Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.1□□□□□ -1.75
ATG4DQ86TL0 RN7SL481P-201ENST00000477764 299 ntBASIC4.1□□□□□ -1.75
ATG4DQ86TL0 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.1□□□□□ -1.75
ATG4DQ86TL0 SNORD116-25-201ENST00000516517 92 ntBASIC4.1□□□□□ -1.75
ATG4DQ86TL0 RNU6-1315P-201ENST00000517187 99 ntBASIC4.1□□□□□ -1.75
ATG4DQ86TL0 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC4.1□□□□□ -1.75
ATG4DQ86TL0 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.1□□□□□ -1.75
ATG4DQ86TL0 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.1□□□□□ -1.75
ATG4DQ86TL0 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
ATG4DQ86TL0 MIR4715-201ENST00000584117 79 ntBASIC4.1□□□□□ -1.75
ATG4DQ86TL0 AL355812.1-201ENST00000603215 216 ntBASIC4.1□□□□□ -1.75
ATG4DQ86TL0 AC123786.2-201ENST00000603459 275 ntBASIC4.1□□□□□ -1.75
ATG4DQ86TL0 AC073349.3-201ENST00000617616 186 ntBASIC4.1□□□□□ -1.75
ATG4DQ86TL0 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.1□□□□□ -1.75
ATG4DQ86TL0 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
ATG4DQ86TL0 AC090617.7-201ENST00000623952 126 ntBASIC4.1□□□□□ -1.75
ATG4DQ86TL0 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC4.1□□□□□ -1.75
ATG4DQ86TL0 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ATG4DQ86TL0 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC4.1□□□□□ -1.75
ATG4DQ86TL0 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
ATG4DQ86TL0 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ATG4DQ86TL0 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ATG4DQ86TL0 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
ATG4DQ86TL0 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
ATG4DQ86TL0 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ATG4DQ86TL0 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ATG4DQ86TL0 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.09□□□□□ -1.75
ATG4DQ86TL0 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
ATG4DQ86TL0 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
ATG4DQ86TL0 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
ATG4DQ86TL0 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
ATG4DQ86TL0 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.09□□□□□ -1.75
ATG4DQ86TL0 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.09□□□□□ -1.75
ATG4DQ86TL0 AL391516.1-201ENST00000554380 2449 ntBASIC4.09□□□□□ -1.75
ATG4DQ86TL0 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.09□□□□□ -1.75
ATG4DQ86TL0 UBE2WP1-201ENST00000362030 340 ntBASIC4.09□□□□□ -1.75
ATG4DQ86TL0 RNU6-428P-201ENST00000362942 107 ntBASIC4.09□□□□□ -1.75
ATG4DQ86TL0 RNU6-1155P-201ENST00000363554 107 ntBASIC4.09□□□□□ -1.75
ATG4DQ86TL0 Y_RNA.446-201ENST00000384178 104 ntBASIC4.09□□□□□ -1.75
ATG4DQ86TL0 RNU6-318P-201ENST00000384283 103 ntBASIC4.09□□□□□ -1.75
ATG4DQ86TL0 MIR659-201ENST00000384963 97 ntBASIC4.09□□□□□ -1.75
ATG4DQ86TL0 RNA5SP372-201ENST00000390836 115 ntBASIC4.09□□□□□ -1.75
ATG4DQ86TL0 RNU2-43P-201ENST00000410306 190 ntBASIC4.09□□□□□ -1.75
ATG4DQ86TL0 AC009237.10-201ENST00000414112 510 ntBASIC4.09□□□□□ -1.75
ATG4DQ86TL0 CYCSP10-201ENST00000417973 294 ntBASIC4.09□□□□□ -1.75
ATG4DQ86TL0 AC024067.1-201ENST00000426199 223 ntBASIC4.09□□□□□ -1.75
ATG4DQ86TL0 RPL23AP1-201ENST00000428990 471 ntBASIC4.09□□□□□ -1.75
ATG4DQ86TL0 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.09□□□□□ -1.75
ATG4DQ86TL0 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC4.09□□□□□ -1.75
ATG4DQ86TL0 TPT1P12-201ENST00000448968 492 ntBASIC4.09□□□□□ -1.75
ATG4DQ86TL0 snoU13.1-201ENST00000459157 104 ntBASIC4.09□□□□□ -1.75
ATG4DQ86TL0 RN7SL41P-201ENST00000476144 297 ntBASIC4.09□□□□□ -1.75
ATG4DQ86TL0 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.09□□□□□ -1.75
ATG4DQ86TL0 APOOP4-201ENST00000513530 597 ntBASIC4.09□□□□□ -1.75
ATG4DQ86TL0 RNA5SP471-201ENST00000516971 106 ntBASIC4.09□□□□□ -1.75
ATG4DQ86TL0 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.09□□□□□ -1.75
ATG4DQ86TL0 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.09□□□□□ -1.75
ATG4DQ86TL0 AL157871.3-201ENST00000557231 293 ntBASIC4.09□□□□□ -1.75
ATG4DQ86TL0 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.09□□□□□ -1.75
ATG4DQ86TL0 MIR1273C-201ENST00000578669 77 ntBASIC4.09□□□□□ -1.75
ATG4DQ86TL0 AC023575.1-201ENST00000580510 358 ntBASIC4.09□□□□□ -1.75
ATG4DQ86TL0 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.09□□□□□ -1.75
ATG4DQ86TL0 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.09□□□□□ -1.75
ATG4DQ86TL0 AP000787.2-201ENST00000604432 568 ntBASIC4.09□□□□□ -1.75
ATG4DQ86TL0 AC005828.6-201ENST00000606610 232 ntBASIC4.09□□□□□ -1.75
ATG4DQ86TL0 AC091979.2-201ENST00000607514 214 ntBASIC4.09□□□□□ -1.75
ATG4DQ86TL0 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.09□□□□□ -1.75
ATG4DQ86TL0 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.09□□□□□ -1.75
ATG4DQ86TL0 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
ATG4DQ86TL0 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.09□□□□□ -1.75
ATG4DQ86TL0 AC139713.2-214ENST00000642059 1811 ntBASIC4.09□□□□□ -1.76
ATG4DQ86TL0 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
ATG4DQ86TL0 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
ATG4DQ86TL0 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
ATG4DQ86TL0 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
ATG4DQ86TL0 LINC01355-201ENST00000566551 5444 ntBASIC4.08□□□□□ -1.76
ATG4DQ86TL0 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
ATG4DQ86TL0 AL133243.3-201ENST00000617415 3004 ntBASIC4.08□□□□□ -1.76
ATG4DQ86TL0 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
ATG4DQ86TL0 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.08□□□□□ -1.76
ATG4DQ86TL0 SCN1A-220ENST00000641603 12506 ntBASIC4.08□□□□□ -1.76
ATG4DQ86TL0 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.08□□□□□ -1.76
ATG4DQ86TL0 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
ATG4DQ86TL0 SNORD113.2-201ENST00000364166 89 ntBASIC4.08□□□□□ -1.76
ATG4DQ86TL0 RNU6-879P-201ENST00000364328 108 ntBASIC4.08□□□□□ -1.76
ATG4DQ86TL0 RNU1-44P-201ENST00000384453 163 ntBASIC4.08□□□□□ -1.76
ATG4DQ86TL0 RNA5SP56-201ENST00000410277 118 ntBASIC4.08□□□□□ -1.76
ATG4DQ86TL0 OOSP1P1-201ENST00000423265 274 ntBASIC4.08□□□□□ -1.76
ATG4DQ86TL0 AC010154.1-201ENST00000425857 269 ntBASIC4.08□□□□□ -1.76
ATG4DQ86TL0 RPS12P10-201ENST00000427031 377 ntBASIC4.08□□□□□ -1.76
ATG4DQ86TL0 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.08□□□□□ -1.76
ATG4DQ86TL0 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.08□□□□□ -1.76
ATG4DQ86TL0 AC016700.2-201ENST00000446011 156 ntBASIC4.08□□□□□ -1.76
ATG4DQ86TL0 AC009237.7-201ENST00000447357 229 ntBASIC4.08□□□□□ -1.76
ATG4DQ86TL0 UQCRBP2-201ENST00000447827 297 ntBASIC4.08□□□□□ -1.76
ATG4DQ86TL0 MRPS10P1-201ENST00000448483 130 ntBASIC4.08□□□□□ -1.76
ATG4DQ86TL0 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.08□□□□□ -1.76
ATG4DQ86TL0 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
ATG4DQ86TL0 AC012671.1-201ENST00000451912 203 ntBASIC4.08□□□□□ -1.76
ATG4DQ86TL0 SNORD2.1-201ENST00000458762 69 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms