Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC019178.2-201ENST00000423595 505 ntBASIC1.78□□□□□ -2.13
SHROOM3Q8TF72 MTATP6P17-201ENST00000431030 672 ntBASIC1.78□□□□□ -2.13
SHROOM3Q8TF72 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC1.78□□□□□ -2.13
SHROOM3Q8TF72 EPS15P1-201ENST00000448836 336 ntBASIC1.78□□□□□ -2.13
SHROOM3Q8TF72 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.78□□□□□ -2.13
SHROOM3Q8TF72 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.78□□□□□ -2.13
SHROOM3Q8TF72 AC021382.1-201ENST00000483523 359 ntBASIC1.78□□□□□ -2.13
SHROOM3Q8TF72 AC104564.1-201ENST00000493028 407 ntBASIC1.78□□□□□ -2.13
SHROOM3Q8TF72 AC022447.3-201ENST00000506865 495 ntBASIC1.78□□□□□ -2.13
SHROOM3Q8TF72 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.78□□□□□ -2.13
SHROOM3Q8TF72 AC107934.1-201ENST00000522215 217 ntBASIC1.78□□□□□ -2.13
SHROOM3Q8TF72 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.78□□□□□ -2.13
SHROOM3Q8TF72 AC087441.2-201ENST00000529141 262 ntBASIC1.78□□□□□ -2.13
SHROOM3Q8TF72 AC022878.1-201ENST00000530684 149 ntBASIC1.78□□□□□ -2.13
SHROOM3Q8TF72 MRPS36P5-201ENST00000551909 298 ntBASIC1.78□□□□□ -2.13
SHROOM3Q8TF72 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.78□□□□□ -2.13
SHROOM3Q8TF72 AC091489.2-201ENST00000566263 604 ntBASIC1.78□□□□□ -2.13
SHROOM3Q8TF72 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.78□□□□□ -2.13
SHROOM3Q8TF72 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC1.78□□□□□ -2.13
SHROOM3Q8TF72 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC1.78□□□□□ -2.13
SHROOM3Q8TF72 AC004908.2-201ENST00000609090 574 ntBASIC1.78□□□□□ -2.13
SHROOM3Q8TF72 AP000254.1-201ENST00000609934 520 ntBASIC1.78□□□□□ -2.13
SHROOM3Q8TF72 AC008443.7-201ENST00000622195 246 ntBASIC1.78□□□□□ -2.13
SHROOM3Q8TF72 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
SHROOM3Q8TF72 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
SHROOM3Q8TF72 DEFB109C-201ENST00000382575 264 ntBASIC1.77□□□□□ -2.13
SHROOM3Q8TF72 DEFB109B-201ENST00000382656 264 ntBASIC1.77□□□□□ -2.13
SHROOM3Q8TF72 AC098592.1-201ENST00000419352 333 ntBASIC1.77□□□□□ -2.13
SHROOM3Q8TF72 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC1.77□□□□□ -2.13
SHROOM3Q8TF72 AL358075.3-201ENST00000426289 226 ntBASIC1.77□□□□□ -2.13
SHROOM3Q8TF72 SUMO1P4-201ENST00000429430 302 ntBASIC1.77□□□□□ -2.13
SHROOM3Q8TF72 AL590233.1-201ENST00000430017 456 ntBASIC1.77□□□□□ -2.13
SHROOM3Q8TF72 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC1.77□□□□□ -2.13
SHROOM3Q8TF72 IFNA20P-201ENST00000436840 528 ntBASIC1.77□□□□□ -2.13
SHROOM3Q8TF72 MTCYBP39-201ENST00000437562 491 ntBASIC1.77□□□□□ -2.13
SHROOM3Q8TF72 AL121871.1-201ENST00000443413 436 ntBASIC1.77□□□□□ -2.13
SHROOM3Q8TF72 ELOCP30-201ENST00000447108 299 ntBASIC1.77□□□□□ -2.13
SHROOM3Q8TF72 TPT1P14-201ENST00000448018 505 ntBASIC1.77□□□□□ -2.13
SHROOM3Q8TF72 DPPA3P1-201ENST00000448050 469 ntBASIC1.77□□□□□ -2.13
SHROOM3Q8TF72 snoU13.4-201ENST00000458916 104 ntBASIC1.77□□□□□ -2.13
SHROOM3Q8TF72 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.77□□□□□ -2.13
SHROOM3Q8TF72 SNORA70.16-201ENST00000516390 95 ntBASIC1.77□□□□□ -2.13
SHROOM3Q8TF72 RNU6-711P-201ENST00000517255 106 ntBASIC1.77□□□□□ -2.13
SHROOM3Q8TF72 COX6CP5-201ENST00000527162 228 ntBASIC1.77□□□□□ -2.13
SHROOM3Q8TF72 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC1.77□□□□□ -2.13
SHROOM3Q8TF72 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.77□□□□□ -2.13
SHROOM3Q8TF72 MIR3935-201ENST00000583472 104 ntBASIC1.77□□□□□ -2.13
SHROOM3Q8TF72 WISP1-OT1-201ENST00000602893 642 ntBASIC1.77□□□□□ -2.13
SHROOM3Q8TF72 AL590229.1-201ENST00000603497 542 ntBASIC1.77□□□□□ -2.13
SHROOM3Q8TF72 AL360219.1-201ENST00000610230 366 ntBASIC1.77□□□□□ -2.13
SHROOM3Q8TF72 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
SHROOM3Q8TF72 AC112204.3-201ENST00000623822 332 ntBASIC1.77□□□□□ -2.13
SHROOM3Q8TF72 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.77□□□□□ -2.13
SHROOM3Q8TF72 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SHROOM3Q8TF72 DDX10P1-201ENST00000448545 1933 ntBASIC1.77□□□□□ -2.13
SHROOM3Q8TF72 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 Y_RNA.36-201ENST00000362602 112 ntBASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 RNU6-288P-201ENST00000363690 104 ntBASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 RNU5F-7P-201ENST00000363696 115 ntBASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 RNU6-931P-201ENST00000363850 107 ntBASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 AL627390.1-201ENST00000396055 340 ntBASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 RPS4XP3-201ENST00000398541 413 ntBASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 RPS20P2-201ENST00000402520 389 ntBASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 AC004965.1-201ENST00000413033 213 ntBASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 MTND4P20-201ENST00000424125 869 ntBASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 AL356583.2-201ENST00000426536 280 ntBASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 RPL37P21-201ENST00000435890 276 ntBASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 AL451074.3-201ENST00000437709 472 ntBASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 RPL26P6-201ENST00000440913 438 ntBASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 SSXP4-201ENST00000451349 245 ntBASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 AP1S2P1-201ENST00000457344 379 ntBASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 AC104563.1-201ENST00000476147 376 ntBASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 RPL31P60-201ENST00000478450 367 ntBASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 BET1P1-201ENST00000482276 359 ntBASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 RNU6-232P-201ENST00000517144 64 ntBASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 AC011260.1-201ENST00000578420 472 ntBASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 MIR7844-201ENST00000616161 122 ntBASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 AL136164.4-201ENST00000625013 2135 ntBASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 AC025048.6-202ENST00000627667 438 ntBASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 RNU6-799P-201ENST00000363567 107 ntBASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 Y_RNA.205-201ENST00000364128 113 ntBASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 RN7SKP266-201ENST00000410232 287 ntBASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 MTND3P17-201ENST00000416968 344 ntBASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 RPL27AP8-201ENST00000424277 446 ntBASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 AL445669.1-201ENST00000426743 755 ntBASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 MTATP6P4-201ENST00000427725 675 ntBASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 MED14P1-201ENST00000430517 648 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms