Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SIMC1Q8NDZ2 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SIMC1Q8NDZ2 KPNA2P1-201ENST00000458289 1591 ntBASIC3.72□□□□□ -1.81
SIMC1Q8NDZ2 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.71□□□□□ -1.82
SIMC1Q8NDZ2 AL137003.2-201ENST00000606924 2538 ntBASIC3.71□□□□□ -1.82
SIMC1Q8NDZ2 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.71□□□□□ -1.82
SIMC1Q8NDZ2 SNORA60-201ENST00000362396 134 ntBASIC3.71□□□□□ -1.82
SIMC1Q8NDZ2 Y_RNA.47-201ENST00000362697 108 ntBASIC3.71□□□□□ -1.82
SIMC1Q8NDZ2 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.71□□□□□ -1.82
SIMC1Q8NDZ2 Y_RNA.557-201ENST00000384680 107 ntBASIC3.71□□□□□ -1.82
SIMC1Q8NDZ2 MIR449B-201ENST00000384995 97 ntBASIC3.71□□□□□ -1.82
SIMC1Q8NDZ2 PTMAP5-201ENST00000393073 333 ntBASIC3.71□□□□□ -1.82
SIMC1Q8NDZ2 SNORA11.2-201ENST00000408318 127 ntBASIC3.71□□□□□ -1.82
SIMC1Q8NDZ2 RN7SKP58-201ENST00000411010 305 ntBASIC3.71□□□□□ -1.82
SIMC1Q8NDZ2 HMGB3P2-201ENST00000411913 584 ntBASIC3.71□□□□□ -1.82
SIMC1Q8NDZ2 BX682237.1-201ENST00000415016 335 ntBASIC3.71□□□□□ -1.82
SIMC1Q8NDZ2 UBE2D3P2-201ENST00000424409 445 ntBASIC3.71□□□□□ -1.82
SIMC1Q8NDZ2 AL691449.1-201ENST00000426570 421 ntBASIC3.71□□□□□ -1.82
SIMC1Q8NDZ2 CBX3P6-201ENST00000430257 527 ntBASIC3.71□□□□□ -1.82
SIMC1Q8NDZ2 HMGB3P8-201ENST00000449709 577 ntBASIC3.71□□□□□ -1.82
SIMC1Q8NDZ2 RPL23AP14-201ENST00000468281 468 ntBASIC3.71□□□□□ -1.82
SIMC1Q8NDZ2 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC3.71□□□□□ -1.82
SIMC1Q8NDZ2 RPL30P14-201ENST00000482744 348 ntBASIC3.71□□□□□ -1.82
SIMC1Q8NDZ2 RN7SL432P-201ENST00000484057 298 ntBASIC3.71□□□□□ -1.82
SIMC1Q8NDZ2 RPL32P34-201ENST00000486380 400 ntBASIC3.71□□□□□ -1.82
SIMC1Q8NDZ2 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.71□□□□□ -1.82
SIMC1Q8NDZ2 AC097473.1-201ENST00000508142 408 ntBASIC3.71□□□□□ -1.82
SIMC1Q8NDZ2 RNU6-685P-201ENST00000517088 95 ntBASIC3.71□□□□□ -1.82
SIMC1Q8NDZ2 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.71□□□□□ -1.82
SIMC1Q8NDZ2 YPEL5P3-201ENST00000547227 352 ntBASIC3.71□□□□□ -1.82
SIMC1Q8NDZ2 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.71□□□□□ -1.82
SIMC1Q8NDZ2 AC010653.1-201ENST00000571108 881 ntBASIC3.71□□□□□ -1.82
SIMC1Q8NDZ2 MIR5047-201ENST00000579212 100 ntBASIC3.71□□□□□ -1.82
SIMC1Q8NDZ2 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.71□□□□□ -1.82
SIMC1Q8NDZ2 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.71□□□□□ -1.82
SIMC1Q8NDZ2 AC053481.4-201ENST00000583164 216 ntBASIC3.71□□□□□ -1.82
SIMC1Q8NDZ2 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.71□□□□□ -1.82
SIMC1Q8NDZ2 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.71□□□□□ -1.82
SIMC1Q8NDZ2 AC091167.4-201ENST00000605079 184 ntBASIC3.71□□□□□ -1.82
SIMC1Q8NDZ2 AC011373.1-201ENST00000607270 237 ntBASIC3.71□□□□□ -1.82
SIMC1Q8NDZ2 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.71□□□□□ -1.82
SIMC1Q8NDZ2 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.71□□□□□ -1.82
SIMC1Q8NDZ2 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.71□□□□□ -1.82
SIMC1Q8NDZ2 FAM157A-202ENST00000615155 405 ntBASIC3.71□□□□□ -1.82
SIMC1Q8NDZ2 AC007485.1-201ENST00000616755 206 ntBASIC3.71□□□□□ -1.82
SIMC1Q8NDZ2 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.71□□□□□ -1.82
SIMC1Q8NDZ2 AC010378.1-201ENST00000619270 362 ntBASIC3.71□□□□□ -1.82
SIMC1Q8NDZ2 Z69720.2-201ENST00000624755 279 ntBASIC3.71□□□□□ -1.82
SIMC1Q8NDZ2 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
SIMC1Q8NDZ2 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
SIMC1Q8NDZ2 AC103710.2-202ENST00000641454 2853 ntBASIC3.71□□□□□ -1.82
SIMC1Q8NDZ2 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
SIMC1Q8NDZ2 AC022336.2-201ENST00000568966 2538 ntBASIC3.71□□□□□ -1.82
SIMC1Q8NDZ2 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.7□□□□□ -1.82
SIMC1Q8NDZ2 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.7□□□□□ -1.82
SIMC1Q8NDZ2 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
SIMC1Q8NDZ2 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SIMC1Q8NDZ2 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
SIMC1Q8NDZ2 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
SIMC1Q8NDZ2 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.7□□□□□ -1.82
SIMC1Q8NDZ2 Y_RNA.149-201ENST00000363558 117 ntBASIC3.7□□□□□ -1.82
SIMC1Q8NDZ2 RNU6-593P-201ENST00000364716 112 ntBASIC3.7□□□□□ -1.82
SIMC1Q8NDZ2 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SIMC1Q8NDZ2 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
SIMC1Q8NDZ2 SNORA75B-201ENST00000384053 137 ntBASIC3.7□□□□□ -1.82
SIMC1Q8NDZ2 RNU6-890P-201ENST00000384121 107 ntBASIC3.7□□□□□ -1.82
SIMC1Q8NDZ2 Y_RNA.527-201ENST00000384573 102 ntBASIC3.7□□□□□ -1.82
SIMC1Q8NDZ2 RNU6-328P-201ENST00000390887 106 ntBASIC3.7□□□□□ -1.82
SIMC1Q8NDZ2 AL391417.1-201ENST00000404100 426 ntBASIC3.7□□□□□ -1.82
SIMC1Q8NDZ2 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.7□□□□□ -1.82
SIMC1Q8NDZ2 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.7□□□□□ -1.82
SIMC1Q8NDZ2 HMGB1P27-201ENST00000431429 603 ntBASIC3.7□□□□□ -1.82
SIMC1Q8NDZ2 SNAP23P1-201ENST00000433229 246 ntBASIC3.7□□□□□ -1.82
SIMC1Q8NDZ2 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.7□□□□□ -1.82
SIMC1Q8NDZ2 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.7□□□□□ -1.82
SIMC1Q8NDZ2 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.7□□□□□ -1.82
SIMC1Q8NDZ2 AL590664.1-201ENST00000448065 339 ntBASIC3.7□□□□□ -1.82
SIMC1Q8NDZ2 RPL12P25-201ENST00000455592 494 ntBASIC3.7□□□□□ -1.82
SIMC1Q8NDZ2 DYNLL1P5-201ENST00000467158 270 ntBASIC3.7□□□□□ -1.82
SIMC1Q8NDZ2 HMGB1P30-201ENST00000492455 606 ntBASIC3.7□□□□□ -1.82
SIMC1Q8NDZ2 SNORA25.10-201ENST00000515926 124 ntBASIC3.7□□□□□ -1.82
SIMC1Q8NDZ2 RNA5SP179-201ENST00000517284 121 ntBASIC3.7□□□□□ -1.82
SIMC1Q8NDZ2 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
SIMC1Q8NDZ2 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.7□□□□□ -1.82
SIMC1Q8NDZ2 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.7□□□□□ -1.82
SIMC1Q8NDZ2 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.7□□□□□ -1.82
SIMC1Q8NDZ2 ATP1B3P1-201ENST00000605365 821 ntBASIC3.7□□□□□ -1.82
SIMC1Q8NDZ2 AL442067.1-201ENST00000613261 223 ntBASIC3.7□□□□□ -1.82
SIMC1Q8NDZ2 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SIMC1Q8NDZ2 AC092628.2-201ENST00000622492 339 ntBASIC3.7□□□□□ -1.82
SIMC1Q8NDZ2 AC092608.2-201ENST00000624427 218 ntBASIC3.7□□□□□ -1.82
SIMC1Q8NDZ2 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SIMC1Q8NDZ2 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SIMC1Q8NDZ2 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SIMC1Q8NDZ2 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.7□□□□□ -1.82
SIMC1Q8NDZ2 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SIMC1Q8NDZ2 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
SIMC1Q8NDZ2 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SIMC1Q8NDZ2 AC091152.2-201ENST00000591628 2569 ntBASIC3.69□□□□□ -1.82
SIMC1Q8NDZ2 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms