Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.4□□□□□ -1.87
VPS52Q8N1B4 HIF1AP1-201ENST00000553642 175 ntBASIC3.4□□□□□ -1.87
VPS52Q8N1B4 TRAV37-201ENST00000553906 342 ntBASIC3.4□□□□□ -1.87
VPS52Q8N1B4 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.4□□□□□ -1.87
VPS52Q8N1B4 MIR4424-201ENST00000585257 86 ntBASIC3.4□□□□□ -1.87
VPS52Q8N1B4 AC098826.3-201ENST00000603823 466 ntBASIC3.4□□□□□ -1.87
VPS52Q8N1B4 AC008945.2-201ENST00000606056 604 ntBASIC3.4□□□□□ -1.87
VPS52Q8N1B4 RMST_3.1-201ENST00000611651 109 ntBASIC3.4□□□□□ -1.87
VPS52Q8N1B4 AL020991.1-201ENST00000612314 373 ntBASIC3.4□□□□□ -1.87
VPS52Q8N1B4 DISC2.1-201ENST00000612827 205 ntBASIC3.4□□□□□ -1.87
VPS52Q8N1B4 AC010338.1-201ENST00000621823 717 ntBASIC3.4□□□□□ -1.87
VPS52Q8N1B4 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
VPS52Q8N1B4 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
VPS52Q8N1B4 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
VPS52Q8N1B4 AC007785.2-201ENST00000598627 1916 ntBASIC3.39□□□□□ -1.87
VPS52Q8N1B4 UBE2L2-201ENST00000254302 429 ntBASIC3.39□□□□□ -1.87
VPS52Q8N1B4 RNU6-1167P-201ENST00000363227 94 ntBASIC3.39□□□□□ -1.87
VPS52Q8N1B4 RNU6-550P-201ENST00000391057 101 ntBASIC3.39□□□□□ -1.87
VPS52Q8N1B4 RNU6-1197P-201ENST00000391183 107 ntBASIC3.39□□□□□ -1.87
VPS52Q8N1B4 RNA5SP118-201ENST00000410385 109 ntBASIC3.39□□□□□ -1.87
VPS52Q8N1B4 RNU4-46P-201ENST00000410818 138 ntBASIC3.39□□□□□ -1.87
VPS52Q8N1B4 RNU6-1068P-201ENST00000410958 103 ntBASIC3.39□□□□□ -1.87
VPS52Q8N1B4 AC080125.1-201ENST00000414888 684 ntBASIC3.39□□□□□ -1.87
VPS52Q8N1B4 OR6C66P-201ENST00000414917 930 ntBASIC3.39□□□□□ -1.87
VPS52Q8N1B4 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.39□□□□□ -1.87
VPS52Q8N1B4 HMGB1P31-201ENST00000437242 427 ntBASIC3.39□□□□□ -1.87
VPS52Q8N1B4 AC107083.1-201ENST00000439643 279 ntBASIC3.39□□□□□ -1.87
VPS52Q8N1B4 DPPA3P1-201ENST00000448050 469 ntBASIC3.39□□□□□ -1.87
VPS52Q8N1B4 RNU7-180P-201ENST00000459240 63 ntBASIC3.39□□□□□ -1.87
VPS52Q8N1B4 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
VPS52Q8N1B4 SNORA31.1-201ENST00000515993 133 ntBASIC3.39□□□□□ -1.87
VPS52Q8N1B4 SNORA31.5-201ENST00000516190 133 ntBASIC3.39□□□□□ -1.87
VPS52Q8N1B4 RNU6-358P-201ENST00000516564 75 ntBASIC3.39□□□□□ -1.87
VPS52Q8N1B4 AC009812.2-201ENST00000517657 457 ntBASIC3.39□□□□□ -1.87
VPS52Q8N1B4 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.39□□□□□ -1.87
VPS52Q8N1B4 TRAV28-201ENST00000557548 323 ntBASIC3.39□□□□□ -1.87
VPS52Q8N1B4 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.39□□□□□ -1.87
VPS52Q8N1B4 NRBF2P5-201ENST00000603087 788 ntBASIC3.39□□□□□ -1.87
VPS52Q8N1B4 AL161798.1-201ENST00000604630 131 ntBASIC3.39□□□□□ -1.87
VPS52Q8N1B4 AC004832.5-201ENST00000608677 401 ntBASIC3.39□□□□□ -1.87
VPS52Q8N1B4 AC107294.1-201ENST00000609524 467 ntBASIC3.39□□□□□ -1.87
VPS52Q8N1B4 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
VPS52Q8N1B4 AC002076.2-201ENST00000617362 122 ntBASIC3.39□□□□□ -1.87
VPS52Q8N1B4 AC099506.2-201ENST00000623074 221 ntBASIC3.39□□□□□ -1.87
VPS52Q8N1B4 TPTE2P4-201ENST00000258589 1605 ntBASIC3.39□□□□□ -1.87
VPS52Q8N1B4 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
VPS52Q8N1B4 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
VPS52Q8N1B4 Y_RNA.88-201ENST00000363029 99 ntBASIC3.38□□□□□ -1.87
VPS52Q8N1B4 RNU6-288P-201ENST00000363690 104 ntBASIC3.38□□□□□ -1.87
VPS52Q8N1B4 SNORA5B-201ENST00000363786 132 ntBASIC3.38□□□□□ -1.87
VPS52Q8N1B4 RNA5SP229-201ENST00000410809 99 ntBASIC3.38□□□□□ -1.87
VPS52Q8N1B4 OR9R1P-201ENST00000412200 877 ntBASIC3.38□□□□□ -1.87
VPS52Q8N1B4 FABP5P13-201ENST00000452144 328 ntBASIC3.38□□□□□ -1.87
VPS52Q8N1B4 RPL23AP11-201ENST00000475260 469 ntBASIC3.38□□□□□ -1.87
VPS52Q8N1B4 AL160314.1-201ENST00000490836 438 ntBASIC3.38□□□□□ -1.87
VPS52Q8N1B4 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.38□□□□□ -1.87
VPS52Q8N1B4 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.38□□□□□ -1.87
VPS52Q8N1B4 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.38□□□□□ -1.87
VPS52Q8N1B4 AC245166.1-201ENST00000521012 253 ntBASIC3.38□□□□□ -1.87
VPS52Q8N1B4 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
VPS52Q8N1B4 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.38□□□□□ -1.87
VPS52Q8N1B4 H3F3AP1-201ENST00000559984 334 ntBASIC3.38□□□□□ -1.87
VPS52Q8N1B4 AC060780.3-201ENST00000589464 80 ntBASIC3.38□□□□□ -1.87
VPS52Q8N1B4 AL035413.2-201ENST00000604801 525 ntBASIC3.38□□□□□ -1.87
VPS52Q8N1B4 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.38□□□□□ -1.87
VPS52Q8N1B4 DUXAP9-208ENST00000622815 614 ntBASIC3.38□□□□□ -1.87
VPS52Q8N1B4 MIR3662-201ENST00000637030 95 ntBASIC3.38□□□□□ -1.87
VPS52Q8N1B4 AC024614.3-201ENST00000637860 256 ntBASIC3.38□□□□□ -1.87
VPS52Q8N1B4 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
VPS52Q8N1B4 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
VPS52Q8N1B4 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
VPS52Q8N1B4 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.37□□□□□ -1.87
VPS52Q8N1B4 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
VPS52Q8N1B4 RNU6-1287P-201ENST00000362914 107 ntBASIC3.37□□□□□ -1.87
VPS52Q8N1B4 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
VPS52Q8N1B4 Y_RNA.390-201ENST00000383932 102 ntBASIC3.37□□□□□ -1.87
VPS52Q8N1B4 RNU6-1060P-201ENST00000384664 107 ntBASIC3.37□□□□□ -1.87
VPS52Q8N1B4 MIR514A2-201ENST00000385131 88 ntBASIC3.37□□□□□ -1.87
VPS52Q8N1B4 MIR514A3-201ENST00000385132 88 ntBASIC3.37□□□□□ -1.87
VPS52Q8N1B4 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.37□□□□□ -1.87
VPS52Q8N1B4 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.37□□□□□ -1.87
VPS52Q8N1B4 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.37□□□□□ -1.87
VPS52Q8N1B4 AC092047.1-201ENST00000424997 240 ntBASIC3.37□□□□□ -1.87
VPS52Q8N1B4 AL591704.1-201ENST00000432574 275 ntBASIC3.37□□□□□ -1.87
VPS52Q8N1B4 RPL36AP53-201ENST00000432891 316 ntBASIC3.37□□□□□ -1.87
VPS52Q8N1B4 Z82210.1-201ENST00000440037 231 ntBASIC3.37□□□□□ -1.87
VPS52Q8N1B4 MTATP6P23-201ENST00000440153 476 ntBASIC3.37□□□□□ -1.87
VPS52Q8N1B4 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.37□□□□□ -1.87
VPS52Q8N1B4 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.37□□□□□ -1.87
VPS52Q8N1B4 FABP5P15-201ENST00000453566 214 ntBASIC3.37□□□□□ -1.87
VPS52Q8N1B4 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.37□□□□□ -1.87
VPS52Q8N1B4 EIF4EP3-201ENST00000498782 656 ntBASIC3.37□□□□□ -1.87
VPS52Q8N1B4 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.37□□□□□ -1.87
VPS52Q8N1B4 AP001804.3-201ENST00000525146 880 ntBASIC3.37□□□□□ -1.87
VPS52Q8N1B4 CASP1P1-201ENST00000526345 212 ntBASIC3.37□□□□□ -1.87
VPS52Q8N1B4 AC118273.2-201ENST00000532092 465 ntBASIC3.37□□□□□ -1.87
VPS52Q8N1B4 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.37□□□□□ -1.87
VPS52Q8N1B4 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.37□□□□□ -1.87
VPS52Q8N1B4 uc_338.25-201ENST00000613756 156 ntBASIC3.37□□□□□ -1.87
VPS52Q8N1B4 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 150.4 ms