Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
BHLHA9Q7RTU4 AC092125.1-201ENST00000562568 1995 ntBASIC3.42□□□□□ -1.86
BHLHA9Q7RTU4 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
BHLHA9Q7RTU4 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
BHLHA9Q7RTU4 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
BHLHA9Q7RTU4 SNORD50.2-201ENST00000365465 70 ntBASIC3.42□□□□□ -1.86
BHLHA9Q7RTU4 Y_RNA.378-201ENST00000365652 113 ntBASIC3.42□□□□□ -1.86
BHLHA9Q7RTU4 Y_RNA.380-201ENST00000365663 111 ntBASIC3.42□□□□□ -1.86
BHLHA9Q7RTU4 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.42□□□□□ -1.86
BHLHA9Q7RTU4 SUGT1P1-201ENST00000379514 476 ntBASIC3.42□□□□□ -1.86
BHLHA9Q7RTU4 RNU6-44P-201ENST00000384045 107 ntBASIC3.42□□□□□ -1.86
BHLHA9Q7RTU4 Y_RNA.478-201ENST00000384358 107 ntBASIC3.42□□□□□ -1.86
BHLHA9Q7RTU4 RNU6-601P-201ENST00000384540 107 ntBASIC3.42□□□□□ -1.86
BHLHA9Q7RTU4 Y_RNA.577-201ENST00000384794 101 ntBASIC3.42□□□□□ -1.86
BHLHA9Q7RTU4 RNU6-55P-201ENST00000411092 107 ntBASIC3.42□□□□□ -1.86
BHLHA9Q7RTU4 RHEBP3-201ENST00000411920 351 ntBASIC3.42□□□□□ -1.86
BHLHA9Q7RTU4 AL139156.1-201ENST00000412785 841 ntBASIC3.42□□□□□ -1.86
BHLHA9Q7RTU4 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.42□□□□□ -1.86
BHLHA9Q7RTU4 AC012065.2-201ENST00000421295 375 ntBASIC3.42□□□□□ -1.86
BHLHA9Q7RTU4 AL353705.1-201ENST00000433468 480 ntBASIC3.42□□□□□ -1.86
BHLHA9Q7RTU4 AL138799.3-201ENST00000438968 350 ntBASIC3.42□□□□□ -1.86
BHLHA9Q7RTU4 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.42□□□□□ -1.86
BHLHA9Q7RTU4 AL136380.1-201ENST00000447970 162 ntBASIC3.42□□□□□ -1.86
BHLHA9Q7RTU4 AL139109.1-201ENST00000455491 297 ntBASIC3.42□□□□□ -1.86
BHLHA9Q7RTU4 AC006499.2-201ENST00000513470 337 ntBASIC3.42□□□□□ -1.86
BHLHA9Q7RTU4 SCARNA24.1-201ENST00000516465 137 ntBASIC3.42□□□□□ -1.86
BHLHA9Q7RTU4 RN7SKP234-201ENST00000517173 224 ntBASIC3.42□□□□□ -1.86
BHLHA9Q7RTU4 AC011602.1-201ENST00000546484 331 ntBASIC3.42□□□□□ -1.86
BHLHA9Q7RTU4 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.42□□□□□ -1.86
BHLHA9Q7RTU4 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.42□□□□□ -1.86
BHLHA9Q7RTU4 AC092447.9-201ENST00000603395 144 ntBASIC3.42□□□□□ -1.86
BHLHA9Q7RTU4 RMST_8.1-201ENST00000610287 165 ntBASIC3.42□□□□□ -1.86
BHLHA9Q7RTU4 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.42□□□□□ -1.86
BHLHA9Q7RTU4 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.42□□□□□ -1.86
BHLHA9Q7RTU4 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
BHLHA9Q7RTU4 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.42□□□□□ -1.86
BHLHA9Q7RTU4 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
BHLHA9Q7RTU4 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
BHLHA9Q7RTU4 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
BHLHA9Q7RTU4 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
BHLHA9Q7RTU4 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.41□□□□□ -1.86
BHLHA9Q7RTU4 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
BHLHA9Q7RTU4 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.41□□□□□ -1.86
BHLHA9Q7RTU4 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
BHLHA9Q7RTU4 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.41□□□□□ -1.86
BHLHA9Q7RTU4 RNU6-682P-201ENST00000363843 106 ntBASIC3.41□□□□□ -1.86
BHLHA9Q7RTU4 SNORD27-201ENST00000363981 72 ntBASIC3.41□□□□□ -1.86
BHLHA9Q7RTU4 RNU6-153P-201ENST00000364422 104 ntBASIC3.41□□□□□ -1.86
BHLHA9Q7RTU4 RNU6-215P-201ENST00000365169 102 ntBASIC3.41□□□□□ -1.86
BHLHA9Q7RTU4 SNORA20.2-201ENST00000383922 131 ntBASIC3.41□□□□□ -1.86
BHLHA9Q7RTU4 Y_RNA.416-201ENST00000384014 113 ntBASIC3.41□□□□□ -1.86
BHLHA9Q7RTU4 SNORA22C-201ENST00000384614 134 ntBASIC3.41□□□□□ -1.86
BHLHA9Q7RTU4 RNU6-713P-201ENST00000384761 107 ntBASIC3.41□□□□□ -1.86
BHLHA9Q7RTU4 SNORA75.6-201ENST00000391318 127 ntBASIC3.41□□□□□ -1.86
BHLHA9Q7RTU4 RN7SKP266-201ENST00000410232 287 ntBASIC3.41□□□□□ -1.86
BHLHA9Q7RTU4 OR6C66P-201ENST00000414917 930 ntBASIC3.41□□□□□ -1.86
BHLHA9Q7RTU4 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.41□□□□□ -1.86
BHLHA9Q7RTU4 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.41□□□□□ -1.86
BHLHA9Q7RTU4 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.41□□□□□ -1.86
BHLHA9Q7RTU4 PPIAP17-201ENST00000438507 471 ntBASIC3.41□□□□□ -1.86
BHLHA9Q7RTU4 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.41□□□□□ -1.86
BHLHA9Q7RTU4 AC073910.1-201ENST00000445047 438 ntBASIC3.41□□□□□ -1.86
BHLHA9Q7RTU4 AL353752.1-201ENST00000454946 260 ntBASIC3.41□□□□□ -1.86
BHLHA9Q7RTU4 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.41□□□□□ -1.86
BHLHA9Q7RTU4 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.41□□□□□ -1.86
BHLHA9Q7RTU4 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
BHLHA9Q7RTU4 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.41□□□□□ -1.86
BHLHA9Q7RTU4 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.41□□□□□ -1.86
BHLHA9Q7RTU4 AC107393.1-201ENST00000512403 346 ntBASIC3.41□□□□□ -1.86
BHLHA9Q7RTU4 RNU6-470P-201ENST00000515954 104 ntBASIC3.41□□□□□ -1.86
BHLHA9Q7RTU4 RNU6-583P-201ENST00000516012 92 ntBASIC3.41□□□□□ -1.86
BHLHA9Q7RTU4 RNU6-1038P-201ENST00000516516 104 ntBASIC3.41□□□□□ -1.86
BHLHA9Q7RTU4 RNU6-885P-201ENST00000516607 104 ntBASIC3.41□□□□□ -1.86
BHLHA9Q7RTU4 RNU6-844P-201ENST00000517175 102 ntBASIC3.41□□□□□ -1.86
BHLHA9Q7RTU4 RNU6-1261P-201ENST00000517194 104 ntBASIC3.41□□□□□ -1.86
BHLHA9Q7RTU4 SCARNA20.6-201ENST00000517251 106 ntBASIC3.41□□□□□ -1.86
BHLHA9Q7RTU4 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.41□□□□□ -1.86
BHLHA9Q7RTU4 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.41□□□□□ -1.86
BHLHA9Q7RTU4 HSPE1P20-201ENST00000538133 289 ntBASIC3.41□□□□□ -1.86
BHLHA9Q7RTU4 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.41□□□□□ -1.86
BHLHA9Q7RTU4 HIGD1AP1-201ENST00000550979 275 ntBASIC3.41□□□□□ -1.86
BHLHA9Q7RTU4 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.41□□□□□ -1.86
BHLHA9Q7RTU4 MIR5680-201ENST00000577577 84 ntBASIC3.41□□□□□ -1.86
BHLHA9Q7RTU4 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.41□□□□□ -1.86
BHLHA9Q7RTU4 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.41□□□□□ -1.86
BHLHA9Q7RTU4 AL022099.1-201ENST00000604551 712 ntBASIC3.41□□□□□ -1.86
BHLHA9Q7RTU4 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.41□□□□□ -1.86
BHLHA9Q7RTU4 uc_338.1-201ENST00000612113 180 ntBASIC3.41□□□□□ -1.86
BHLHA9Q7RTU4 MIR3651-201ENST00000630427 90 ntBASIC3.41□□□□□ -1.86
BHLHA9Q7RTU4 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.41□□□□□ -1.86
BHLHA9Q7RTU4 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
BHLHA9Q7RTU4 AC004972.1-201ENST00000623934 2209 ntBASIC3.41□□□□□ -1.86
BHLHA9Q7RTU4 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
BHLHA9Q7RTU4 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
BHLHA9Q7RTU4 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
BHLHA9Q7RTU4 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
BHLHA9Q7RTU4 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
BHLHA9Q7RTU4 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
BHLHA9Q7RTU4 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
BHLHA9Q7RTU4 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms