Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RTP4Q96DX8 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
RTP4Q96DX8 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.13□□□□□ -1.91
RTP4Q96DX8 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.13□□□□□ -1.91
RTP4Q96DX8 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RTP4Q96DX8 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.13□□□□□ -1.91
RTP4Q96DX8 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RTP4Q96DX8 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
RTP4Q96DX8 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RTP4Q96DX8 RNU6-1287P-201ENST00000362914 107 ntBASIC3.13□□□□□ -1.91
RTP4Q96DX8 RNU6-1060P-201ENST00000384664 107 ntBASIC3.13□□□□□ -1.91
RTP4Q96DX8 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RTP4Q96DX8 RNA5SP274-201ENST00000410484 108 ntBASIC3.13□□□□□ -1.91
RTP4Q96DX8 AC009161.1-201ENST00000417306 376 ntBASIC3.13□□□□□ -1.91
RTP4Q96DX8 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.13□□□□□ -1.91
RTP4Q96DX8 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.13□□□□□ -1.91
RTP4Q96DX8 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.13□□□□□ -1.91
RTP4Q96DX8 HMGB1P18-201ENST00000438801 619 ntBASIC3.13□□□□□ -1.91
RTP4Q96DX8 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.13□□□□□ -1.91
RTP4Q96DX8 SNRPFP3-201ENST00000457792 225 ntBASIC3.13□□□□□ -1.91
RTP4Q96DX8 snoU13.4-201ENST00000458916 104 ntBASIC3.13□□□□□ -1.91
RTP4Q96DX8 AC006445.1-201ENST00000491925 405 ntBASIC3.13□□□□□ -1.91
RTP4Q96DX8 MLLT10P2-201ENST00000506434 249 ntBASIC3.13□□□□□ -1.91
RTP4Q96DX8 FTH1P9-201ENST00000513251 355 ntBASIC3.13□□□□□ -1.91
RTP4Q96DX8 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.13□□□□□ -1.91
RTP4Q96DX8 RNU6-123P-201ENST00000516163 102 ntBASIC3.13□□□□□ -1.91
RTP4Q96DX8 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.13□□□□□ -1.91
RTP4Q96DX8 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.13□□□□□ -1.91
RTP4Q96DX8 FAM60BP-201ENST00000578364 658 ntBASIC3.13□□□□□ -1.91
RTP4Q96DX8 MIR5047-201ENST00000579212 100 ntBASIC3.13□□□□□ -1.91
RTP4Q96DX8 MIR3942-201ENST00000585264 109 ntBASIC3.13□□□□□ -1.91
RTP4Q96DX8 BNIP3P25-201ENST00000596023 559 ntBASIC3.13□□□□□ -1.91
RTP4Q96DX8 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.13□□□□□ -1.91
RTP4Q96DX8 AC130324.3-201ENST00000614165 542 ntBASIC3.13□□□□□ -1.91
RTP4Q96DX8 AC093913.1-201ENST00000614178 329 ntBASIC3.13□□□□□ -1.91
RTP4Q96DX8 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
RTP4Q96DX8 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.13□□□□□ -1.91
RTP4Q96DX8 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.13□□□□□ -1.91
RTP4Q96DX8 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
RTP4Q96DX8 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RTP4Q96DX8 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.13□□□□□ -1.91
RTP4Q96DX8 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RTP4Q96DX8 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RTP4Q96DX8 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
RTP4Q96DX8 AC010733.2-201ENST00000589496 5702 ntBASIC3.12□□□□□ -1.91
RTP4Q96DX8 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.12□□□□□ -1.91
RTP4Q96DX8 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.12□□□□□ -1.91
RTP4Q96DX8 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RTP4Q96DX8 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
RTP4Q96DX8 U3.12-201ENST00000364498 214 ntBASIC3.12□□□□□ -1.91
RTP4Q96DX8 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.12□□□□□ -1.91
RTP4Q96DX8 U3.26-201ENST00000391236 204 ntBASIC3.12□□□□□ -1.91
RTP4Q96DX8 RNU6-510P-201ENST00000391239 108 ntBASIC3.12□□□□□ -1.91
RTP4Q96DX8 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.12□□□□□ -1.91
RTP4Q96DX8 OR6C66P-201ENST00000414917 930 ntBASIC3.12□□□□□ -1.91
RTP4Q96DX8 CALM2P2-201ENST00000428512 440 ntBASIC3.12□□□□□ -1.91
RTP4Q96DX8 RPL36AP6-201ENST00000435770 321 ntBASIC3.12□□□□□ -1.91
RTP4Q96DX8 RPL26P6-201ENST00000440913 438 ntBASIC3.12□□□□□ -1.91
RTP4Q96DX8 PPP1R2P5-201ENST00000457256 603 ntBASIC3.12□□□□□ -1.91
RTP4Q96DX8 RN7SL330P-201ENST00000469709 307 ntBASIC3.12□□□□□ -1.91
RTP4Q96DX8 AC092451.1-201ENST00000480211 153 ntBASIC3.12□□□□□ -1.91
RTP4Q96DX8 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.12□□□□□ -1.91
RTP4Q96DX8 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.12□□□□□ -1.91
RTP4Q96DX8 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.12□□□□□ -1.91
RTP4Q96DX8 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.12□□□□□ -1.91
RTP4Q96DX8 UBL5P2-201ENST00000583788 219 ntBASIC3.12□□□□□ -1.91
RTP4Q96DX8 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.12□□□□□ -1.91
RTP4Q96DX8 AC007687.1-201ENST00000602704 304 ntBASIC3.12□□□□□ -1.91
RTP4Q96DX8 AL137843.1-201ENST00000605078 385 ntBASIC3.12□□□□□ -1.91
RTP4Q96DX8 uc_338.5-201ENST00000611839 155 ntBASIC3.12□□□□□ -1.91
RTP4Q96DX8 AL355810.1-201ENST00000614629 552 ntBASIC3.12□□□□□ -1.91
RTP4Q96DX8 AL360181.4-201ENST00000621752 134 ntBASIC3.12□□□□□ -1.91
RTP4Q96DX8 AC099506.2-201ENST00000623074 221 ntBASIC3.12□□□□□ -1.91
RTP4Q96DX8 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
RTP4Q96DX8 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RTP4Q96DX8 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RTP4Q96DX8 AC008264.2-201ENST00000610193 3731 ntBASIC3.12□□□□□ -1.91
RTP4Q96DX8 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RTP4Q96DX8 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
RTP4Q96DX8 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.11□□□□□ -1.91
RTP4Q96DX8 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
RTP4Q96DX8 MIR422A-201ENST00000362286 90 ntBASIC3.11□□□□□ -1.91
RTP4Q96DX8 RNU6-1252P-201ENST00000363054 104 ntBASIC3.11□□□□□ -1.91
RTP4Q96DX8 Y_RNA.301-201ENST00000364990 103 ntBASIC3.11□□□□□ -1.91
RTP4Q96DX8 SNORD6-201ENST00000365444 73 ntBASIC3.11□□□□□ -1.91
RTP4Q96DX8 XGY1-201ENST00000381172 446 ntBASIC3.11□□□□□ -1.91
RTP4Q96DX8 RNU6-116P-201ENST00000384042 109 ntBASIC3.11□□□□□ -1.91
RTP4Q96DX8 SNORD67-201ENST00000390833 111 ntBASIC3.11□□□□□ -1.91
RTP4Q96DX8 EI24P2-201ENST00000397776 1076 ntBASIC3.11□□□□□ -1.91
RTP4Q96DX8 HSPE1P26-201ENST00000405341 275 ntBASIC3.11□□□□□ -1.91
RTP4Q96DX8 TXNP7-201ENST00000406296 293 ntBASIC3.11□□□□□ -1.91
RTP4Q96DX8 FAT1P1-201ENST00000406588 507 ntBASIC3.11□□□□□ -1.91
RTP4Q96DX8 RNU2-37P-201ENST00000410695 177 ntBASIC3.11□□□□□ -1.91
RTP4Q96DX8 RPS20P15-201ENST00000412792 311 ntBASIC3.11□□□□□ -1.91
RTP4Q96DX8 HSPE1P1-201ENST00000421494 318 ntBASIC3.11□□□□□ -1.91
RTP4Q96DX8 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.11□□□□□ -1.91
RTP4Q96DX8 RNU6-1208P-201ENST00000459588 107 ntBASIC3.11□□□□□ -1.91
RTP4Q96DX8 RPL23AP11-201ENST00000475260 469 ntBASIC3.11□□□□□ -1.91
RTP4Q96DX8 RN7SL633P-201ENST00000488974 297 ntBASIC3.11□□□□□ -1.91
RTP4Q96DX8 RNU6-685P-201ENST00000517088 95 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms