Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC4.78□□□□□ -1.64
DEPDC4Q8N2C3 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
DEPDC4Q8N2C3 Y_RNA.82-201ENST00000363000 102 ntBASIC4.78□□□□□ -1.64
DEPDC4Q8N2C3 Y_RNA.92-201ENST00000363043 102 ntBASIC4.78□□□□□ -1.64
DEPDC4Q8N2C3 Y_RNA.122-201ENST00000363331 96 ntBASIC4.78□□□□□ -1.64
DEPDC4Q8N2C3 RNU6-626P-201ENST00000363354 107 ntBASIC4.78□□□□□ -1.64
DEPDC4Q8N2C3 Y_RNA.235-201ENST00000364412 102 ntBASIC4.78□□□□□ -1.64
DEPDC4Q8N2C3 RNU6-740P-201ENST00000364734 105 ntBASIC4.78□□□□□ -1.64
DEPDC4Q8N2C3 Y_RNA.292-201ENST00000364904 97 ntBASIC4.78□□□□□ -1.64
DEPDC4Q8N2C3 Y_RNA.306-201ENST00000365015 102 ntBASIC4.78□□□□□ -1.64
DEPDC4Q8N2C3 Y_RNA.312-201ENST00000365089 102 ntBASIC4.78□□□□□ -1.64
DEPDC4Q8N2C3 Y_RNA.322-201ENST00000365151 102 ntBASIC4.78□□□□□ -1.64
DEPDC4Q8N2C3 RNU6-487P-201ENST00000365430 104 ntBASIC4.78□□□□□ -1.64
DEPDC4Q8N2C3 RNU6-171P-201ENST00000384354 107 ntBASIC4.78□□□□□ -1.64
DEPDC4Q8N2C3 MIR544A-201ENST00000384855 91 ntBASIC4.78□□□□□ -1.64
DEPDC4Q8N2C3 MIR585-201ENST00000384887 94 ntBASIC4.78□□□□□ -1.64
DEPDC4Q8N2C3 U3.19-201ENST00000390893 196 ntBASIC4.78□□□□□ -1.64
DEPDC4Q8N2C3 SNORA26.3-201ENST00000391119 136 ntBASIC4.78□□□□□ -1.64
DEPDC4Q8N2C3 RNU4-30P-201ENST00000410245 143 ntBASIC4.78□□□□□ -1.64
DEPDC4Q8N2C3 RN7SKP125-201ENST00000410481 302 ntBASIC4.78□□□□□ -1.64
DEPDC4Q8N2C3 HSPE1P12-201ENST00000412576 301 ntBASIC4.78□□□□□ -1.64
DEPDC4Q8N2C3 GAPDHP25-201ENST00000447061 1001 ntBASIC4.78□□□□□ -1.64
DEPDC4Q8N2C3 HMGN2P10-201ENST00000448085 265 ntBASIC4.78□□□□□ -1.64
DEPDC4Q8N2C3 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.78□□□□□ -1.64
DEPDC4Q8N2C3 AL645939.1-201ENST00000453429 797 ntBASIC4.78□□□□□ -1.64
DEPDC4Q8N2C3 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.78□□□□□ -1.64
DEPDC4Q8N2C3 Y_RNA.650-201ENST00000459002 102 ntBASIC4.78□□□□□ -1.64
DEPDC4Q8N2C3 RN7SL329P-201ENST00000467740 299 ntBASIC4.78□□□□□ -1.64
DEPDC4Q8N2C3 Y_RNA.777-201ENST00000516982 102 ntBASIC4.78□□□□□ -1.64
DEPDC4Q8N2C3 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.78□□□□□ -1.64
DEPDC4Q8N2C3 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.78□□□□□ -1.64
DEPDC4Q8N2C3 AC011602.1-201ENST00000546484 331 ntBASIC4.78□□□□□ -1.64
DEPDC4Q8N2C3 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.78□□□□□ -1.64
DEPDC4Q8N2C3 AC009163.5-201ENST00000575421 637 ntBASIC4.78□□□□□ -1.64
DEPDC4Q8N2C3 MIR3910-1-201ENST00000580936 111 ntBASIC4.78□□□□□ -1.64
DEPDC4Q8N2C3 Y_RNA.771-201ENST00000598668 102 ntBASIC4.78□□□□□ -1.64
DEPDC4Q8N2C3 AC072026.1-201ENST00000605023 201 ntBASIC4.78□□□□□ -1.64
DEPDC4Q8N2C3 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.78□□□□□ -1.64
DEPDC4Q8N2C3 Y_RNA.789-201ENST00000622480 102 ntBASIC4.78□□□□□ -1.64
DEPDC4Q8N2C3 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.78□□□□□ -1.64
DEPDC4Q8N2C3 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
DEPDC4Q8N2C3 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
DEPDC4Q8N2C3 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
DEPDC4Q8N2C3 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
DEPDC4Q8N2C3 AC107068.1-201ENST00000563286 4218 ntBASIC4.78□□□□□ -1.64
DEPDC4Q8N2C3 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
DEPDC4Q8N2C3 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
DEPDC4Q8N2C3 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
DEPDC4Q8N2C3 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.78□□□□□ -1.64
DEPDC4Q8N2C3 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.65
DEPDC4Q8N2C3 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
DEPDC4Q8N2C3 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.77□□□□□ -1.65
DEPDC4Q8N2C3 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.77□□□□□ -1.65
DEPDC4Q8N2C3 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
DEPDC4Q8N2C3 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
DEPDC4Q8N2C3 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
DEPDC4Q8N2C3 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
DEPDC4Q8N2C3 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
DEPDC4Q8N2C3 AC139713.2-215ENST00000641428 5037 ntBASIC4.77□□□□□ -1.65
DEPDC4Q8N2C3 Y_RNA.136-201ENST00000363444 102 ntBASIC4.77□□□□□ -1.65
DEPDC4Q8N2C3 RNU6-682P-201ENST00000363843 106 ntBASIC4.77□□□□□ -1.65
DEPDC4Q8N2C3 RNU6-1280P-201ENST00000365211 107 ntBASIC4.77□□□□□ -1.65
DEPDC4Q8N2C3 RNU6-514P-201ENST00000384208 107 ntBASIC4.77□□□□□ -1.65
DEPDC4Q8N2C3 AL035079.1-201ENST00000405210 287 ntBASIC4.77□□□□□ -1.65
DEPDC4Q8N2C3 RNA5SP390-201ENST00000410191 113 ntBASIC4.77□□□□□ -1.65
DEPDC4Q8N2C3 RNU6-1001P-201ENST00000411265 100 ntBASIC4.77□□□□□ -1.65
DEPDC4Q8N2C3 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.77□□□□□ -1.65
DEPDC4Q8N2C3 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.77□□□□□ -1.65
DEPDC4Q8N2C3 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.77□□□□□ -1.65
DEPDC4Q8N2C3 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.77□□□□□ -1.65
DEPDC4Q8N2C3 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.77□□□□□ -1.65
DEPDC4Q8N2C3 RN7SL860P-201ENST00000473738 223 ntBASIC4.77□□□□□ -1.65
DEPDC4Q8N2C3 RPL7AP6-201ENST00000477943 801 ntBASIC4.77□□□□□ -1.65
DEPDC4Q8N2C3 AKIRIN2P1-201ENST00000505898 352 ntBASIC4.77□□□□□ -1.65
DEPDC4Q8N2C3 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.77□□□□□ -1.65
DEPDC4Q8N2C3 AC006427.1-201ENST00000514359 712 ntBASIC4.77□□□□□ -1.65
DEPDC4Q8N2C3 RN7SKP122-201ENST00000515923 296 ntBASIC4.77□□□□□ -1.65
DEPDC4Q8N2C3 CYCSP23-201ENST00000519781 313 ntBASIC4.77□□□□□ -1.65
DEPDC4Q8N2C3 AP004607.2-201ENST00000533949 322 ntBASIC4.77□□□□□ -1.65
DEPDC4Q8N2C3 AL391261.3-201ENST00000557194 520 ntBASIC4.77□□□□□ -1.65
DEPDC4Q8N2C3 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.77□□□□□ -1.65
DEPDC4Q8N2C3 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.77□□□□□ -1.65
DEPDC4Q8N2C3 CR381572.2-201ENST00000624852 397 ntBASIC4.77□□□□□ -1.65
DEPDC4Q8N2C3 ANKRD36BP1-201ENST00000358576 1779 ntBASIC4.77□□□□□ -1.65
DEPDC4Q8N2C3 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.77□□□□□ -1.65
DEPDC4Q8N2C3 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC4.77□□□□□ -1.65
DEPDC4Q8N2C3 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
DEPDC4Q8N2C3 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
DEPDC4Q8N2C3 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
DEPDC4Q8N2C3 AC087190.4-201ENST00000574616 8334 ntBASIC4.76□□□□□ -1.65
DEPDC4Q8N2C3 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
DEPDC4Q8N2C3 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.76□□□□□ -1.65
DEPDC4Q8N2C3 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.76□□□□□ -1.65
DEPDC4Q8N2C3 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
DEPDC4Q8N2C3 RNU6-20P-201ENST00000384106 107 ntBASIC4.76□□□□□ -1.65
DEPDC4Q8N2C3 SNORA46.1-201ENST00000391069 153 ntBASIC4.76□□□□□ -1.65
DEPDC4Q8N2C3 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.76□□□□□ -1.65
DEPDC4Q8N2C3 COX6B1P7-201ENST00000430845 235 ntBASIC4.76□□□□□ -1.65
DEPDC4Q8N2C3 RPL7P47-201ENST00000497299 556 ntBASIC4.76□□□□□ -1.65
DEPDC4Q8N2C3 RNU6-255P-201ENST00000516957 105 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms