CCDC7Q96M83 GTF2IP20-201ENST00000431663 360 ntBASIC2.55□□□□□ -2
CCDC7Q96M83 RPL37P21-201ENST00000435890 276 ntBASIC2.55□□□□□ -2
CCDC7Q96M83 TIMM9P1-201ENST00000436122 256 ntBASIC2.55□□□□□ -2
CCDC7Q96M83 RPS15AP27-201ENST00000449183 343 ntBASIC2.55□□□□□ -2
CCDC7Q96M83 RPL37P6-201ENST00000460682 294 ntBASIC2.55□□□□□ -2
CCDC7Q96M83 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.55□□□□□ -2
CCDC7Q96M83 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.55□□□□□ -2
CCDC7Q96M83 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.55□□□□□ -2
CCDC7Q96M83 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.55□□□□□ -2
CCDC7Q96M83 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.55□□□□□ -2
CCDC7Q96M83 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.55□□□□□ -2
CCDC7Q96M83 MIR4448-201ENST00000584360 86 ntBASIC2.55□□□□□ -2
CCDC7Q96M83 AC005498.1-201ENST00000592125 465 ntBASIC2.55□□□□□ -2
CCDC7Q96M83 AC004805.2-201ENST00000605382 482 ntBASIC2.55□□□□□ -2
CCDC7Q96M83 AC008498.1-201ENST00000613012 531 ntBASIC2.55□□□□□ -2
CCDC7Q96M83 RNU6-1167P-201ENST00000363227 94 ntBASIC2.54□□□□□ -2
CCDC7Q96M83 RNU6-809P-201ENST00000384461 107 ntBASIC2.54□□□□□ -2
CCDC7Q96M83 MIR888-201ENST00000401186 77 ntBASIC2.54□□□□□ -2
CCDC7Q96M83 RPS20P2-201ENST00000402520 389 ntBASIC2.54□□□□□ -2
CCDC7Q96M83 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.54□□□□□ -2
CCDC7Q96M83 AC011233.1-201ENST00000422812 283 ntBASIC2.54□□□□□ -2
CCDC7Q96M83 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC2.54□□□□□ -2
CCDC7Q96M83 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.54□□□□□ -2
CCDC7Q96M83 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.54□□□□□ -2
CCDC7Q96M83 SNRPEP9-201ENST00000436794 238 ntBASIC2.54□□□□□ -2
CCDC7Q96M83 USP9YP15-201ENST00000442391 422 ntBASIC2.54□□□□□ -2
CCDC7Q96M83 GDI2P2-201ENST00000445131 608 ntBASIC2.54□□□□□ -2
CCDC7Q96M83 CECR9-201ENST00000453421 199 ntBASIC2.54□□□□□ -2
CCDC7Q96M83 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
CCDC7Q96M83 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.54□□□□□ -2
CCDC7Q96M83 RN7SKP287-201ENST00000516546 266 ntBASIC2.54□□□□□ -2
CCDC7Q96M83 RNA5SP82-201ENST00000516707 92 ntBASIC2.54□□□□□ -2
CCDC7Q96M83 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.54□□□□□ -2
CCDC7Q96M83 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.54□□□□□ -2
CCDC7Q96M83 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.54□□□□□ -2
CCDC7Q96M83 AC002400.1-201ENST00000569310 726 ntBASIC2.54□□□□□ -2
CCDC7Q96M83 AC010546.1-201ENST00000569391 485 ntBASIC2.54□□□□□ -2
CCDC7Q96M83 MIR4255-201ENST00000579351 72 ntBASIC2.54□□□□□ -2
CCDC7Q96M83 VN1R80P-201ENST00000597126 338 ntBASIC2.54□□□□□ -2
CCDC7Q96M83 AP001981.2-201ENST00000603241 418 ntBASIC2.54□□□□□ -2
CCDC7Q96M83 AC093424.1-201ENST00000604999 338 ntBASIC2.54□□□□□ -2
CCDC7Q96M83 ZNF519P1-201ENST00000449011 1626 ntBASIC2.53□□□□□ -2
CCDC7Q96M83 RNU6-1284P-201ENST00000363701 100 ntBASIC2.53□□□□□ -2
CCDC7Q96M83 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.53□□□□□ -2
CCDC7Q96M83 MIR1287-201ENST00000408492 90 ntBASIC2.53□□□□□ -2
CCDC7Q96M83 ELOCP17-201ENST00000414751 326 ntBASIC2.53□□□□□ -2
CCDC7Q96M83 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.53□□□□□ -2
CCDC7Q96M83 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.53□□□□□ -2
CCDC7Q96M83 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.53□□□□□ -2
CCDC7Q96M83 AL593851.1-201ENST00000426171 157 ntBASIC2.53□□□□□ -2
CCDC7Q96M83 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC2.53□□□□□ -2
CCDC7Q96M83 ELOCP14-201ENST00000428070 331 ntBASIC2.53□□□□□ -2
CCDC7Q96M83 RPL22P17-201ENST00000438729 315 ntBASIC2.53□□□□□ -2
CCDC7Q96M83 ELOCP7-201ENST00000439968 331 ntBASIC2.53□□□□□ -2
CCDC7Q96M83 UBBP3-201ENST00000445497 241 ntBASIC2.53□□□□□ -2
CCDC7Q96M83 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.53□□□□□ -2
CCDC7Q96M83 RPL31P41-201ENST00000477967 372 ntBASIC2.53□□□□□ -2
CCDC7Q96M83 AC090096.1-201ENST00000489168 390 ntBASIC2.53□□□□□ -2
CCDC7Q96M83 MRPS36P2-201ENST00000512569 299 ntBASIC2.53□□□□□ -2
CCDC7Q96M83 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.53□□□□□ -2
CCDC7Q96M83 RNU6-1003P-201ENST00000517099 105 ntBASIC2.53□□□□□ -2
CCDC7Q96M83 IGLV3-17-201ENST00000519099 244 ntBASIC2.53□□□□□ -2
CCDC7Q96M83 AC123904.2-201ENST00000548059 300 ntBASIC2.53□□□□□ -2
CCDC7Q96M83 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.53□□□□□ -2
CCDC7Q96M83 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.53□□□□□ -2
CCDC7Q96M83 AC008751.2-201ENST00000597885 980 ntBASIC2.53□□□□□ -2
CCDC7Q96M83 AP000403.1-201ENST00000603349 851 ntBASIC2.53□□□□□ -2
CCDC7Q96M83 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.53□□□□□ -2
CCDC7Q96M83 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.53□□□□□ -2
CCDC7Q96M83 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.53□□□□□ -2
CCDC7Q96M83 AC138915.1-201ENST00000565427 1685 ntBASIC2.53□□□□□ -2
CCDC7Q96M83 PABPC1P9-201ENST00000426076 1612 ntBASIC2.52□□□□□ -2.01
CCDC7Q96M83 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.52□□□□□ -2.01
CCDC7Q96M83 SNORA16.1-201ENST00000364597 132 ntBASIC2.52□□□□□ -2.01
CCDC7Q96M83 MIR1294-201ENST00000408503 142 ntBASIC2.52□□□□□ -2.01
CCDC7Q96M83 AL358075.3-201ENST00000426289 226 ntBASIC2.52□□□□□ -2.01
CCDC7Q96M83 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.52□□□□□ -2.01
CCDC7Q96M83 MTND1P28-201ENST00000435623 950 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms