Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 Y_RNA.399-201ENST00000383955 105 ntBASIC3.93□□□□□ -1.78
UBE3BQ7Z3V4 RNU6-1227P-201ENST00000383981 107 ntBASIC3.93□□□□□ -1.78
UBE3BQ7Z3V4 RNU6-1013P-201ENST00000384180 107 ntBASIC3.93□□□□□ -1.78
UBE3BQ7Z3V4 RNU6-817P-201ENST00000391083 104 ntBASIC3.93□□□□□ -1.78
UBE3BQ7Z3V4 UBA52P6-201ENST00000399822 382 ntBASIC3.93□□□□□ -1.78
UBE3BQ7Z3V4 HSPE1P26-201ENST00000405341 275 ntBASIC3.93□□□□□ -1.78
UBE3BQ7Z3V4 AL138885.1-201ENST00000405921 675 ntBASIC3.93□□□□□ -1.78
UBE3BQ7Z3V4 AL354751.2-201ENST00000415471 210 ntBASIC3.93□□□□□ -1.78
UBE3BQ7Z3V4 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.93□□□□□ -1.78
UBE3BQ7Z3V4 AC024082.2-201ENST00000434771 238 ntBASIC3.93□□□□□ -1.78
UBE3BQ7Z3V4 NDUFA5P4-201ENST00000436704 385 ntBASIC3.93□□□□□ -1.78
UBE3BQ7Z3V4 AC006539.3-201ENST00000454258 129 ntBASIC3.93□□□□□ -1.78
UBE3BQ7Z3V4 HMGB1P22-201ENST00000505315 124 ntBASIC3.93□□□□□ -1.78
UBE3BQ7Z3V4 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.93□□□□□ -1.78
UBE3BQ7Z3V4 SCARNA20.6-201ENST00000517251 106 ntBASIC3.93□□□□□ -1.78
UBE3BQ7Z3V4 AC090136.1-201ENST00000520009 240 ntBASIC3.93□□□□□ -1.78
UBE3BQ7Z3V4 AC011602.1-201ENST00000546484 331 ntBASIC3.93□□□□□ -1.78
UBE3BQ7Z3V4 AL442663.2-201ENST00000554385 511 ntBASIC3.93□□□□□ -1.78
UBE3BQ7Z3V4 MTCO3P23-201ENST00000561363 289 ntBASIC3.93□□□□□ -1.78
UBE3BQ7Z3V4 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.93□□□□□ -1.78
UBE3BQ7Z3V4 AL138889.2-201ENST00000603883 242 ntBASIC3.93□□□□□ -1.78
UBE3BQ7Z3V4 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.93□□□□□ -1.78
UBE3BQ7Z3V4 Z82243.1-201ENST00000609432 473 ntBASIC3.93□□□□□ -1.78
UBE3BQ7Z3V4 AL359547.2-201ENST00000615810 418 ntBASIC3.93□□□□□ -1.78
UBE3BQ7Z3V4 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.93□□□□□ -1.78
UBE3BQ7Z3V4 AP001350.1-201ENST00000601906 1524 ntBASIC3.93□□□□□ -1.78
UBE3BQ7Z3V4 SDAD1P2-201ENST00000441308 2028 ntBASIC3.93□□□□□ -1.78
UBE3BQ7Z3V4 SNORD113-7-201ENST00000363762 77 ntBASIC3.92□□□□□ -1.78
UBE3BQ7Z3V4 Y_RNA.339-201ENST00000365325 102 ntBASIC3.92□□□□□ -1.78
UBE3BQ7Z3V4 Y_RNA.387-201ENST00000383918 102 ntBASIC3.92□□□□□ -1.78
UBE3BQ7Z3V4 snosnR66.1-201ENST00000391095 99 ntBASIC3.92□□□□□ -1.78
UBE3BQ7Z3V4 EIF4E2P1-201ENST00000393781 255 ntBASIC3.92□□□□□ -1.78
UBE3BQ7Z3V4 MIR1302-11-201ENST00000408051 138 ntBASIC3.92□□□□□ -1.78
UBE3BQ7Z3V4 MIR1302-9-201ENST00000408365 138 ntBASIC3.92□□□□□ -1.78
UBE3BQ7Z3V4 MIR1302-10-201ENST00000408734 138 ntBASIC3.92□□□□□ -1.78
UBE3BQ7Z3V4 AL591704.1-201ENST00000432574 275 ntBASIC3.92□□□□□ -1.78
UBE3BQ7Z3V4 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.92□□□□□ -1.78
UBE3BQ7Z3V4 AC104058.1-201ENST00000448028 297 ntBASIC3.92□□□□□ -1.78
UBE3BQ7Z3V4 TRBV1-201ENST00000476502 284 ntBASIC3.92□□□□□ -1.78
UBE3BQ7Z3V4 TRBVA-201ENST00000498804 316 ntBASIC3.92□□□□□ -1.78
UBE3BQ7Z3V4 KLHL2P1-201ENST00000508691 521 ntBASIC3.92□□□□□ -1.78
UBE3BQ7Z3V4 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.92□□□□□ -1.78
UBE3BQ7Z3V4 RNU6-677P-201ENST00000516914 101 ntBASIC3.92□□□□□ -1.78
UBE3BQ7Z3V4 RNU6-840P-201ENST00000517275 65 ntBASIC3.92□□□□□ -1.78
UBE3BQ7Z3V4 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.92□□□□□ -1.78
UBE3BQ7Z3V4 AP000889.2-201ENST00000532684 490 ntBASIC3.92□□□□□ -1.78
UBE3BQ7Z3V4 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.92□□□□□ -1.78
UBE3BQ7Z3V4 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.92□□□□□ -1.78
UBE3BQ7Z3V4 AC005951.2-201ENST00000576282 495 ntBASIC3.92□□□□□ -1.78
UBE3BQ7Z3V4 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.92□□□□□ -1.78
UBE3BQ7Z3V4 AL451007.1-201ENST00000595491 289 ntBASIC3.92□□□□□ -1.78
UBE3BQ7Z3V4 AC092747.3-201ENST00000603769 301 ntBASIC3.92□□□□□ -1.78
UBE3BQ7Z3V4 MIR1302-2-201ENST00000607096 138 ntBASIC3.92□□□□□ -1.78
UBE3BQ7Z3V4 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.92□□□□□ -1.78
UBE3BQ7Z3V4 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.92□□□□□ -1.78
UBE3BQ7Z3V4 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
UBE3BQ7Z3V4 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
UBE3BQ7Z3V4 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
UBE3BQ7Z3V4 ZNF807-201ENST00000328088 1707 ntBASIC3.92□□□□□ -1.78
UBE3BQ7Z3V4 PWAR6-201ENST00000552334 4618 ntBASIC3.92□□□□□ -1.78
UBE3BQ7Z3V4 AC004925.1-201ENST00000624256 2706 ntBASIC3.92□□□□□ -1.78
UBE3BQ7Z3V4 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
UBE3BQ7Z3V4 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.91□□□□□ -1.78
UBE3BQ7Z3V4 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
UBE3BQ7Z3V4 Y_RNA.212-201ENST00000364177 102 ntBASIC3.91□□□□□ -1.78
UBE3BQ7Z3V4 Y_RNA.384-201ENST00000383909 102 ntBASIC3.91□□□□□ -1.78
UBE3BQ7Z3V4 RNU6-190P-201ENST00000384154 102 ntBASIC3.91□□□□□ -1.78
UBE3BQ7Z3V4 SNORD67-201ENST00000390833 111 ntBASIC3.91□□□□□ -1.78
UBE3BQ7Z3V4 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
UBE3BQ7Z3V4 RPL7P10-201ENST00000417407 739 ntBASIC3.91□□□□□ -1.78
UBE3BQ7Z3V4 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.91□□□□□ -1.78
UBE3BQ7Z3V4 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.91□□□□□ -1.78
UBE3BQ7Z3V4 FABP5P13-201ENST00000452144 328 ntBASIC3.91□□□□□ -1.78
UBE3BQ7Z3V4 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.91□□□□□ -1.78
UBE3BQ7Z3V4 Y_RNA.632-201ENST00000459189 102 ntBASIC3.91□□□□□ -1.78
UBE3BQ7Z3V4 AC010401.1-201ENST00000463867 348 ntBASIC3.91□□□□□ -1.78
UBE3BQ7Z3V4 NDUFB4P9-201ENST00000511646 388 ntBASIC3.91□□□□□ -1.78
UBE3BQ7Z3V4 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.91□□□□□ -1.78
UBE3BQ7Z3V4 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.91□□□□□ -1.78
UBE3BQ7Z3V4 RNU6-189P-201ENST00000516120 101 ntBASIC3.91□□□□□ -1.78
UBE3BQ7Z3V4 Y_RNA.689-201ENST00000516589 107 ntBASIC3.91□□□□□ -1.78
UBE3BQ7Z3V4 SNORA31.20-201ENST00000517111 133 ntBASIC3.91□□□□□ -1.78
UBE3BQ7Z3V4 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.91□□□□□ -1.78
UBE3BQ7Z3V4 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.91□□□□□ -1.78
UBE3BQ7Z3V4 AC012182.1-201ENST00000570133 895 ntBASIC3.91□□□□□ -1.78
UBE3BQ7Z3V4 MIR3942-201ENST00000585264 109 ntBASIC3.91□□□□□ -1.78
UBE3BQ7Z3V4 POLR3GP2-201ENST00000588366 668 ntBASIC3.91□□□□□ -1.78
UBE3BQ7Z3V4 AL670379.4-201ENST00000605279 254 ntBASIC3.91□□□□□ -1.78
UBE3BQ7Z3V4 AL133255.1-201ENST00000606374 441 ntBASIC3.91□□□□□ -1.78
UBE3BQ7Z3V4 AC103710.3-201ENST00000608157 948 ntBASIC3.91□□□□□ -1.78
UBE3BQ7Z3V4 uc_338.15-201ENST00000615470 191 ntBASIC3.91□□□□□ -1.78
UBE3BQ7Z3V4 AC048347.1-201ENST00000624621 427 ntBASIC3.91□□□□□ -1.78
UBE3BQ7Z3V4 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
UBE3BQ7Z3V4 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.9□□□□□ -1.78
UBE3BQ7Z3V4 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.78
UBE3BQ7Z3V4 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.78
UBE3BQ7Z3V4 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
UBE3BQ7Z3V4 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.9□□□□□ -1.79
UBE3BQ7Z3V4 Y_RNA.419-201ENST00000384041 102 ntBASIC3.9□□□□□ -1.79
UBE3BQ7Z3V4 SNORA16.2-201ENST00000390991 127 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms