Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
BEST3Q8N1M1 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
BEST3Q8N1M1 RNA5SP118-201ENST00000410385 109 ntBASIC2.96□□□□□ -1.94
BEST3Q8N1M1 RNA5SP229-201ENST00000410809 99 ntBASIC2.96□□□□□ -1.94
BEST3Q8N1M1 RNU6-373P-201ENST00000411247 98 ntBASIC2.96□□□□□ -1.94
BEST3Q8N1M1 EEF1A1P40-201ENST00000412883 573 ntBASIC2.96□□□□□ -1.94
BEST3Q8N1M1 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.96□□□□□ -1.94
BEST3Q8N1M1 AL353705.1-201ENST00000433468 480 ntBASIC2.96□□□□□ -1.94
BEST3Q8N1M1 SETP5-201ENST00000437270 562 ntBASIC2.96□□□□□ -1.94
BEST3Q8N1M1 HMGN2P20-201ENST00000437531 273 ntBASIC2.96□□□□□ -1.94
BEST3Q8N1M1 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.96□□□□□ -1.94
BEST3Q8N1M1 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.96□□□□□ -1.94
BEST3Q8N1M1 RPL12P25-201ENST00000455592 494 ntBASIC2.96□□□□□ -1.94
BEST3Q8N1M1 SCARNA18-201ENST00000459004 134 ntBASIC2.96□□□□□ -1.94
BEST3Q8N1M1 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.96□□□□□ -1.94
BEST3Q8N1M1 AC092185.1-201ENST00000491371 97 ntBASIC2.96□□□□□ -1.94
BEST3Q8N1M1 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.96□□□□□ -1.94
BEST3Q8N1M1 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.96□□□□□ -1.94
BEST3Q8N1M1 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.96□□□□□ -1.94
BEST3Q8N1M1 RNU6-928P-201ENST00000516876 104 ntBASIC2.96□□□□□ -1.94
BEST3Q8N1M1 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.96□□□□□ -1.94
BEST3Q8N1M1 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.96□□□□□ -1.94
BEST3Q8N1M1 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.96□□□□□ -1.94
BEST3Q8N1M1 AC106782.4-201ENST00000568264 210 ntBASIC2.96□□□□□ -1.94
BEST3Q8N1M1 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.96□□□□□ -1.94
BEST3Q8N1M1 MIR2682-201ENST00000580305 110 ntBASIC2.96□□□□□ -1.94
BEST3Q8N1M1 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.96□□□□□ -1.94
BEST3Q8N1M1 MIR548AC-201ENST00000585049 88 ntBASIC2.96□□□□□ -1.94
BEST3Q8N1M1 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.96□□□□□ -1.94
BEST3Q8N1M1 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.96□□□□□ -1.94
BEST3Q8N1M1 AC018692.3-201ENST00000623929 123 ntBASIC2.96□□□□□ -1.94
BEST3Q8N1M1 SNORA50A-202ENST00000629536 136 ntBASIC2.96□□□□□ -1.94
BEST3Q8N1M1 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.96□□□□□ -1.94
BEST3Q8N1M1 MIR3662-201ENST00000637030 95 ntBASIC2.96□□□□□ -1.94
BEST3Q8N1M1 AC024614.3-201ENST00000637860 256 ntBASIC2.96□□□□□ -1.94
BEST3Q8N1M1 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.96□□□□□ -1.94
BEST3Q8N1M1 OR4G1P-203ENST00000641984 1631 ntBASIC2.96□□□□□ -1.94
BEST3Q8N1M1 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
BEST3Q8N1M1 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
BEST3Q8N1M1 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.95□□□□□ -1.94
BEST3Q8N1M1 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.95□□□□□ -1.94
BEST3Q8N1M1 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.95□□□□□ -1.94
BEST3Q8N1M1 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
BEST3Q8N1M1 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
BEST3Q8N1M1 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
BEST3Q8N1M1 MIR422A-201ENST00000362286 90 ntBASIC2.95□□□□□ -1.94
BEST3Q8N1M1 RNU6-270P-201ENST00000364131 105 ntBASIC2.95□□□□□ -1.94
BEST3Q8N1M1 RNU6-1127P-201ENST00000384580 107 ntBASIC2.95□□□□□ -1.94
BEST3Q8N1M1 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
BEST3Q8N1M1 MIR888-201ENST00000401186 77 ntBASIC2.95□□□□□ -1.94
BEST3Q8N1M1 RNA5SP38-201ENST00000410750 119 ntBASIC2.95□□□□□ -1.94
BEST3Q8N1M1 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.95□□□□□ -1.94
BEST3Q8N1M1 MTND3P16-201ENST00000452205 344 ntBASIC2.95□□□□□ -1.94
BEST3Q8N1M1 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.95□□□□□ -1.94
BEST3Q8N1M1 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.95□□□□□ -1.94
BEST3Q8N1M1 RPL27AP5-201ENST00000469428 449 ntBASIC2.95□□□□□ -1.94
BEST3Q8N1M1 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.95□□□□□ -1.94
BEST3Q8N1M1 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
BEST3Q8N1M1 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.95□□□□□ -1.94
BEST3Q8N1M1 RNA5SP380-201ENST00000517190 98 ntBASIC2.95□□□□□ -1.94
BEST3Q8N1M1 IGHV3-76-201ENST00000522465 295 ntBASIC2.95□□□□□ -1.94
BEST3Q8N1M1 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.95□□□□□ -1.94
BEST3Q8N1M1 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
BEST3Q8N1M1 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.95□□□□□ -1.94
BEST3Q8N1M1 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.95□□□□□ -1.94
BEST3Q8N1M1 AC234778.2-201ENST00000566241 354 ntBASIC2.95□□□□□ -1.94
BEST3Q8N1M1 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.95□□□□□ -1.94
BEST3Q8N1M1 AC010525.2-201ENST00000590920 195 ntBASIC2.95□□□□□ -1.94
BEST3Q8N1M1 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.95□□□□□ -1.94
BEST3Q8N1M1 AL020991.1-201ENST00000612314 373 ntBASIC2.95□□□□□ -1.94
BEST3Q8N1M1 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
BEST3Q8N1M1 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
BEST3Q8N1M1 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.95□□□□□ -1.94
BEST3Q8N1M1 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.94□□□□□ -1.94
BEST3Q8N1M1 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
BEST3Q8N1M1 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
BEST3Q8N1M1 RNU4-66P-201ENST00000365199 138 ntBASIC2.94□□□□□ -1.94
BEST3Q8N1M1 RNU6-715P-201ENST00000365204 103 ntBASIC2.94□□□□□ -1.94
BEST3Q8N1M1 RNU6-1283P-201ENST00000365314 105 ntBASIC2.94□□□□□ -1.94
BEST3Q8N1M1 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.94□□□□□ -1.94
BEST3Q8N1M1 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.94□□□□□ -1.94
BEST3Q8N1M1 RNU6-38P-201ENST00000384085 107 ntBASIC2.94□□□□□ -1.94
BEST3Q8N1M1 RNU6-434P-201ENST00000384376 107 ntBASIC2.94□□□□□ -1.94
BEST3Q8N1M1 RNU6-393P-201ENST00000384475 107 ntBASIC2.94□□□□□ -1.94
BEST3Q8N1M1 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
BEST3Q8N1M1 AL592114.1-201ENST00000403842 483 ntBASIC2.94□□□□□ -1.94
BEST3Q8N1M1 RNU6-1077P-201ENST00000410506 102 ntBASIC2.94□□□□□ -1.94
BEST3Q8N1M1 RNU6-1025P-201ENST00000410629 104 ntBASIC2.94□□□□□ -1.94
BEST3Q8N1M1 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.94□□□□□ -1.94
BEST3Q8N1M1 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.94□□□□□ -1.94
BEST3Q8N1M1 ARL5AP1-201ENST00000418991 388 ntBASIC2.94□□□□□ -1.94
BEST3Q8N1M1 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.94□□□□□ -1.94
BEST3Q8N1M1 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.94□□□□□ -1.94
BEST3Q8N1M1 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.94□□□□□ -1.94
BEST3Q8N1M1 CST9LP2-201ENST00000437612 320 ntBASIC2.94□□□□□ -1.94
BEST3Q8N1M1 RNU6-333P-201ENST00000459117 107 ntBASIC2.94□□□□□ -1.94
BEST3Q8N1M1 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.94□□□□□ -1.94
BEST3Q8N1M1 MTCO3P9-201ENST00000506989 781 ntBASIC2.94□□□□□ -1.94
BEST3Q8N1M1 PRDX4P1-201ENST00000507189 574 ntBASIC2.94□□□□□ -1.94
BEST3Q8N1M1 SNORA31.1-201ENST00000515993 133 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms