Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 AL589743.1-201ENST00000551932 2712 ntBASIC1.55□□□□□ -2.16
TOPBP1Q92547 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.54□□□□□ -2.16
TOPBP1Q92547 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
TOPBP1Q92547 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.54□□□□□ -2.16
TOPBP1Q92547 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
TOPBP1Q92547 RNU6-353P-201ENST00000364266 108 ntBASIC1.54□□□□□ -2.16
TOPBP1Q92547 RNU6-657P-201ENST00000383904 107 ntBASIC1.54□□□□□ -2.16
TOPBP1Q92547 AP002784.2-201ENST00000397300 549 ntBASIC1.54□□□□□ -2.16
TOPBP1Q92547 AC023141.4-201ENST00000412031 328 ntBASIC1.54□□□□□ -2.16
TOPBP1Q92547 OR6C66P-201ENST00000414917 930 ntBASIC1.54□□□□□ -2.16
TOPBP1Q92547 RPL21P90-201ENST00000415692 466 ntBASIC1.54□□□□□ -2.16
TOPBP1Q92547 RAC1P8-201ENST00000427086 527 ntBASIC1.54□□□□□ -2.16
TOPBP1Q92547 FTH1P12-201ENST00000432137 551 ntBASIC1.54□□□□□ -2.16
TOPBP1Q92547 MTND2P5-201ENST00000432656 1006 ntBASIC1.54□□□□□ -2.16
TOPBP1Q92547 MTATP6P7-201ENST00000453315 681 ntBASIC1.54□□□□□ -2.16
TOPBP1Q92547 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.54□□□□□ -2.16
TOPBP1Q92547 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC1.54□□□□□ -2.16
TOPBP1Q92547 AC010460.2-201ENST00000509054 677 ntBASIC1.54□□□□□ -2.16
TOPBP1Q92547 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.54□□□□□ -2.16
TOPBP1Q92547 AC079148.1-201ENST00000565944 819 ntBASIC1.54□□□□□ -2.16
TOPBP1Q92547 AC078899.2-201ENST00000595282 212 ntBASIC1.54□□□□□ -2.16
TOPBP1Q92547 RNU1-78P-201ENST00000391248 165 ntBASIC1.53□□□□□ -2.16
TOPBP1Q92547 RN7SKP200-201ENST00000410564 320 ntBASIC1.53□□□□□ -2.16
TOPBP1Q92547 RNU4-27P-201ENST00000410889 139 ntBASIC1.53□□□□□ -2.16
TOPBP1Q92547 RNU6-575P-201ENST00000411326 105 ntBASIC1.53□□□□□ -2.16
TOPBP1Q92547 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.53□□□□□ -2.16
TOPBP1Q92547 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.53□□□□□ -2.16
TOPBP1Q92547 CCDC58P2-201ENST00000417131 366 ntBASIC1.53□□□□□ -2.16
TOPBP1Q92547 AL109913.1-201ENST00000421173 514 ntBASIC1.53□□□□□ -2.16
TOPBP1Q92547 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.53□□□□□ -2.16
TOPBP1Q92547 BOLA3P3-201ENST00000505182 232 ntBASIC1.53□□□□□ -2.16
TOPBP1Q92547 AC023141.11-201ENST00000508864 202 ntBASIC1.53□□□□□ -2.16
TOPBP1Q92547 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.53□□□□□ -2.16
TOPBP1Q92547 AP004247.1-201ENST00000531556 1289 ntBASIC1.53□□□□□ -2.16
TOPBP1Q92547 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC1.53□□□□□ -2.16
TOPBP1Q92547 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.53□□□□□ -2.16
TOPBP1Q92547 SNORD14A-201ENST00000606526 91 ntBASIC1.53□□□□□ -2.16
TOPBP1Q92547 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC1.53□□□□□ -2.16
TOPBP1Q92547 AL627230.6-201ENST00000611129 280 ntBASIC1.53□□□□□ -2.16
TOPBP1Q92547 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.53□□□□□ -2.16
TOPBP1Q92547 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.53□□□□□ -2.16
TOPBP1Q92547 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
TOPBP1Q92547 RNU6-140P-201ENST00000384566 108 ntBASIC1.52□□□□□ -2.17
TOPBP1Q92547 RNU6-750P-201ENST00000390946 107 ntBASIC1.52□□□□□ -2.17
TOPBP1Q92547 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.52□□□□□ -2.17
TOPBP1Q92547 AC019178.2-201ENST00000423595 505 ntBASIC1.52□□□□□ -2.17
TOPBP1Q92547 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC1.52□□□□□ -2.17
TOPBP1Q92547 HMGB1P9-201ENST00000429856 646 ntBASIC1.52□□□□□ -2.17
TOPBP1Q92547 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC1.52□□□□□ -2.17
TOPBP1Q92547 GXYLT1P1-201ENST00000446657 490 ntBASIC1.52□□□□□ -2.17
TOPBP1Q92547 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.52□□□□□ -2.17
TOPBP1Q92547 RPS20P20-201ENST00000460498 340 ntBASIC1.52□□□□□ -2.17
TOPBP1Q92547 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.52□□□□□ -2.17
TOPBP1Q92547 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.52□□□□□ -2.17
TOPBP1Q92547 AC091860.1-201ENST00000505723 432 ntBASIC1.52□□□□□ -2.17
TOPBP1Q92547 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.52□□□□□ -2.17
TOPBP1Q92547 SCARNA3-201ENST00000517097 143 ntBASIC1.52□□□□□ -2.17
TOPBP1Q92547 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.52□□□□□ -2.17
TOPBP1Q92547 AC091946.2-201ENST00000606105 291 ntBASIC1.52□□□□□ -2.17
TOPBP1Q92547 AL050343.2-201ENST00000607338 280 ntBASIC1.52□□□□□ -2.17
TOPBP1Q92547 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.52□□□□□ -2.17
TOPBP1Q92547 RNU6-839P-201ENST00000363347 108 ntBASIC1.51□□□□□ -2.17
TOPBP1Q92547 RNU6-716P-201ENST00000365621 103 ntBASIC1.51□□□□□ -2.17
TOPBP1Q92547 MIR217-201ENST00000384817 110 ntBASIC1.51□□□□□ -2.17
TOPBP1Q92547 RNU6-932P-201ENST00000391108 106 ntBASIC1.51□□□□□ -2.17
TOPBP1Q92547 USP9YP19-201ENST00000412165 485 ntBASIC1.51□□□□□ -2.17
TOPBP1Q92547 SNORD56-201ENST00000413522 71 ntBASIC1.51□□□□□ -2.17
TOPBP1Q92547 AL158050.1-201ENST00000416077 457 ntBASIC1.51□□□□□ -2.17
TOPBP1Q92547 TAF13P2-201ENST00000416876 286 ntBASIC1.51□□□□□ -2.17
TOPBP1Q92547 USP9YP13-201ENST00000417797 480 ntBASIC1.51□□□□□ -2.17
TOPBP1Q92547 AC092634.6-201ENST00000418558 192 ntBASIC1.51□□□□□ -2.17
TOPBP1Q92547 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC1.51□□□□□ -2.17
TOPBP1Q92547 MICF-203ENST00000432679 129 ntBASIC1.51□□□□□ -2.17
TOPBP1Q92547 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC1.51□□□□□ -2.17
TOPBP1Q92547 AC010468.3-201ENST00000508225 458 ntBASIC1.51□□□□□ -2.17
TOPBP1Q92547 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.51□□□□□ -2.17
TOPBP1Q92547 AC022784.5-201ENST00000522241 437 ntBASIC1.51□□□□□ -2.17
TOPBP1Q92547 AC010186.2-204ENST00000537668 439 ntBASIC1.51□□□□□ -2.17
TOPBP1Q92547 AC006518.2-201ENST00000542513 940 ntBASIC1.51□□□□□ -2.17
TOPBP1Q92547 AC004908.2-201ENST00000609090 574 ntBASIC1.51□□□□□ -2.17
TOPBP1Q92547 MIR6513-201ENST00000621188 64 ntBASIC1.51□□□□□ -2.17
TOPBP1Q92547 AC008443.7-201ENST00000622195 246 ntBASIC1.51□□□□□ -2.17
TOPBP1Q92547 MIR924-201ENST00000638017 53 ntBASIC1.51□□□□□ -2.17
TOPBP1Q92547 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
TOPBP1Q92547 PTGES3P2-201ENST00000407942 482 ntBASIC1.5□□□□□ -2.17
TOPBP1Q92547 PPP1R11P2-201ENST00000423543 382 ntBASIC1.5□□□□□ -2.17
TOPBP1Q92547 EIF4EP4-201ENST00000424916 578 ntBASIC1.5□□□□□ -2.17
TOPBP1Q92547 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.5□□□□□ -2.17
TOPBP1Q92547 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.5□□□□□ -2.17
TOPBP1Q92547 RPL30P4-201ENST00000429309 333 ntBASIC1.5□□□□□ -2.17
TOPBP1Q92547 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.5□□□□□ -2.17
TOPBP1Q92547 Z82210.1-201ENST00000440037 231 ntBASIC1.5□□□□□ -2.17
TOPBP1Q92547 RNU6-1102P-201ENST00000516149 96 ntBASIC1.5□□□□□ -2.17
TOPBP1Q92547 SNORA76.2-201ENST00000517095 137 ntBASIC1.5□□□□□ -2.17
TOPBP1Q92547 HSPA8P13-201ENST00000523715 472 ntBASIC1.5□□□□□ -2.17
TOPBP1Q92547 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.5□□□□□ -2.17
TOPBP1Q92547 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC1.5□□□□□ -2.17
TOPBP1Q92547 AL132857.1-201ENST00000555180 708 ntBASIC1.5□□□□□ -2.17
TOPBP1Q92547 AC007151.1-201ENST00000572774 483 ntBASIC1.5□□□□□ -2.17
TOPBP1Q92547 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms