Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
PRPF38AQ8NAV1 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.02□□□□□ -1.77
PRPF38AQ8NAV1 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PRPF38AQ8NAV1 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.02□□□□□ -1.77
PRPF38AQ8NAV1 AL021368.2-201ENST00000606125 5352 ntBASIC4.02□□□□□ -1.77
PRPF38AQ8NAV1 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PRPF38AQ8NAV1 CASC19-280ENST00000642102 1351 ntBASIC4.02□□□□□ -1.77
PRPF38AQ8NAV1 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PRPF38AQ8NAV1 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.01□□□□□ -1.77
PRPF38AQ8NAV1 MIR34A-201ENST00000385130 110 ntBASIC4.01□□□□□ -1.77
PRPF38AQ8NAV1 RNU6-332P-201ENST00000391193 108 ntBASIC4.01□□□□□ -1.77
PRPF38AQ8NAV1 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.01□□□□□ -1.77
PRPF38AQ8NAV1 BX682237.1-201ENST00000415016 335 ntBASIC4.01□□□□□ -1.77
PRPF38AQ8NAV1 MTND4LP11-201ENST00000422184 280 ntBASIC4.01□□□□□ -1.77
PRPF38AQ8NAV1 AC006989.1-201ENST00000427212 131 ntBASIC4.01□□□□□ -1.77
PRPF38AQ8NAV1 ARF4P2-201ENST00000430209 526 ntBASIC4.01□□□□□ -1.77
PRPF38AQ8NAV1 AL627311.1-201ENST00000431514 115 ntBASIC4.01□□□□□ -1.77
PRPF38AQ8NAV1 CYCSP32-201ENST00000440548 321 ntBASIC4.01□□□□□ -1.77
PRPF38AQ8NAV1 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.01□□□□□ -1.77
PRPF38AQ8NAV1 RNU7-23P-201ENST00000459465 62 ntBASIC4.01□□□□□ -1.77
PRPF38AQ8NAV1 AC007547.1-201ENST00000462177 490 ntBASIC4.01□□□□□ -1.77
PRPF38AQ8NAV1 RPS27AP10-201ENST00000496103 208 ntBASIC4.01□□□□□ -1.77
PRPF38AQ8NAV1 MTCYBP18-201ENST00000501056 747 ntBASIC4.01□□□□□ -1.77
PRPF38AQ8NAV1 AC009901.1-201ENST00000506703 541 ntBASIC4.01□□□□□ -1.77
PRPF38AQ8NAV1 CCDC34P1-201ENST00000507441 517 ntBASIC4.01□□□□□ -1.77
PRPF38AQ8NAV1 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.01□□□□□ -1.77
PRPF38AQ8NAV1 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.01□□□□□ -1.77
PRPF38AQ8NAV1 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.01□□□□□ -1.77
PRPF38AQ8NAV1 LRRC37A5P-203ENST00000580181 585 ntBASIC4.01□□□□□ -1.77
PRPF38AQ8NAV1 MIR4425-201ENST00000580572 84 ntBASIC4.01□□□□□ -1.77
PRPF38AQ8NAV1 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.01□□□□□ -1.77
PRPF38AQ8NAV1 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.01□□□□□ -1.77
PRPF38AQ8NAV1 AL161629.2-201ENST00000615347 275 ntBASIC4.01□□□□□ -1.77
PRPF38AQ8NAV1 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.01□□□□□ -1.77
PRPF38AQ8NAV1 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC4.01□□□□□ -1.77
PRPF38AQ8NAV1 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
PRPF38AQ8NAV1 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.01□□□□□ -1.77
PRPF38AQ8NAV1 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
PRPF38AQ8NAV1 AC121333.1-201ENST00000567488 2709 ntBASIC4.01□□□□□ -1.77
PRPF38AQ8NAV1 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
PRPF38AQ8NAV1 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4□□□□□ -1.77
PRPF38AQ8NAV1 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4□□□□□ -1.77
PRPF38AQ8NAV1 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PRPF38AQ8NAV1 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
PRPF38AQ8NAV1 Y_RNA.72-201ENST00000362894 103 ntBASIC4□□□□□ -1.77
PRPF38AQ8NAV1 RNU6-658P-201ENST00000384606 106 ntBASIC4□□□□□ -1.77
PRPF38AQ8NAV1 U3.19-201ENST00000390893 196 ntBASIC4□□□□□ -1.77
PRPF38AQ8NAV1 RNA5SP219-201ENST00000390940 113 ntBASIC4□□□□□ -1.77
PRPF38AQ8NAV1 RNU6-876P-201ENST00000391295 104 ntBASIC4□□□□□ -1.77
PRPF38AQ8NAV1 RPL5P18-201ENST00000406671 891 ntBASIC4□□□□□ -1.77
PRPF38AQ8NAV1 Y_RNA.623-201ENST00000411128 95 ntBASIC4□□□□□ -1.77
PRPF38AQ8NAV1 RNU6-607P-201ENST00000411283 108 ntBASIC4□□□□□ -1.77
PRPF38AQ8NAV1 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4□□□□□ -1.77
PRPF38AQ8NAV1 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC4□□□□□ -1.77
PRPF38AQ8NAV1 MTND3P10-201ENST00000450967 341 ntBASIC4□□□□□ -1.77
PRPF38AQ8NAV1 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4□□□□□ -1.77
PRPF38AQ8NAV1 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC4□□□□□ -1.77
PRPF38AQ8NAV1 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4□□□□□ -1.77
PRPF38AQ8NAV1 AC018710.1-201ENST00000506509 158 ntBASIC4□□□□□ -1.77
PRPF38AQ8NAV1 AC098799.2-201ENST00000509466 868 ntBASIC4□□□□□ -1.77
PRPF38AQ8NAV1 FCF1P8-201ENST00000510322 597 ntBASIC4□□□□□ -1.77
PRPF38AQ8NAV1 MIR892C-201ENST00000516410 77 ntBASIC4□□□□□ -1.77
PRPF38AQ8NAV1 AC069113.1-201ENST00000517763 267 ntBASIC4□□□□□ -1.77
PRPF38AQ8NAV1 CYCSP27-201ENST00000527643 293 ntBASIC4□□□□□ -1.77
PRPF38AQ8NAV1 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC4□□□□□ -1.77
PRPF38AQ8NAV1 AC073539.2-201ENST00000597113 165 ntBASIC4□□□□□ -1.77
PRPF38AQ8NAV1 AC092747.3-201ENST00000603769 301 ntBASIC4□□□□□ -1.77
PRPF38AQ8NAV1 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4□□□□□ -1.77
PRPF38AQ8NAV1 RMST_4.1-201ENST00000616886 107 ntBASIC4□□□□□ -1.77
PRPF38AQ8NAV1 AC103705.1-201ENST00000619013 241 ntBASIC4□□□□□ -1.77
PRPF38AQ8NAV1 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4□□□□□ -1.77
PRPF38AQ8NAV1 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4□□□□□ -1.77
PRPF38AQ8NAV1 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
PRPF38AQ8NAV1 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4□□□□□ -1.77
PRPF38AQ8NAV1 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
PRPF38AQ8NAV1 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.99□□□□□ -1.77
PRPF38AQ8NAV1 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.99□□□□□ -1.77
PRPF38AQ8NAV1 AL391417.1-201ENST00000404100 426 ntBASIC3.99□□□□□ -1.77
PRPF38AQ8NAV1 RPS4XP7-201ENST00000406274 780 ntBASIC3.99□□□□□ -1.77
PRPF38AQ8NAV1 AL356776.1-201ENST00000406574 447 ntBASIC3.99□□□□□ -1.77
PRPF38AQ8NAV1 BX323014.1-201ENST00000412876 237 ntBASIC3.99□□□□□ -1.77
PRPF38AQ8NAV1 RPLP0P7-201ENST00000416050 667 ntBASIC3.99□□□□□ -1.77
PRPF38AQ8NAV1 RPL31P12-201ENST00000422587 358 ntBASIC3.99□□□□□ -1.77
PRPF38AQ8NAV1 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.99□□□□□ -1.77
PRPF38AQ8NAV1 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.99□□□□□ -1.77
PRPF38AQ8NAV1 RPL21P40-201ENST00000428586 483 ntBASIC3.99□□□□□ -1.77
PRPF38AQ8NAV1 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.99□□□□□ -1.77
PRPF38AQ8NAV1 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.99□□□□□ -1.77
PRPF38AQ8NAV1 AL583843.1-201ENST00000456070 346 ntBASIC3.99□□□□□ -1.77
PRPF38AQ8NAV1 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.99□□□□□ -1.77
PRPF38AQ8NAV1 DYNLL1P5-201ENST00000467158 270 ntBASIC3.99□□□□□ -1.77
PRPF38AQ8NAV1 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.99□□□□□ -1.77
PRPF38AQ8NAV1 AC114786.4-201ENST00000508771 728 ntBASIC3.99□□□□□ -1.77
PRPF38AQ8NAV1 AC025465.4-201ENST00000513422 638 ntBASIC3.99□□□□□ -1.77
PRPF38AQ8NAV1 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.99□□□□□ -1.77
PRPF38AQ8NAV1 RN7SKP57-201ENST00000517248 293 ntBASIC3.99□□□□□ -1.77
PRPF38AQ8NAV1 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.99□□□□□ -1.77
PRPF38AQ8NAV1 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.99□□□□□ -1.77
PRPF38AQ8NAV1 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.99□□□□□ -1.77
PRPF38AQ8NAV1 AC006557.5-201ENST00000603126 811 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms