Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 EIF4EP3-201ENST00000498782 656 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC0.36□□□□□ -2.35
SYNE1Q8NF91 SNORA44.1-201ENST00000517031 108 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC0.36□□□□□ -2.35
SYNE1Q8NF91 AC007151.1-201ENST00000572774 483 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC0.36□□□□□ -2.35
SYNE1Q8NF91 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
SYNE1Q8NF91 AC099842.1-201ENST00000619919 596 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 AC109454.4-201ENST00000623411 649 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 AP000560.1-201ENST00000624150 1937 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 SNORD115-48-201ENST00000364764 76 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 RNU6-748P-201ENST00000384648 107 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC0.36□□□□□ -2.35
SYNE1Q8NF91 SFR1P2-201ENST00000421841 730 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 AL160275.3-201ENST00000423876 471 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC0.36□□□□□ -2.35
SYNE1Q8NF91 AC004854.1-201ENST00000440356 349 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC0.36□□□□□ -2.35
SYNE1Q8NF91 AC007000.2-201ENST00000442564 487 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC0.36□□□□□ -2.35
SYNE1Q8NF91 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC0.36□□□□□ -2.35
SYNE1Q8NF91 SNORA31.6-201ENST00000516241 130 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 AP005597.4-201ENST00000526762 229 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 AL590095.2-201ENST00000604136 117 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 AL031176.1-201ENST00000604554 466 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 AC091946.2-201ENST00000606105 291 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 SNORD114-21-201ENST00000606412 72 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 UBE2Q2P6-201ENST00000612666 153 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 AC027309.3-201ENST00000623419 351 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
SYNE1Q8NF91 SNORA51.6-201ENST00000384151 125 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 Y_RNA.549-201ENST00000384657 102 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 MIR1197-201ENST00000408818 88 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 AL451054.2-201ENST00000420896 202 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 snoU13.8-201ENST00000458890 104 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 RNU1-98P-201ENST00000458992 160 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.36□□□□□ -2.35
SYNE1Q8NF91 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC0.36□□□□□ -2.35
SYNE1Q8NF91 AL359212.1-201ENST00000556608 614 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 AC091925.1-201ENST00000623204 462 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 AL590396.4-201ENST00000636779 956 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 AL356473.1-201ENST00000406203 1408 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
SYNE1Q8NF91 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC0.36□□□□□ -2.35
SYNE1Q8NF91 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.36□□□□□ -2.35
SYNE1Q8NF91 RNU6-939P-201ENST00000384634 107 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
SYNE1Q8NF91 AC068050.1-201ENST00000394891 380 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 MIR888-201ENST00000401186 77 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 CYCSP48-201ENST00000417124 323 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.36□□□□□ -2.35
SYNE1Q8NF91 GTF2IP20-201ENST00000431663 360 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 JTBP1-201ENST00000441314 247 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.36□□□□□ -2.35
SYNE1Q8NF91 NDUFA5P7-201ENST00000452914 242 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC0.36□□□□□ -2.35
SYNE1Q8NF91 CBX3P3-201ENST00000508108 532 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 RN7SKP265-201ENST00000516448 223 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 AP004247.1-201ENST00000531556 1289 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.36□□□□□ -2.35
SYNE1Q8NF91 AL391813.1-201ENST00000603098 260 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.36□□□□□ -2.35
SYNE1Q8NF91 AL138955.1-201ENST00000622881 1040 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 AC132825.7-201ENST00000638744 335 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 MTND5P9-201ENST00000503854 1755 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
SYNE1Q8NF91 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC0.36□□□□□ -2.35
SYNE1Q8NF91 AC092393.1-201ENST00000439625 742 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 AL360221.1-201ENST00000445989 335 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 MTCYBP11-201ENST00000447254 1109 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 LARP1BP2-201ENST00000486594 519 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 MTCYBP16-201ENST00000509187 1129 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 AC022861.1-201ENST00000522981 663 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 CBX3P7-201ENST00000532876 502 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC0.36□□□□□ -2.35
SYNE1Q8NF91 DUXAP11-201ENST00000603858 526 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 AL355297.2-201ENST00000604792 129 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC0.36□□□□□ -2.35
SYNE1Q8NF91 RNU6-883P-201ENST00000384597 107 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 ZNF90P2-204ENST00000419323 1075 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
SYNE1Q8NF91 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC0.36□□□□□ -2.35
SYNE1Q8NF91 NANOGP2-201ENST00000435391 727 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 MTND1P9-201ENST00000453775 944 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 AC010460.2-201ENST00000509054 677 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.36□□□□□ -2.35
SYNE1Q8NF91 AC005332.6-201ENST00000613178 446 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 AL603758.1-201ENST00000618654 241 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 AC138627.2-201ENST00000624202 601 ntBASIC0.36□□□□□ -2.35
SYNE1Q8NF91 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
SYNE1Q8NF91 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC0.36□□□□□ -2.35
SYNE1Q8NF91 MTCO1P23-201ENST00000415223 1526 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.35□□□□□ -2.35
SYNE1Q8NF91 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.35□□□□□ -2.35
SYNE1Q8NF91 NDUFB4P7-201ENST00000423198 363 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 AL358176.2-201ENST00000425769 204 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 RPL30P4-201ENST00000429309 333 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.35□□□□□ -2.35
SYNE1Q8NF91 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms