Protein–RNA interactions for Protein: Q8NEK5

ZNF548, Zinc finger protein 548, humanhuman

Predicted RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548Q8NEK5 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
ZNF548Q8NEK5 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
ZNF548Q8NEK5 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
ZNF548Q8NEK5 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.88
ZNF548Q8NEK5 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
ZNF548Q8NEK5 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.34□□□□□ -1.88
ZNF548Q8NEK5 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.33□□□□□ -1.88
ZNF548Q8NEK5 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ZNF548Q8NEK5 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
ZNF548Q8NEK5 RNU1-75P-201ENST00000347264 129 ntBASIC3.33□□□□□ -1.88
ZNF548Q8NEK5 Y_RNA.399-201ENST00000383955 105 ntBASIC3.33□□□□□ -1.88
ZNF548Q8NEK5 RNU6-701P-201ENST00000384059 107 ntBASIC3.33□□□□□ -1.88
ZNF548Q8NEK5 NDUFS5P1-201ENST00000405668 289 ntBASIC3.33□□□□□ -1.88
ZNF548Q8NEK5 RPL5P18-201ENST00000406671 891 ntBASIC3.33□□□□□ -1.88
ZNF548Q8NEK5 AC074085.1-201ENST00000413598 418 ntBASIC3.33□□□□□ -1.88
ZNF548Q8NEK5 RPL7P10-201ENST00000417407 739 ntBASIC3.33□□□□□ -1.88
ZNF548Q8NEK5 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.33□□□□□ -1.88
ZNF548Q8NEK5 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.33□□□□□ -1.88
ZNF548Q8NEK5 AC004866.2-201ENST00000438285 481 ntBASIC3.33□□□□□ -1.88
ZNF548Q8NEK5 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.33□□□□□ -1.88
ZNF548Q8NEK5 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.33□□□□□ -1.88
ZNF548Q8NEK5 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.33□□□□□ -1.88
ZNF548Q8NEK5 AC027575.1-201ENST00000481064 460 ntBASIC3.33□□□□□ -1.88
ZNF548Q8NEK5 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.33□□□□□ -1.88
ZNF548Q8NEK5 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.33□□□□□ -1.88
ZNF548Q8NEK5 RNU6-189P-201ENST00000516120 101 ntBASIC3.33□□□□□ -1.88
ZNF548Q8NEK5 RNA5SP454-201ENST00000517231 127 ntBASIC3.33□□□□□ -1.88
ZNF548Q8NEK5 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.33□□□□□ -1.88
ZNF548Q8NEK5 AC018630.1-201ENST00000541376 925 ntBASIC3.33□□□□□ -1.88
ZNF548Q8NEK5 AC090115.3-201ENST00000553218 849 ntBASIC3.33□□□□□ -1.88
ZNF548Q8NEK5 AF038458.1-201ENST00000588406 262 ntBASIC3.33□□□□□ -1.88
ZNF548Q8NEK5 AC067852.3-201ENST00000589177 561 ntBASIC3.33□□□□□ -1.88
ZNF548Q8NEK5 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.33□□□□□ -1.88
ZNF548Q8NEK5 AP001330.4-201ENST00000604350 154 ntBASIC3.33□□□□□ -1.88
ZNF548Q8NEK5 AL080274.1-201ENST00000605565 220 ntBASIC3.33□□□□□ -1.88
ZNF548Q8NEK5 AC116312.1-201ENST00000606841 314 ntBASIC3.33□□□□□ -1.88
ZNF548Q8NEK5 AL627309.6-201ENST00000606857 840 ntBASIC3.33□□□□□ -1.88
ZNF548Q8NEK5 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.33□□□□□ -1.88
ZNF548Q8NEK5 AC009570.1-201ENST00000609599 745 ntBASIC3.33□□□□□ -1.88
ZNF548Q8NEK5 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.33□□□□□ -1.88
ZNF548Q8NEK5 AL589994.2-201ENST00000621124 579 ntBASIC3.33□□□□□ -1.88
ZNF548Q8NEK5 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.33□□□□□ -1.88
ZNF548Q8NEK5 MTND4LP32-201ENST00000636111 270 ntBASIC3.33□□□□□ -1.88
ZNF548Q8NEK5 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.33□□□□□ -1.88
ZNF548Q8NEK5 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
ZNF548Q8NEK5 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
ZNF548Q8NEK5 AL353746.1-201ENST00000566293 6881 ntBASIC3.33□□□□□ -1.88
ZNF548Q8NEK5 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.33□□□□□ -1.88
ZNF548Q8NEK5 MIR369-201ENST00000362155 70 ntBASIC3.32□□□□□ -1.88
ZNF548Q8NEK5 RNA5SP197-201ENST00000363357 119 ntBASIC3.32□□□□□ -1.88
ZNF548Q8NEK5 Y_RNA.135-201ENST00000363439 95 ntBASIC3.32□□□□□ -1.88
ZNF548Q8NEK5 SNORA63C-201ENST00000364578 129 ntBASIC3.32□□□□□ -1.88
ZNF548Q8NEK5 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
ZNF548Q8NEK5 RNU6-14P-201ENST00000384630 106 ntBASIC3.32□□□□□ -1.88
ZNF548Q8NEK5 MIR559-201ENST00000385188 96 ntBASIC3.32□□□□□ -1.88
ZNF548Q8NEK5 MTCYBP4-201ENST00000401524 249 ntBASIC3.32□□□□□ -1.88
ZNF548Q8NEK5 RNU2-43P-201ENST00000410306 190 ntBASIC3.32□□□□□ -1.88
ZNF548Q8NEK5 SSXP9-201ENST00000417503 292 ntBASIC3.32□□□□□ -1.88
ZNF548Q8NEK5 Z82205.1-201ENST00000428456 297 ntBASIC3.32□□□□□ -1.88
ZNF548Q8NEK5 VDAC1P3-201ENST00000434069 851 ntBASIC3.32□□□□□ -1.88
ZNF548Q8NEK5 FABP5P14-201ENST00000437273 393 ntBASIC3.32□□□□□ -1.88
ZNF548Q8NEK5 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.32□□□□□ -1.88
ZNF548Q8NEK5 MTND1P17-201ENST00000448961 204 ntBASIC3.32□□□□□ -1.88
ZNF548Q8NEK5 AC107399.1-201ENST00000451226 265 ntBASIC3.32□□□□□ -1.88
ZNF548Q8NEK5 Y_RNA.631-201ENST00000459607 101 ntBASIC3.32□□□□□ -1.88
ZNF548Q8NEK5 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ZNF548Q8NEK5 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.32□□□□□ -1.88
ZNF548Q8NEK5 RN7SL504P-201ENST00000494496 287 ntBASIC3.32□□□□□ -1.88
ZNF548Q8NEK5 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.32□□□□□ -1.88
ZNF548Q8NEK5 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.32□□□□□ -1.88
ZNF548Q8NEK5 PHBP14-201ENST00000512887 367 ntBASIC3.32□□□□□ -1.88
ZNF548Q8NEK5 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.32□□□□□ -1.88
ZNF548Q8NEK5 RNU6-123P-201ENST00000516163 102 ntBASIC3.32□□□□□ -1.88
ZNF548Q8NEK5 SCARNA13-201ENST00000516672 275 ntBASIC3.32□□□□□ -1.88
ZNF548Q8NEK5 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.32□□□□□ -1.88
ZNF548Q8NEK5 Y_RNA.711-201ENST00000516993 102 ntBASIC3.32□□□□□ -1.88
ZNF548Q8NEK5 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.32□□□□□ -1.88
ZNF548Q8NEK5 APOOP3-201ENST00000536787 586 ntBASIC3.32□□□□□ -1.88
ZNF548Q8NEK5 AP000763.2-201ENST00000540641 163 ntBASIC3.32□□□□□ -1.88
ZNF548Q8NEK5 IMMP1LP2-201ENST00000552954 492 ntBASIC3.32□□□□□ -1.88
ZNF548Q8NEK5 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.32□□□□□ -1.88
ZNF548Q8NEK5 RPL23AP84-201ENST00000571193 464 ntBASIC3.32□□□□□ -1.88
ZNF548Q8NEK5 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ZNF548Q8NEK5 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
ZNF548Q8NEK5 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.32□□□□□ -1.88
ZNF548Q8NEK5 AL353748.2-201ENST00000622148 471 ntBASIC3.32□□□□□ -1.88
ZNF548Q8NEK5 MIR4275-201ENST00000636486 87 ntBASIC3.32□□□□□ -1.88
ZNF548Q8NEK5 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.32□□□□□ -1.88
ZNF548Q8NEK5 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.31□□□□□ -1.88
ZNF548Q8NEK5 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.31□□□□□ -1.88
ZNF548Q8NEK5 AL513302.2-201ENST00000562313 1842 ntBASIC3.31□□□□□ -1.88
ZNF548Q8NEK5 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.31□□□□□ -1.88
ZNF548Q8NEK5 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ZNF548Q8NEK5 RNU6-1074P-201ENST00000383995 104 ntBASIC3.31□□□□□ -1.88
ZNF548Q8NEK5 MIR606-201ENST00000384851 96 ntBASIC3.31□□□□□ -1.88
ZNF548Q8NEK5 SNORA16.2-201ENST00000390991 127 ntBASIC3.31□□□□□ -1.88
ZNF548Q8NEK5 SNORA75.4-201ENST00000391278 119 ntBASIC3.31□□□□□ -1.88
ZNF548Q8NEK5 AL360182.1-201ENST00000397433 468 ntBASIC3.31□□□□□ -1.88
ZNF548Q8NEK5 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.31□□□□□ -1.88
ZNF548Q8NEK5 RNU2-37P-201ENST00000410695 177 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms