Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.98□□□□□ -2.09
ECHDC3Q96DC8 MIR3167-201ENST00000579623 85 ntBASIC1.98□□□□□ -2.09
ECHDC3Q96DC8 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.98□□□□□ -2.09
ECHDC3Q96DC8 AC002984.1-201ENST00000591692 448 ntBASIC1.98□□□□□ -2.09
ECHDC3Q96DC8 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.98□□□□□ -2.09
ECHDC3Q96DC8 AC013244.3-201ENST00000605614 388 ntBASIC1.98□□□□□ -2.09
ECHDC3Q96DC8 AC091965.4-201ENST00000607691 587 ntBASIC1.98□□□□□ -2.09
ECHDC3Q96DC8 AL391834.2-201ENST00000609982 546 ntBASIC1.98□□□□□ -2.09
ECHDC3Q96DC8 AC009318.2-201ENST00000610917 651 ntBASIC1.98□□□□□ -2.09
ECHDC3Q96DC8 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
ECHDC3Q96DC8 AC098657.3-201ENST00000620434 263 ntBASIC1.98□□□□□ -2.09
ECHDC3Q96DC8 AP000553.5-201ENST00000641933 54 ntBASIC1.98□□□□□ -2.09
ECHDC3Q96DC8 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
ECHDC3Q96DC8 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.98□□□□□ -2.09
ECHDC3Q96DC8 KPNA2P1-201ENST00000458289 1591 ntBASIC1.98□□□□□ -2.09
ECHDC3Q96DC8 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
ECHDC3Q96DC8 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
ECHDC3Q96DC8 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.97□□□□□ -2.09
ECHDC3Q96DC8 RNU6-486P-201ENST00000363116 107 ntBASIC1.97□□□□□ -2.09
ECHDC3Q96DC8 RNU6-19P-201ENST00000384718 107 ntBASIC1.97□□□□□ -2.09
ECHDC3Q96DC8 RNU6-278P-201ENST00000390945 109 ntBASIC1.97□□□□□ -2.09
ECHDC3Q96DC8 SNORA46.1-201ENST00000391069 153 ntBASIC1.97□□□□□ -2.09
ECHDC3Q96DC8 RNU6-817P-201ENST00000391083 104 ntBASIC1.97□□□□□ -2.09
ECHDC3Q96DC8 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.97□□□□□ -2.09
ECHDC3Q96DC8 AL356379.1-201ENST00000414105 126 ntBASIC1.97□□□□□ -2.09
ECHDC3Q96DC8 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.97□□□□□ -2.09
ECHDC3Q96DC8 MTCO2P23-201ENST00000425216 680 ntBASIC1.97□□□□□ -2.09
ECHDC3Q96DC8 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.97□□□□□ -2.09
ECHDC3Q96DC8 PTGES3P4-201ENST00000426243 356 ntBASIC1.97□□□□□ -2.09
ECHDC3Q96DC8 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.97□□□□□ -2.09
ECHDC3Q96DC8 MTND1P32-201ENST00000433043 938 ntBASIC1.97□□□□□ -2.09
ECHDC3Q96DC8 HMGB3P12-201ENST00000438745 556 ntBASIC1.97□□□□□ -2.09
ECHDC3Q96DC8 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.97□□□□□ -2.09
ECHDC3Q96DC8 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.97□□□□□ -2.09
ECHDC3Q96DC8 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.97□□□□□ -2.09
ECHDC3Q96DC8 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.97□□□□□ -2.09
ECHDC3Q96DC8 RNU6-717P-201ENST00000459076 104 ntBASIC1.97□□□□□ -2.09
ECHDC3Q96DC8 AC068587.2-201ENST00000478386 781 ntBASIC1.97□□□□□ -2.09
ECHDC3Q96DC8 RPL39P36-201ENST00000490784 156 ntBASIC1.97□□□□□ -2.09
ECHDC3Q96DC8 HSPE1P23-201ENST00000509838 286 ntBASIC1.97□□□□□ -2.09
ECHDC3Q96DC8 AC009902.1-201ENST00000519351 183 ntBASIC1.97□□□□□ -2.09
ECHDC3Q96DC8 AC025755.1-201ENST00000521306 278 ntBASIC1.97□□□□□ -2.09
ECHDC3Q96DC8 AC084851.1-201ENST00000529105 249 ntBASIC1.97□□□□□ -2.09
ECHDC3Q96DC8 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.97□□□□□ -2.09
ECHDC3Q96DC8 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.97□□□□□ -2.09
ECHDC3Q96DC8 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.97□□□□□ -2.09
ECHDC3Q96DC8 AC007229.1-201ENST00000590455 412 ntBASIC1.97□□□□□ -2.09
ECHDC3Q96DC8 BNIP3P23-201ENST00000599655 511 ntBASIC1.97□□□□□ -2.09
ECHDC3Q96DC8 AL139418.1-201ENST00000613613 177 ntBASIC1.97□□□□□ -2.09
ECHDC3Q96DC8 AC022306.3-201ENST00000619930 550 ntBASIC1.97□□□□□ -2.09
ECHDC3Q96DC8 AC006927.4-201ENST00000639187 543 ntBASIC1.97□□□□□ -2.09
ECHDC3Q96DC8 RNU6-701P-201ENST00000384059 107 ntBASIC1.96□□□□□ -2.1
ECHDC3Q96DC8 RNU1-148P-201ENST00000384472 162 ntBASIC1.96□□□□□ -2.1
ECHDC3Q96DC8 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
ECHDC3Q96DC8 HMGB3P2-201ENST00000411913 584 ntBASIC1.96□□□□□ -2.1
ECHDC3Q96DC8 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.96□□□□□ -2.1
ECHDC3Q96DC8 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.96□□□□□ -2.1
ECHDC3Q96DC8 HMGB1P27-201ENST00000431429 603 ntBASIC1.96□□□□□ -2.1
ECHDC3Q96DC8 HMGN2P3-201ENST00000433603 273 ntBASIC1.96□□□□□ -2.1
ECHDC3Q96DC8 UBE2FP3-201ENST00000436366 524 ntBASIC1.96□□□□□ -2.1
ECHDC3Q96DC8 HMGN2P5-201ENST00000436882 273 ntBASIC1.96□□□□□ -2.1
ECHDC3Q96DC8 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
ECHDC3Q96DC8 AC004854.1-201ENST00000440356 349 ntBASIC1.96□□□□□ -2.1
ECHDC3Q96DC8 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.96□□□□□ -2.1
ECHDC3Q96DC8 RPL23AP35-201ENST00000451906 501 ntBASIC1.96□□□□□ -2.1
ECHDC3Q96DC8 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.96□□□□□ -2.1
ECHDC3Q96DC8 RPL37P6-201ENST00000460682 294 ntBASIC1.96□□□□□ -2.1
ECHDC3Q96DC8 AP001324.2-201ENST00000461163 319 ntBASIC1.96□□□□□ -2.1
ECHDC3Q96DC8 MTND3P3-201ENST00000505004 126 ntBASIC1.96□□□□□ -2.1
ECHDC3Q96DC8 AF213884.2-201ENST00000510417 903 ntBASIC1.96□□□□□ -2.1
ECHDC3Q96DC8 MRPS33P3-201ENST00000513456 322 ntBASIC1.96□□□□□ -2.1
ECHDC3Q96DC8 RNU1-40P-201ENST00000516816 164 ntBASIC1.96□□□□□ -2.1
ECHDC3Q96DC8 RNU1-97P-201ENST00000516872 164 ntBASIC1.96□□□□□ -2.1
ECHDC3Q96DC8 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
ECHDC3Q96DC8 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.96□□□□□ -2.1
ECHDC3Q96DC8 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.96□□□□□ -2.1
ECHDC3Q96DC8 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.96□□□□□ -2.1
ECHDC3Q96DC8 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.96□□□□□ -2.1
ECHDC3Q96DC8 AC118273.2-201ENST00000532092 465 ntBASIC1.96□□□□□ -2.1
ECHDC3Q96DC8 CBX3P7-201ENST00000532876 502 ntBASIC1.96□□□□□ -2.1
ECHDC3Q96DC8 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.96□□□□□ -2.1
ECHDC3Q96DC8 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
ECHDC3Q96DC8 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.96□□□□□ -2.1
ECHDC3Q96DC8 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.96□□□□□ -2.1
ECHDC3Q96DC8 MIR4307-201ENST00000582802 84 ntBASIC1.96□□□□□ -2.1
ECHDC3Q96DC8 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.96□□□□□ -2.1
ECHDC3Q96DC8 APOOP1-201ENST00000604695 592 ntBASIC1.96□□□□□ -2.1
ECHDC3Q96DC8 AC007363.1-201ENST00000604736 620 ntBASIC1.96□□□□□ -2.1
ECHDC3Q96DC8 AC009233.1-201ENST00000616477 371 ntBASIC1.96□□□□□ -2.1
ECHDC3Q96DC8 AL109620.1-201ENST00000618738 1197 ntBASIC1.96□□□□□ -2.1
ECHDC3Q96DC8 RNY4P24-201ENST00000362735 96 ntBASIC1.95□□□□□ -2.1
ECHDC3Q96DC8 RNU1-72P-201ENST00000362976 153 ntBASIC1.95□□□□□ -2.1
ECHDC3Q96DC8 RNU6-748P-201ENST00000384648 107 ntBASIC1.95□□□□□ -2.1
ECHDC3Q96DC8 MTCO2P8-201ENST00000412213 658 ntBASIC1.95□□□□□ -2.1
ECHDC3Q96DC8 AC106883.1-201ENST00000418805 562 ntBASIC1.95□□□□□ -2.1
ECHDC3Q96DC8 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.95□□□□□ -2.1
ECHDC3Q96DC8 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.95□□□□□ -2.1
ECHDC3Q96DC8 MTAPP1-201ENST00000489154 819 ntBASIC1.95□□□□□ -2.1
ECHDC3Q96DC8 AC018437.1-201ENST00000492214 406 ntBASIC1.95□□□□□ -2.1
ECHDC3Q96DC8 RNA5SP112-201ENST00000515937 99 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms