Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.95□□□□□ -1.78
CHMP4CQ96CF2 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.95□□□□□ -1.78
CHMP4CQ96CF2 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.95□□□□□ -1.78
CHMP4CQ96CF2 AC005476.1-201ENST00000554427 397 ntBASIC3.95□□□□□ -1.78
CHMP4CQ96CF2 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.95□□□□□ -1.78
CHMP4CQ96CF2 MIR4474-201ENST00000579189 78 ntBASIC3.95□□□□□ -1.78
CHMP4CQ96CF2 AL355598.1-201ENST00000604169 202 ntBASIC3.95□□□□□ -1.78
CHMP4CQ96CF2 U2.17-201ENST00000611454 95 ntBASIC3.95□□□□□ -1.78
CHMP4CQ96CF2 AP003400.5-201ENST00000624827 617 ntBASIC3.95□□□□□ -1.78
CHMP4CQ96CF2 AC073346.2-201ENST00000624724 2058 ntBASIC3.94□□□□□ -1.78
CHMP4CQ96CF2 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CHMP4CQ96CF2 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CHMP4CQ96CF2 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CHMP4CQ96CF2 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.94□□□□□ -1.78
CHMP4CQ96CF2 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
CHMP4CQ96CF2 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CHMP4CQ96CF2 CASC19-280ENST00000642102 1351 ntBASIC3.94□□□□□ -1.78
CHMP4CQ96CF2 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CHMP4CQ96CF2 RNU6-805P-201ENST00000365643 106 ntBASIC3.94□□□□□ -1.78
CHMP4CQ96CF2 AP002088.1-201ENST00000382740 395 ntBASIC3.94□□□□□ -1.78
CHMP4CQ96CF2 RNU6-1179P-201ENST00000384667 107 ntBASIC3.94□□□□□ -1.78
CHMP4CQ96CF2 MIR578-201ENST00000384828 96 ntBASIC3.94□□□□□ -1.78
CHMP4CQ96CF2 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CHMP4CQ96CF2 RNU6-876P-201ENST00000391295 104 ntBASIC3.94□□□□□ -1.78
CHMP4CQ96CF2 MIR888-201ENST00000401186 77 ntBASIC3.94□□□□□ -1.78
CHMP4CQ96CF2 RNU4-26P-201ENST00000410270 107 ntBASIC3.94□□□□□ -1.78
CHMP4CQ96CF2 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.94□□□□□ -1.78
CHMP4CQ96CF2 AC099548.1-201ENST00000421443 426 ntBASIC3.94□□□□□ -1.78
CHMP4CQ96CF2 MTND4LP11-201ENST00000422184 280 ntBASIC3.94□□□□□ -1.78
CHMP4CQ96CF2 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.94□□□□□ -1.78
CHMP4CQ96CF2 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.94□□□□□ -1.78
CHMP4CQ96CF2 MTCYBP18-201ENST00000501056 747 ntBASIC3.94□□□□□ -1.78
CHMP4CQ96CF2 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.94□□□□□ -1.78
CHMP4CQ96CF2 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.94□□□□□ -1.78
CHMP4CQ96CF2 AC025465.4-201ENST00000513422 638 ntBASIC3.94□□□□□ -1.78
CHMP4CQ96CF2 RN7SKP57-201ENST00000517248 293 ntBASIC3.94□□□□□ -1.78
CHMP4CQ96CF2 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.94□□□□□ -1.78
CHMP4CQ96CF2 AF235103.2-201ENST00000525753 346 ntBASIC3.94□□□□□ -1.78
CHMP4CQ96CF2 AP000867.2-201ENST00000532468 320 ntBASIC3.94□□□□□ -1.78
CHMP4CQ96CF2 AC078814.3-201ENST00000553036 491 ntBASIC3.94□□□□□ -1.78
CHMP4CQ96CF2 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.94□□□□□ -1.78
CHMP4CQ96CF2 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.94□□□□□ -1.78
CHMP4CQ96CF2 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.94□□□□□ -1.78
CHMP4CQ96CF2 RNU6-89P-201ENST00000606519 100 ntBASIC3.94□□□□□ -1.78
CHMP4CQ96CF2 Z82243.1-201ENST00000609432 473 ntBASIC3.94□□□□□ -1.78
CHMP4CQ96CF2 uc_338.1-201ENST00000612113 180 ntBASIC3.94□□□□□ -1.78
CHMP4CQ96CF2 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.94□□□□□ -1.78
CHMP4CQ96CF2 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.94□□□□□ -1.78
CHMP4CQ96CF2 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.94□□□□□ -1.78
CHMP4CQ96CF2 PLCE1P1-201ENST00000622094 305 ntBASIC3.94□□□□□ -1.78
CHMP4CQ96CF2 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.94□□□□□ -1.78
CHMP4CQ96CF2 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
CHMP4CQ96CF2 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CHMP4CQ96CF2 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
CHMP4CQ96CF2 AL365361.1-201ENST00000566942 3481 ntBASIC3.93□□□□□ -1.78
CHMP4CQ96CF2 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CHMP4CQ96CF2 RNU6-884P-201ENST00000363889 107 ntBASIC3.93□□□□□ -1.78
CHMP4CQ96CF2 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.93□□□□□ -1.78
CHMP4CQ96CF2 RNU6-1077P-201ENST00000410506 102 ntBASIC3.93□□□□□ -1.78
CHMP4CQ96CF2 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.93□□□□□ -1.78
CHMP4CQ96CF2 AC009161.1-201ENST00000417306 376 ntBASIC3.93□□□□□ -1.78
CHMP4CQ96CF2 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.93□□□□□ -1.78
CHMP4CQ96CF2 AL669831.1-202ENST00000428504 417 ntBASIC3.93□□□□□ -1.78
CHMP4CQ96CF2 GTF2IP13-201ENST00000438487 386 ntBASIC3.93□□□□□ -1.78
CHMP4CQ96CF2 Z75741.1-201ENST00000446793 314 ntBASIC3.93□□□□□ -1.78
CHMP4CQ96CF2 RPL37P4-201ENST00000448908 268 ntBASIC3.93□□□□□ -1.78
CHMP4CQ96CF2 snoU13.28-201ENST00000459235 104 ntBASIC3.93□□□□□ -1.78
CHMP4CQ96CF2 RN7SL601P-201ENST00000471221 293 ntBASIC3.93□□□□□ -1.78
CHMP4CQ96CF2 HMGB1P30-201ENST00000492455 606 ntBASIC3.93□□□□□ -1.78
CHMP4CQ96CF2 RN7SL504P-201ENST00000494496 287 ntBASIC3.93□□□□□ -1.78
CHMP4CQ96CF2 AC009901.1-201ENST00000506703 541 ntBASIC3.93□□□□□ -1.78
CHMP4CQ96CF2 CCDC34P1-201ENST00000507441 517 ntBASIC3.93□□□□□ -1.78
CHMP4CQ96CF2 AC008716.1-201ENST00000511084 513 ntBASIC3.93□□□□□ -1.78
CHMP4CQ96CF2 AC112206.3-201ENST00000514578 389 ntBASIC3.93□□□□□ -1.78
CHMP4CQ96CF2 RNU6-1038P-201ENST00000516516 104 ntBASIC3.93□□□□□ -1.78
CHMP4CQ96CF2 AC025755.1-201ENST00000521306 278 ntBASIC3.93□□□□□ -1.78
CHMP4CQ96CF2 CENPUP1-201ENST00000526649 1202 ntBASIC3.93□□□□□ -1.78
CHMP4CQ96CF2 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.93□□□□□ -1.78
CHMP4CQ96CF2 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.93□□□□□ -1.78
CHMP4CQ96CF2 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.93□□□□□ -1.78
CHMP4CQ96CF2 U6.99-201ENST00000637524 83 ntBASIC3.93□□□□□ -1.78
CHMP4CQ96CF2 AC100810.6-201ENST00000638068 285 ntBASIC3.93□□□□□ -1.78
CHMP4CQ96CF2 AC099654.14-201ENST00000638599 341 ntBASIC3.93□□□□□ -1.78
CHMP4CQ96CF2 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CHMP4CQ96CF2 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CHMP4CQ96CF2 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
CHMP4CQ96CF2 RNU6-270P-201ENST00000364131 105 ntBASIC3.92□□□□□ -1.78
CHMP4CQ96CF2 RNU6-371P-201ENST00000364283 108 ntBASIC3.92□□□□□ -1.78
CHMP4CQ96CF2 MIR128-1-201ENST00000384921 82 ntBASIC3.92□□□□□ -1.78
CHMP4CQ96CF2 SNORA48.2-201ENST00000390926 124 ntBASIC3.92□□□□□ -1.78
CHMP4CQ96CF2 SNORA16.2-201ENST00000390991 127 ntBASIC3.92□□□□□ -1.78
CHMP4CQ96CF2 RNU6-332P-201ENST00000391193 108 ntBASIC3.92□□□□□ -1.78
CHMP4CQ96CF2 FGF7P8-201ENST00000402994 292 ntBASIC3.92□□□□□ -1.78
CHMP4CQ96CF2 RPS4XP7-201ENST00000406274 780 ntBASIC3.92□□□□□ -1.78
CHMP4CQ96CF2 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.92□□□□□ -1.78
CHMP4CQ96CF2 RPL30P16-201ENST00000419341 429 ntBASIC3.92□□□□□ -1.78
CHMP4CQ96CF2 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.92□□□□□ -1.78
CHMP4CQ96CF2 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.92□□□□□ -1.78
CHMP4CQ96CF2 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.92□□□□□ -1.78
CHMP4CQ96CF2 AC007560.1-201ENST00000426912 237 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms