Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.3□□□□□ -1.56
SCUBE3Q8IX30 RPS29P33-201ENST00000456717 146 ntBASIC5.3□□□□□ -1.56
SCUBE3Q8IX30 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
SCUBE3Q8IX30 RN7SL441P-201ENST00000492388 296 ntBASIC5.3□□□□□ -1.56
SCUBE3Q8IX30 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC5.3□□□□□ -1.56
SCUBE3Q8IX30 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.3□□□□□ -1.56
SCUBE3Q8IX30 COX6B1P5-201ENST00000509843 249 ntBASIC5.3□□□□□ -1.56
SCUBE3Q8IX30 RN7SKP122-201ENST00000515923 296 ntBASIC5.3□□□□□ -1.56
SCUBE3Q8IX30 RNA5SP76-201ENST00000516277 87 ntBASIC5.3□□□□□ -1.56
SCUBE3Q8IX30 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC5.3□□□□□ -1.56
SCUBE3Q8IX30 MIR4691-201ENST00000583764 85 ntBASIC5.3□□□□□ -1.56
SCUBE3Q8IX30 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SCUBE3Q8IX30 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SCUBE3Q8IX30 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SCUBE3Q8IX30 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SCUBE3Q8IX30 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SCUBE3Q8IX30 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC5.3□□□□□ -1.56
SCUBE3Q8IX30 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
SCUBE3Q8IX30 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SCUBE3Q8IX30 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.29□□□□□ -1.56
SCUBE3Q8IX30 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
SCUBE3Q8IX30 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SCUBE3Q8IX30 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SCUBE3Q8IX30 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.29□□□□□ -1.56
SCUBE3Q8IX30 SNORD32A-201ENST00000364805 84 ntBASIC5.29□□□□□ -1.56
SCUBE3Q8IX30 RNA5SP187-201ENST00000384400 119 ntBASIC5.29□□□□□ -1.56
SCUBE3Q8IX30 SNORA66-201ENST00000384792 133 ntBASIC5.29□□□□□ -1.56
SCUBE3Q8IX30 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SCUBE3Q8IX30 RNU6-763P-201ENST00000390865 106 ntBASIC5.29□□□□□ -1.56
SCUBE3Q8IX30 RNU2-68P-201ENST00000410878 191 ntBASIC5.29□□□□□ -1.56
SCUBE3Q8IX30 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC5.29□□□□□ -1.56
SCUBE3Q8IX30 AL450023.3-201ENST00000440592 271 ntBASIC5.29□□□□□ -1.56
SCUBE3Q8IX30 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.29□□□□□ -1.56
SCUBE3Q8IX30 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.29□□□□□ -1.56
SCUBE3Q8IX30 U8.19-201ENST00000459095 133 ntBASIC5.29□□□□□ -1.56
SCUBE3Q8IX30 RPL21P126-201ENST00000470049 478 ntBASIC5.29□□□□□ -1.56
SCUBE3Q8IX30 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.29□□□□□ -1.56
SCUBE3Q8IX30 FCF1P8-201ENST00000510322 597 ntBASIC5.29□□□□□ -1.56
SCUBE3Q8IX30 RNA5SP43-201ENST00000516559 110 ntBASIC5.29□□□□□ -1.56
SCUBE3Q8IX30 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.29□□□□□ -1.56
SCUBE3Q8IX30 AP001340.1-201ENST00000624405 217 ntBASIC5.29□□□□□ -1.56
SCUBE3Q8IX30 SNORA43.4-201ENST00000629559 138 ntBASIC5.29□□□□□ -1.56
SCUBE3Q8IX30 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SCUBE3Q8IX30 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SCUBE3Q8IX30 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.29□□□□□ -1.56
SCUBE3Q8IX30 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SCUBE3Q8IX30 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SCUBE3Q8IX30 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SCUBE3Q8IX30 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.28□□□□□ -1.56
SCUBE3Q8IX30 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
SCUBE3Q8IX30 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.28□□□□□ -1.56
SCUBE3Q8IX30 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
SCUBE3Q8IX30 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
SCUBE3Q8IX30 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
SCUBE3Q8IX30 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SCUBE3Q8IX30 RNA5SP428-201ENST00000365129 132 ntBASIC5.28□□□□□ -1.56
SCUBE3Q8IX30 RNU6-1310P-201ENST00000384153 107 ntBASIC5.28□□□□□ -1.56
SCUBE3Q8IX30 SNORA70.10-201ENST00000384515 134 ntBASIC5.28□□□□□ -1.56
SCUBE3Q8IX30 RNU6ATAC19P-201ENST00000408096 110 ntBASIC5.28□□□□□ -1.56
SCUBE3Q8IX30 RPL23AP95-201ENST00000426806 265 ntBASIC5.28□□□□□ -1.56
SCUBE3Q8IX30 AC007919.1-201ENST00000429380 217 ntBASIC5.28□□□□□ -1.56
SCUBE3Q8IX30 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.28□□□□□ -1.56
SCUBE3Q8IX30 RPL12P46-201ENST00000436610 195 ntBASIC5.28□□□□□ -1.56
SCUBE3Q8IX30 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC5.28□□□□□ -1.56
SCUBE3Q8IX30 AL354714.3-201ENST00000447284 493 ntBASIC5.28□□□□□ -1.56
SCUBE3Q8IX30 RN7SL385P-201ENST00000468873 276 ntBASIC5.28□□□□□ -1.56
SCUBE3Q8IX30 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.28□□□□□ -1.56
SCUBE3Q8IX30 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC5.28□□□□□ -1.56
SCUBE3Q8IX30 RNU6-1256P-201ENST00000516539 103 ntBASIC5.28□□□□□ -1.56
SCUBE3Q8IX30 RNA5SP54-201ENST00000516951 92 ntBASIC5.28□□□□□ -1.56
SCUBE3Q8IX30 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.28□□□□□ -1.56
SCUBE3Q8IX30 AC024581.2-201ENST00000619986 252 ntBASIC5.28□□□□□ -1.56
SCUBE3Q8IX30 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC5.28□□□□□ -1.56
SCUBE3Q8IX30 AC091932.3-201ENST00000624223 323 ntBASIC5.28□□□□□ -1.56
SCUBE3Q8IX30 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SCUBE3Q8IX30 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
SCUBE3Q8IX30 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.28□□□□□ -1.56
SCUBE3Q8IX30 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SCUBE3Q8IX30 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SCUBE3Q8IX30 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SCUBE3Q8IX30 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.27□□□□□ -1.57
SCUBE3Q8IX30 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
SCUBE3Q8IX30 AC092376.2-201ENST00000622621 4116 ntBASIC5.27□□□□□ -1.57
SCUBE3Q8IX30 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.27□□□□□ -1.57
SCUBE3Q8IX30 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.27□□□□□ -1.57
SCUBE3Q8IX30 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
SCUBE3Q8IX30 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SCUBE3Q8IX30 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SCUBE3Q8IX30 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.27□□□□□ -1.57
SCUBE3Q8IX30 AK9-203ENST00000368948 2478 ntTSL 5 BASIC5.27□□□□□ -1.57
SCUBE3Q8IX30 RNU2-54P-201ENST00000410299 190 ntBASIC5.27□□□□□ -1.57
SCUBE3Q8IX30 CYP4F29P-201ENST00000420685 446 ntBASIC5.27□□□□□ -1.57
SCUBE3Q8IX30 BPY2DP-201ENST00000422208 265 ntBASIC5.27□□□□□ -1.57
SCUBE3Q8IX30 AC079780.1-201ENST00000428259 207 ntBASIC5.27□□□□□ -1.57
SCUBE3Q8IX30 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.27□□□□□ -1.57
SCUBE3Q8IX30 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC5.27□□□□□ -1.57
SCUBE3Q8IX30 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC5.27□□□□□ -1.57
SCUBE3Q8IX30 RPS29P9-201ENST00000440360 171 ntBASIC5.27□□□□□ -1.57
SCUBE3Q8IX30 EIF4A1P11-201ENST00000451239 222 ntBASIC5.27□□□□□ -1.57
SCUBE3Q8IX30 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms