Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 SNORD11.1-201ENST00000459482 85 ntBASIC2.18□□□□□ -2.06
RNF139Q8WU17 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.18□□□□□ -2.06
RNF139Q8WU17 AC092436.1-201ENST00000506450 503 ntBASIC2.18□□□□□ -2.06
RNF139Q8WU17 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC2.18□□□□□ -2.06
RNF139Q8WU17 RNU6-1183P-201ENST00000517054 60 ntBASIC2.18□□□□□ -2.06
RNF139Q8WU17 HSPE1P18-201ENST00000517602 280 ntBASIC2.18□□□□□ -2.06
RNF139Q8WU17 AC105185.1-201ENST00000518705 535 ntBASIC2.18□□□□□ -2.06
RNF139Q8WU17 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.18□□□□□ -2.06
RNF139Q8WU17 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.18□□□□□ -2.06
RNF139Q8WU17 AC079598.5-201ENST00000547460 117 ntBASIC2.18□□□□□ -2.06
RNF139Q8WU17 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.18□□□□□ -2.06
RNF139Q8WU17 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.18□□□□□ -2.06
RNF139Q8WU17 RPS3AP4-201ENST00000555161 764 ntBASIC2.18□□□□□ -2.06
RNF139Q8WU17 AC012435.1-202ENST00000568772 240 ntBASIC2.18□□□□□ -2.06
RNF139Q8WU17 MIR4782-201ENST00000577987 79 ntBASIC2.18□□□□□ -2.06
RNF139Q8WU17 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.18□□□□□ -2.06
RNF139Q8WU17 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.18□□□□□ -2.06
RNF139Q8WU17 VN1R82P-201ENST00000601481 356 ntBASIC2.18□□□□□ -2.06
RNF139Q8WU17 AL139418.1-201ENST00000613613 177 ntBASIC2.18□□□□□ -2.06
RNF139Q8WU17 AC009233.1-201ENST00000616477 371 ntBASIC2.18□□□□□ -2.06
RNF139Q8WU17 AC091953.2-201ENST00000623979 160 ntBASIC2.18□□□□□ -2.06
RNF139Q8WU17 AC091932.3-201ENST00000624223 323 ntBASIC2.18□□□□□ -2.06
RNF139Q8WU17 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
RNF139Q8WU17 KPNA2P1-201ENST00000458289 1591 ntBASIC2.18□□□□□ -2.06
RNF139Q8WU17 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
RNF139Q8WU17 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
RNF139Q8WU17 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.18□□□□□ -2.06
RNF139Q8WU17 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.18□□□□□ -2.06
RNF139Q8WU17 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
RNF139Q8WU17 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.17□□□□□ -2.06
RNF139Q8WU17 AC138393.1-203ENST00000327086 343 ntBASIC2.17□□□□□ -2.06
RNF139Q8WU17 SNORD113-6-201ENST00000363345 75 ntBASIC2.17□□□□□ -2.06
RNF139Q8WU17 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
RNF139Q8WU17 SNORA40.19-201ENST00000390846 128 ntBASIC2.17□□□□□ -2.06
RNF139Q8WU17 RNU6-817P-201ENST00000391083 104 ntBASIC2.17□□□□□ -2.06
RNF139Q8WU17 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC2.17□□□□□ -2.06
RNF139Q8WU17 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.17□□□□□ -2.06
RNF139Q8WU17 MTCO2P21-201ENST00000419780 677 ntBASIC2.17□□□□□ -2.06
RNF139Q8WU17 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
RNF139Q8WU17 AL353706.1-201ENST00000436728 494 ntBASIC2.17□□□□□ -2.06
RNF139Q8WU17 RPS15AP9-201ENST00000439856 381 ntBASIC2.17□□□□□ -2.06
RNF139Q8WU17 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.17□□□□□ -2.06
RNF139Q8WU17 AC092001.1-201ENST00000453012 261 ntBASIC2.17□□□□□ -2.06
RNF139Q8WU17 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.17□□□□□ -2.06
RNF139Q8WU17 SMURF2P1-201ENST00000514992 481 ntBASIC2.17□□□□□ -2.06
RNF139Q8WU17 RNU6-64P-201ENST00000517119 105 ntBASIC2.17□□□□□ -2.06
RNF139Q8WU17 RANP3-201ENST00000530970 276 ntBASIC2.17□□□□□ -2.06
RNF139Q8WU17 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.17□□□□□ -2.06
RNF139Q8WU17 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.17□□□□□ -2.06
RNF139Q8WU17 AC012213.3-201ENST00000577199 777 ntBASIC2.17□□□□□ -2.06
RNF139Q8WU17 AL627230.6-201ENST00000611129 280 ntBASIC2.17□□□□□ -2.06
RNF139Q8WU17 AC090970.3-201ENST00000612566 866 ntBASIC2.17□□□□□ -2.06
RNF139Q8WU17 AC138627.2-201ENST00000624202 601 ntBASIC2.17□□□□□ -2.06
RNF139Q8WU17 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
RNF139Q8WU17 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
RNF139Q8WU17 OR56A5-201ENST00000340110 738 ntBASIC2.16□□□□□ -2.06
RNF139Q8WU17 SNORA4.1-201ENST00000364263 144 ntBASIC2.16□□□□□ -2.06
RNF139Q8WU17 RNU6-1280P-201ENST00000365211 107 ntBASIC2.16□□□□□ -2.06
RNF139Q8WU17 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
RNF139Q8WU17 AL512604.1-201ENST00000404812 257 ntBASIC2.16□□□□□ -2.06
RNF139Q8WU17 AL008987.1-201ENST00000415528 237 ntBASIC2.16□□□□□ -2.06
RNF139Q8WU17 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.16□□□□□ -2.06
RNF139Q8WU17 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.16□□□□□ -2.06
RNF139Q8WU17 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.16□□□□□ -2.06
RNF139Q8WU17 AL117351.1-201ENST00000438864 766 ntBASIC2.16□□□□□ -2.06
RNF139Q8WU17 AL161788.1-201ENST00000441805 169 ntBASIC2.16□□□□□ -2.06
RNF139Q8WU17 Z73417.1-201ENST00000447373 778 ntBASIC2.16□□□□□ -2.06
RNF139Q8WU17 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC2.16□□□□□ -2.06
RNF139Q8WU17 HSPE1P23-201ENST00000509838 286 ntBASIC2.16□□□□□ -2.06
RNF139Q8WU17 AC093281.2-201ENST00000510153 597 ntBASIC2.16□□□□□ -2.06
RNF139Q8WU17 RNU5A-4P-201ENST00000516588 111 ntBASIC2.16□□□□□ -2.06
RNF139Q8WU17 MRPS36P3-201ENST00000519284 130 ntBASIC2.16□□□□□ -2.06
RNF139Q8WU17 IGKV3-31-201ENST00000523109 329 ntBASIC2.16□□□□□ -2.06
RNF139Q8WU17 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.16□□□□□ -2.06
RNF139Q8WU17 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC2.16□□□□□ -2.06
RNF139Q8WU17 DEFB108A-201ENST00000530110 222 ntBASIC2.16□□□□□ -2.06
RNF139Q8WU17 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.16□□□□□ -2.06
RNF139Q8WU17 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.16□□□□□ -2.06
RNF139Q8WU17 MIR4298-201ENST00000584380 73 ntBASIC2.16□□□□□ -2.06
RNF139Q8WU17 AL109918.3-201ENST00000603072 338 ntBASIC2.16□□□□□ -2.06
RNF139Q8WU17 AC005034.5-201ENST00000604219 466 ntBASIC2.16□□□□□ -2.06
RNF139Q8WU17 AL121917.1-203ENST00000605534 577 ntBASIC2.16□□□□□ -2.06
RNF139Q8WU17 AP000240.1-201ENST00000609910 452 ntBASIC2.16□□□□□ -2.06
RNF139Q8WU17 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.16□□□□□ -2.06
RNF139Q8WU17 CKAP2P1-201ENST00000555477 2049 ntBASIC2.15□□□□□ -2.06
RNF139Q8WU17 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
RNF139Q8WU17 RNU6-433P-201ENST00000363216 104 ntBASIC2.15□□□□□ -2.07
RNF139Q8WU17 RNU5A-8P-201ENST00000364102 114 ntBASIC2.15□□□□□ -2.07
RNF139Q8WU17 RNU4-28P-201ENST00000364739 141 ntBASIC2.15□□□□□ -2.07
RNF139Q8WU17 MIR95-201ENST00000385072 81 ntBASIC2.15□□□□□ -2.07
RNF139Q8WU17 MIR561-201ENST00000385216 97 ntBASIC2.15□□□□□ -2.07
RNF139Q8WU17 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
RNF139Q8WU17 MIR1261-201ENST00000408659 82 ntBASIC2.15□□□□□ -2.07
RNF139Q8WU17 RNU4-26P-201ENST00000410270 107 ntBASIC2.15□□□□□ -2.07
RNF139Q8WU17 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC2.15□□□□□ -2.07
RNF139Q8WU17 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.15□□□□□ -2.07
RNF139Q8WU17 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.15□□□□□ -2.07
RNF139Q8WU17 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
RNF139Q8WU17 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.15□□□□□ -2.07
RNF139Q8WU17 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms