Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 AC005046.1-201ENST00000608515 625 ntBASIC4.43□□□□□ -1.7
PHC3Q8NDX5 AC023043.4-201ENST00000612081 449 ntBASIC4.43□□□□□ -1.7
PHC3Q8NDX5 MIR5701-2-201ENST00000615634 82 ntBASIC4.43□□□□□ -1.7
PHC3Q8NDX5 U2.1-201ENST00000618978 145 ntBASIC4.43□□□□□ -1.7
PHC3Q8NDX5 U4.7-201ENST00000638126 106 ntBASIC4.43□□□□□ -1.7
PHC3Q8NDX5 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PHC3Q8NDX5 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PHC3Q8NDX5 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PHC3Q8NDX5 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
PHC3Q8NDX5 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PHC3Q8NDX5 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PHC3Q8NDX5 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
PHC3Q8NDX5 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.42□□□□□ -1.7
PHC3Q8NDX5 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
PHC3Q8NDX5 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.42□□□□□ -1.7
PHC3Q8NDX5 RNU6-227P-201ENST00000362865 103 ntBASIC4.42□□□□□ -1.7
PHC3Q8NDX5 RNU6-428P-201ENST00000362942 107 ntBASIC4.42□□□□□ -1.7
PHC3Q8NDX5 RNY3P11-201ENST00000364153 102 ntBASIC4.42□□□□□ -1.7
PHC3Q8NDX5 RNU4-50P-201ENST00000364361 141 ntBASIC4.42□□□□□ -1.7
PHC3Q8NDX5 RNU6-72P-201ENST00000384285 79 ntBASIC4.42□□□□□ -1.7
PHC3Q8NDX5 Y_RNA.551-201ENST00000384661 102 ntBASIC4.42□□□□□ -1.7
PHC3Q8NDX5 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PHC3Q8NDX5 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.42□□□□□ -1.7
PHC3Q8NDX5 RNA5SP129-201ENST00000410276 118 ntBASIC4.42□□□□□ -1.7
PHC3Q8NDX5 RNU6-847P-201ENST00000411115 108 ntBASIC4.42□□□□□ -1.7
PHC3Q8NDX5 RAD17P1-201ENST00000418130 2042 ntBASIC4.42□□□□□ -1.7
PHC3Q8NDX5 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.42□□□□□ -1.7
PHC3Q8NDX5 NDUFB4P6-201ENST00000436819 366 ntBASIC4.42□□□□□ -1.7
PHC3Q8NDX5 AL356535.1-201ENST00000440335 398 ntBASIC4.42□□□□□ -1.7
PHC3Q8NDX5 snoU109.2-201ENST00000459316 135 ntBASIC4.42□□□□□ -1.7
PHC3Q8NDX5 RPS26P15-201ENST00000488067 348 ntBASIC4.42□□□□□ -1.7
PHC3Q8NDX5 RPL30P10-201ENST00000488148 337 ntBASIC4.42□□□□□ -1.7
PHC3Q8NDX5 AL132838.2-201ENST00000492041 314 ntBASIC4.42□□□□□ -1.7
PHC3Q8NDX5 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.42□□□□□ -1.7
PHC3Q8NDX5 AC091144.1-201ENST00000519573 138 ntBASIC4.42□□□□□ -1.7
PHC3Q8NDX5 IFITM8P-201ENST00000522529 394 ntBASIC4.42□□□□□ -1.7
PHC3Q8NDX5 MIR4715-201ENST00000584117 79 ntBASIC4.42□□□□□ -1.7
PHC3Q8NDX5 RPS29P30-201ENST00000600975 111 ntBASIC4.42□□□□□ -1.7
PHC3Q8NDX5 AC008962.1-201ENST00000605729 304 ntBASIC4.42□□□□□ -1.7
PHC3Q8NDX5 AC009318.2-201ENST00000610917 651 ntBASIC4.42□□□□□ -1.7
PHC3Q8NDX5 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.42□□□□□ -1.7
PHC3Q8NDX5 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
PHC3Q8NDX5 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PHC3Q8NDX5 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PHC3Q8NDX5 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.41□□□□□ -1.7
PHC3Q8NDX5 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.41□□□□□ -1.7
PHC3Q8NDX5 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
PHC3Q8NDX5 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PHC3Q8NDX5 Y_RNA.276-201ENST00000364732 109 ntBASIC4.41□□□□□ -1.7
PHC3Q8NDX5 SNORA51.11-201ENST00000384442 131 ntBASIC4.41□□□□□ -1.7
PHC3Q8NDX5 SNORA69.1-201ENST00000390904 137 ntBASIC4.41□□□□□ -1.7
PHC3Q8NDX5 U3.42-201ENST00000408746 214 ntBASIC4.41□□□□□ -1.7
PHC3Q8NDX5 Y_RNA.625-201ENST00000411256 107 ntBASIC4.41□□□□□ -1.7
PHC3Q8NDX5 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.41□□□□□ -1.7
PHC3Q8NDX5 DNAJC19P7-201ENST00000428811 344 ntBASIC4.41□□□□□ -1.7
PHC3Q8NDX5 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.41□□□□□ -1.7
PHC3Q8NDX5 DYNLT3P2-201ENST00000442517 295 ntBASIC4.41□□□□□ -1.7
PHC3Q8NDX5 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC4.41□□□□□ -1.7
PHC3Q8NDX5 RNU7-170P-201ENST00000459303 61 ntBASIC4.41□□□□□ -1.7
PHC3Q8NDX5 RPL21P104-201ENST00000464143 478 ntBASIC4.41□□□□□ -1.7
PHC3Q8NDX5 RNY3P15-201ENST00000516297 97 ntBASIC4.41□□□□□ -1.7
PHC3Q8NDX5 RNU6-911P-201ENST00000516523 104 ntBASIC4.41□□□□□ -1.7
PHC3Q8NDX5 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PHC3Q8NDX5 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.41□□□□□ -1.7
PHC3Q8NDX5 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC4.41□□□□□ -1.7
PHC3Q8NDX5 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.41□□□□□ -1.7
PHC3Q8NDX5 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.41□□□□□ -1.7
PHC3Q8NDX5 AC091905.2-201ENST00000623143 306 ntBASIC4.41□□□□□ -1.7
PHC3Q8NDX5 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC4.41□□□□□ -1.7
PHC3Q8NDX5 AC022336.2-201ENST00000568966 2538 ntBASIC4.41□□□□□ -1.7
PHC3Q8NDX5 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PHC3Q8NDX5 CPHL1P-201ENST00000461341 3407 ntBASIC4.41□□□□□ -1.7
PHC3Q8NDX5 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PHC3Q8NDX5 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.41□□□□□ -1.7
PHC3Q8NDX5 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
PHC3Q8NDX5 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
PHC3Q8NDX5 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.4□□□□□ -1.7
PHC3Q8NDX5 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.4□□□□□ -1.7
PHC3Q8NDX5 MTND5P7-201ENST00000413558 1798 ntBASIC4.4□□□□□ -1.7
PHC3Q8NDX5 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.4□□□□□ -1.7
PHC3Q8NDX5 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.4□□□□□ -1.7
PHC3Q8NDX5 AC018555.1-201ENST00000567548 1980 ntBASIC4.4□□□□□ -1.7
PHC3Q8NDX5 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
PHC3Q8NDX5 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
PHC3Q8NDX5 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
PHC3Q8NDX5 RNU6-78P-201ENST00000362897 107 ntBASIC4.4□□□□□ -1.71
PHC3Q8NDX5 RNU6-907P-201ENST00000390924 102 ntBASIC4.4□□□□□ -1.71
PHC3Q8NDX5 U3.22-201ENST00000391120 215 ntBASIC4.4□□□□□ -1.71
PHC3Q8NDX5 MTCYBP2-201ENST00000407745 171 ntBASIC4.4□□□□□ -1.71
PHC3Q8NDX5 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.4□□□□□ -1.71
PHC3Q8NDX5 USP9YP16-201ENST00000430287 407 ntBASIC4.4□□□□□ -1.71
PHC3Q8NDX5 AC012671.1-201ENST00000451912 203 ntBASIC4.4□□□□□ -1.71
PHC3Q8NDX5 USP9YP23-201ENST00000455085 407 ntBASIC4.4□□□□□ -1.71
PHC3Q8NDX5 CEACAMP4-201ENST00000457676 421 ntBASIC4.4□□□□□ -1.71
PHC3Q8NDX5 RN7SL283P-201ENST00000489055 303 ntBASIC4.4□□□□□ -1.71
PHC3Q8NDX5 RN7SL812P-201ENST00000493791 279 ntBASIC4.4□□□□□ -1.71
PHC3Q8NDX5 RPL7P47-201ENST00000497299 556 ntBASIC4.4□□□□□ -1.71
PHC3Q8NDX5 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.4□□□□□ -1.71
PHC3Q8NDX5 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PHC3Q8NDX5 AL590705.4-201ENST00000532209 134 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 160 ms