Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RAPGEF4Q8WZA2 NDUFB4P7-201ENST00000423198 363 ntBASIC3.8□□□□□ -1.8
RAPGEF4Q8WZA2 RPL7P46-201ENST00000425129 740 ntBASIC3.8□□□□□ -1.8
RAPGEF4Q8WZA2 RPL21P66-201ENST00000426566 466 ntBASIC3.8□□□□□ -1.8
RAPGEF4Q8WZA2 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.8□□□□□ -1.8
RAPGEF4Q8WZA2 RPL32P28-201ENST00000443577 397 ntBASIC3.8□□□□□ -1.8
RAPGEF4Q8WZA2 MTND3P16-201ENST00000452205 344 ntBASIC3.8□□□□□ -1.8
RAPGEF4Q8WZA2 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.8□□□□□ -1.8
RAPGEF4Q8WZA2 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.8□□□□□ -1.8
RAPGEF4Q8WZA2 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.8□□□□□ -1.8
RAPGEF4Q8WZA2 SNORD109B-201ENST00000458961 67 ntBASIC3.8□□□□□ -1.8
RAPGEF4Q8WZA2 RNU6-333P-201ENST00000459117 107 ntBASIC3.8□□□□□ -1.8
RAPGEF4Q8WZA2 SNORD109A-201ENST00000459128 67 ntBASIC3.8□□□□□ -1.8
RAPGEF4Q8WZA2 RNU7-170P-201ENST00000459303 61 ntBASIC3.8□□□□□ -1.8
RAPGEF4Q8WZA2 AC098799.2-201ENST00000509466 868 ntBASIC3.8□□□□□ -1.8
RAPGEF4Q8WZA2 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.8□□□□□ -1.8
RAPGEF4Q8WZA2 AC025465.4-201ENST00000513422 638 ntBASIC3.8□□□□□ -1.8
RAPGEF4Q8WZA2 SCARNA15.2-201ENST00000516409 127 ntBASIC3.8□□□□□ -1.8
RAPGEF4Q8WZA2 AC104027.1-201ENST00000521887 300 ntBASIC3.8□□□□□ -1.8
RAPGEF4Q8WZA2 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.8□□□□□ -1.8
RAPGEF4Q8WZA2 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.8□□□□□ -1.8
RAPGEF4Q8WZA2 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.8□□□□□ -1.8
RAPGEF4Q8WZA2 DPPA3P3-201ENST00000603842 430 ntBASIC3.8□□□□□ -1.8
RAPGEF4Q8WZA2 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.8□□□□□ -1.8
RAPGEF4Q8WZA2 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
RAPGEF4Q8WZA2 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.8□□□□□ -1.8
RAPGEF4Q8WZA2 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RAPGEF4Q8WZA2 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
RAPGEF4Q8WZA2 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RAPGEF4Q8WZA2 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
RAPGEF4Q8WZA2 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
RAPGEF4Q8WZA2 CBX3P1-201ENST00000325243 554 ntBASIC3.79□□□□□ -1.8
RAPGEF4Q8WZA2 Y_RNA.231-201ENST00000364358 102 ntBASIC3.79□□□□□ -1.8
RAPGEF4Q8WZA2 RNU4-20P-201ENST00000365601 151 ntBASIC3.79□□□□□ -1.8
RAPGEF4Q8WZA2 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
RAPGEF4Q8WZA2 AL360182.1-201ENST00000397433 468 ntBASIC3.79□□□□□ -1.8
RAPGEF4Q8WZA2 MIR1290-201ENST00000408735 78 ntBASIC3.79□□□□□ -1.8
RAPGEF4Q8WZA2 RNU2-52P-201ENST00000410680 190 ntBASIC3.79□□□□□ -1.8
RAPGEF4Q8WZA2 OR6C66P-201ENST00000414917 930 ntBASIC3.79□□□□□ -1.8
RAPGEF4Q8WZA2 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.79□□□□□ -1.8
RAPGEF4Q8WZA2 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.79□□□□□ -1.8
RAPGEF4Q8WZA2 RPL7L1P10-201ENST00000427790 463 ntBASIC3.79□□□□□ -1.8
RAPGEF4Q8WZA2 AC098614.3-201ENST00000438957 440 ntBASIC3.79□□□□□ -1.8
RAPGEF4Q8WZA2 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.79□□□□□ -1.8
RAPGEF4Q8WZA2 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.79□□□□□ -1.8
RAPGEF4Q8WZA2 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.79□□□□□ -1.8
RAPGEF4Q8WZA2 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.79□□□□□ -1.8
RAPGEF4Q8WZA2 SNRPFP3-201ENST00000457792 225 ntBASIC3.79□□□□□ -1.8
RAPGEF4Q8WZA2 AC087588.1-201ENST00000462203 316 ntBASIC3.79□□□□□ -1.8
RAPGEF4Q8WZA2 HMGN2P26-201ENST00000463169 339 ntBASIC3.79□□□□□ -1.8
RAPGEF4Q8WZA2 AP000852.1-201ENST00000472460 573 ntBASIC3.79□□□□□ -1.8
RAPGEF4Q8WZA2 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RAPGEF4Q8WZA2 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.79□□□□□ -1.8
RAPGEF4Q8WZA2 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RAPGEF4Q8WZA2 AL359273.1-201ENST00000510918 627 ntBASIC3.79□□□□□ -1.8
RAPGEF4Q8WZA2 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.79□□□□□ -1.8
RAPGEF4Q8WZA2 RNU6-677P-201ENST00000516914 101 ntBASIC3.79□□□□□ -1.8
RAPGEF4Q8WZA2 RANP3-201ENST00000530970 276 ntBASIC3.79□□□□□ -1.8
RAPGEF4Q8WZA2 MIR3945-201ENST00000581853 98 ntBASIC3.79□□□□□ -1.8
RAPGEF4Q8WZA2 UBE2V2P2-201ENST00000587677 504 ntBASIC3.79□□□□□ -1.8
RAPGEF4Q8WZA2 PLCE1P1-201ENST00000622094 305 ntBASIC3.79□□□□□ -1.8
RAPGEF4Q8WZA2 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.79□□□□□ -1.8
RAPGEF4Q8WZA2 TPTE2P4-201ENST00000258589 1605 ntBASIC3.79□□□□□ -1.8
RAPGEF4Q8WZA2 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RAPGEF4Q8WZA2 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
RAPGEF4Q8WZA2 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RAPGEF4Q8WZA2 RNU6-1287P-201ENST00000362914 107 ntBASIC3.78□□□□□ -1.8
RAPGEF4Q8WZA2 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
RAPGEF4Q8WZA2 RNU6-1060P-201ENST00000384664 107 ntBASIC3.78□□□□□ -1.8
RAPGEF4Q8WZA2 MIR196B-201ENST00000384852 84 ntBASIC3.78□□□□□ -1.8
RAPGEF4Q8WZA2 RNU6-550P-201ENST00000391057 101 ntBASIC3.78□□□□□ -1.8
RAPGEF4Q8WZA2 AL139397.2-201ENST00000404529 772 ntBASIC3.78□□□□□ -1.8
RAPGEF4Q8WZA2 RPL27AP8-201ENST00000424277 446 ntBASIC3.78□□□□□ -1.8
RAPGEF4Q8WZA2 AL513185.2-201ENST00000425543 193 ntBASIC3.78□□□□□ -1.8
RAPGEF4Q8WZA2 VDAC1P3-201ENST00000434069 851 ntBASIC3.78□□□□□ -1.8
RAPGEF4Q8WZA2 CBWD4P-201ENST00000445695 655 ntBASIC3.78□□□□□ -1.8
RAPGEF4Q8WZA2 PMCHL2-203ENST00000457791 237 ntBASIC3.78□□□□□ -1.8
RAPGEF4Q8WZA2 RNU6-953P-201ENST00000459154 107 ntBASIC3.78□□□□□ -1.8
RAPGEF4Q8WZA2 HMGN1P12-201ENST00000499125 195 ntBASIC3.78□□□□□ -1.8
RAPGEF4Q8WZA2 RBBP4P6-201ENST00000508098 202 ntBASIC3.78□□□□□ -1.8
RAPGEF4Q8WZA2 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.78□□□□□ -1.8
RAPGEF4Q8WZA2 AC114781.4-201ENST00000513707 639 ntBASIC3.78□□□□□ -1.8
RAPGEF4Q8WZA2 AL137161.1-201ENST00000532231 390 ntBASIC3.78□□□□□ -1.8
RAPGEF4Q8WZA2 BNIP3P6-201ENST00000549284 499 ntBASIC3.78□□□□□ -1.8
RAPGEF4Q8WZA2 AC078814.3-201ENST00000553036 491 ntBASIC3.78□□□□□ -1.8
RAPGEF4Q8WZA2 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.78□□□□□ -1.8
RAPGEF4Q8WZA2 MIR3690-201ENST00000580266 75 ntBASIC3.78□□□□□ -1.8
RAPGEF4Q8WZA2 RNU6-89P-201ENST00000606519 100 ntBASIC3.78□□□□□ -1.8
RAPGEF4Q8WZA2 AC034102.8-201ENST00000615146 484 ntBASIC3.78□□□□□ -1.8
RAPGEF4Q8WZA2 AL359547.2-201ENST00000615810 418 ntBASIC3.78□□□□□ -1.8
RAPGEF4Q8WZA2 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RAPGEF4Q8WZA2 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.77□□□□□ -1.81
RAPGEF4Q8WZA2 OR4G2P-202ENST00000641004 1759 ntBASIC3.77□□□□□ -1.81
RAPGEF4Q8WZA2 RNU6-190P-201ENST00000384154 102 ntBASIC3.77□□□□□ -1.81
RAPGEF4Q8WZA2 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
RAPGEF4Q8WZA2 RNU6-332P-201ENST00000391193 108 ntBASIC3.77□□□□□ -1.81
RAPGEF4Q8WZA2 AL606923.1-201ENST00000406616 190 ntBASIC3.77□□□□□ -1.81
RAPGEF4Q8WZA2 RNU2-37P-201ENST00000410695 177 ntBASIC3.77□□□□□ -1.81
RAPGEF4Q8WZA2 RNU2-41P-201ENST00000410991 178 ntBASIC3.77□□□□□ -1.81
RAPGEF4Q8WZA2 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms