Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC090136.1-201ENST00000520009 240 ntBASIC2.98□□□□□ -1.93
SHFQ7M4L6 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.98□□□□□ -1.93
SHFQ7M4L6 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.98□□□□□ -1.93
SHFQ7M4L6 AC243972.3-201ENST00000539655 198 ntBASIC2.98□□□□□ -1.93
SHFQ7M4L6 NACA-211ENST00000548563 827 ntTSL 5 BASIC2.98□□□□□ -1.93
SHFQ7M4L6 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC2.98□□□□□ -1.93
SHFQ7M4L6 SCOCP1-201ENST00000554676 349 ntBASIC2.98□□□□□ -1.93
SHFQ7M4L6 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.98□□□□□ -1.93
SHFQ7M4L6 MIR3160-1-201ENST00000577972 85 ntBASIC2.98□□□□□ -1.93
SHFQ7M4L6 LRRC37A5P-203ENST00000580181 585 ntBASIC2.98□□□□□ -1.93
SHFQ7M4L6 AC008962.1-201ENST00000605729 304 ntBASIC2.98□□□□□ -1.93
SHFQ7M4L6 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SHFQ7M4L6 AC025253.1-201ENST00000613623 543 ntBASIC2.98□□□□□ -1.93
SHFQ7M4L6 AC093913.1-201ENST00000614178 329 ntBASIC2.98□□□□□ -1.93
SHFQ7M4L6 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
SHFQ7M4L6 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
SHFQ7M4L6 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC2.98□□□□□ -1.93
SHFQ7M4L6 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.98□□□□□ -1.93
SHFQ7M4L6 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
SHFQ7M4L6 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC2.97□□□□□ -1.93
SHFQ7M4L6 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
SHFQ7M4L6 RNU1-70P-201ENST00000362618 164 ntBASIC2.97□□□□□ -1.93
SHFQ7M4L6 Y_RNA.166-201ENST00000363730 102 ntBASIC2.97□□□□□ -1.93
SHFQ7M4L6 RN7SKP280-201ENST00000364196 304 ntBASIC2.97□□□□□ -1.93
SHFQ7M4L6 Y_RNA.414-201ENST00000384011 101 ntBASIC2.97□□□□□ -1.93
SHFQ7M4L6 RNU6-1035P-201ENST00000384477 107 ntBASIC2.97□□□□□ -1.93
SHFQ7M4L6 SNORA1.3-201ENST00000384676 136 ntBASIC2.97□□□□□ -1.93
SHFQ7M4L6 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
SHFQ7M4L6 RNU6-510P-201ENST00000391239 108 ntBASIC2.97□□□□□ -1.93
SHFQ7M4L6 RNU2-3P-201ENST00000410144 191 ntBASIC2.97□□□□□ -1.93
SHFQ7M4L6 RN7SKP123-201ENST00000410732 291 ntBASIC2.97□□□□□ -1.93
SHFQ7M4L6 RNU6-607P-201ENST00000411283 108 ntBASIC2.97□□□□□ -1.93
SHFQ7M4L6 RAB28P1-201ENST00000411517 641 ntBASIC2.97□□□□□ -1.93
SHFQ7M4L6 CYCSP33-201ENST00000414485 327 ntBASIC2.97□□□□□ -1.93
SHFQ7M4L6 AL353678.1-201ENST00000422735 741 ntBASIC2.97□□□□□ -1.93
SHFQ7M4L6 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC2.97□□□□□ -1.93
SHFQ7M4L6 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.97□□□□□ -1.93
SHFQ7M4L6 CST9LP2-201ENST00000437612 320 ntBASIC2.97□□□□□ -1.93
SHFQ7M4L6 AL590664.1-201ENST00000448065 339 ntBASIC2.97□□□□□ -1.93
SHFQ7M4L6 AC117503.1-201ENST00000472241 394 ntBASIC2.97□□□□□ -1.93
SHFQ7M4L6 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.97□□□□□ -1.93
SHFQ7M4L6 SNORA14.1-201ENST00000516113 141 ntBASIC2.97□□□□□ -1.93
SHFQ7M4L6 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.97□□□□□ -1.93
SHFQ7M4L6 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.97□□□□□ -1.93
SHFQ7M4L6 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.97□□□□□ -1.93
SHFQ7M4L6 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SHFQ7M4L6 AP000763.2-201ENST00000540641 163 ntBASIC2.97□□□□□ -1.93
SHFQ7M4L6 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.97□□□□□ -1.93
SHFQ7M4L6 MIR4742-201ENST00000581069 85 ntBASIC2.97□□□□□ -1.93
SHFQ7M4L6 AC091135.1-201ENST00000585943 307 ntBASIC2.97□□□□□ -1.93
SHFQ7M4L6 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.97□□□□□ -1.93
SHFQ7M4L6 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SHFQ7M4L6 AL121757.2-201ENST00000611223 313 ntBASIC2.97□□□□□ -1.93
SHFQ7M4L6 AC063943.3-201ENST00000615562 356 ntBASIC2.97□□□□□ -1.93
SHFQ7M4L6 AC002076.2-201ENST00000617362 122 ntBASIC2.97□□□□□ -1.93
SHFQ7M4L6 U2.21-201ENST00000637295 81 ntBASIC2.97□□□□□ -1.93
SHFQ7M4L6 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC2.97□□□□□ -1.93
SHFQ7M4L6 AC022336.2-201ENST00000568966 2538 ntBASIC2.97□□□□□ -1.93
SHFQ7M4L6 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.97□□□□□ -1.93
SHFQ7M4L6 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
SHFQ7M4L6 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SHFQ7M4L6 MTND5P7-201ENST00000413558 1798 ntBASIC2.97□□□□□ -1.93
SHFQ7M4L6 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SHFQ7M4L6 RNA5SP119-201ENST00000362715 117 ntBASIC2.96□□□□□ -1.94
SHFQ7M4L6 SNORD81.2-201ENST00000365153 76 ntBASIC2.96□□□□□ -1.94
SHFQ7M4L6 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
SHFQ7M4L6 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
SHFQ7M4L6 RNU6-1009P-201ENST00000390996 107 ntBASIC2.96□□□□□ -1.94
SHFQ7M4L6 SNORA40C-201ENST00000391285 128 ntBASIC2.96□□□□□ -1.94
SHFQ7M4L6 EIF4E2P1-201ENST00000393781 255 ntBASIC2.96□□□□□ -1.94
SHFQ7M4L6 MTND3P8-201ENST00000412909 339 ntBASIC2.96□□□□□ -1.94
SHFQ7M4L6 AL592148.1-201ENST00000413568 445 ntBASIC2.96□□□□□ -1.94
SHFQ7M4L6 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.96□□□□□ -1.94
SHFQ7M4L6 HSPE1P1-201ENST00000421494 318 ntBASIC2.96□□□□□ -1.94
SHFQ7M4L6 AL353705.1-201ENST00000433468 480 ntBASIC2.96□□□□□ -1.94
SHFQ7M4L6 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.96□□□□□ -1.94
SHFQ7M4L6 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.96□□□□□ -1.94
SHFQ7M4L6 RNU6-329P-201ENST00000459618 107 ntBASIC2.96□□□□□ -1.94
SHFQ7M4L6 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.96□□□□□ -1.94
SHFQ7M4L6 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.96□□□□□ -1.94
SHFQ7M4L6 RNA5SP217-201ENST00000515959 91 ntBASIC2.96□□□□□ -1.94
SHFQ7M4L6 SNORA19.2-201ENST00000516013 114 ntBASIC2.96□□□□□ -1.94
SHFQ7M4L6 RNU1-95P-201ENST00000516357 160 ntBASIC2.96□□□□□ -1.94
SHFQ7M4L6 RNU1-128P-201ENST00000516704 160 ntBASIC2.96□□□□□ -1.94
SHFQ7M4L6 SNORA25.17-201ENST00000517184 124 ntBASIC2.96□□□□□ -1.94
SHFQ7M4L6 RN7SKP256-201ENST00000517201 314 ntBASIC2.96□□□□□ -1.94
SHFQ7M4L6 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.96□□□□□ -1.94
SHFQ7M4L6 HIGD1AP1-201ENST00000550979 275 ntBASIC2.96□□□□□ -1.94
SHFQ7M4L6 HMGB1P14-201ENST00000557424 591 ntBASIC2.96□□□□□ -1.94
SHFQ7M4L6 AC002044.1-201ENST00000606707 158 ntBASIC2.96□□□□□ -1.94
SHFQ7M4L6 AL357078.3-201ENST00000607528 618 ntBASIC2.96□□□□□ -1.94
SHFQ7M4L6 uc_338.1-201ENST00000612113 180 ntBASIC2.96□□□□□ -1.94
SHFQ7M4L6 MIR6076-201ENST00000617521 113 ntBASIC2.96□□□□□ -1.94
SHFQ7M4L6 AF117829.1-206ENST00000621883 3802 ntBASIC2.96□□□□□ -1.94
SHFQ7M4L6 AL031601.2-202ENST00000622650 282 ntBASIC2.96□□□□□ -1.94
SHFQ7M4L6 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.96□□□□□ -1.94
SHFQ7M4L6 AC091903.1-201ENST00000624322 454 ntBASIC2.96□□□□□ -1.94
SHFQ7M4L6 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
SHFQ7M4L6 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.96□□□□□ -1.94
SHFQ7M4L6 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms