Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 RNU6-338P-201ENST00000383888 105 ntBASIC4.14□□□□□ -1.75
RNF111Q6ZNA4 SNORA56-201ENST00000383966 129 ntBASIC4.14□□□□□ -1.75
RNF111Q6ZNA4 MIR215-201ENST00000384858 110 ntBASIC4.14□□□□□ -1.75
RNF111Q6ZNA4 MIR548H3-201ENST00000408771 118 ntBASIC4.14□□□□□ -1.75
RNF111Q6ZNA4 RNU6-1203P-201ENST00000410703 110 ntBASIC4.14□□□□□ -1.75
RNF111Q6ZNA4 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.14□□□□□ -1.75
RNF111Q6ZNA4 AL627311.1-201ENST00000431514 115 ntBASIC4.14□□□□□ -1.75
RNF111Q6ZNA4 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.14□□□□□ -1.75
RNF111Q6ZNA4 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.14□□□□□ -1.75
RNF111Q6ZNA4 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.14□□□□□ -1.75
RNF111Q6ZNA4 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.14□□□□□ -1.75
RNF111Q6ZNA4 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.14□□□□□ -1.75
RNF111Q6ZNA4 RPS20P22-201ENST00000473700 357 ntBASIC4.14□□□□□ -1.75
RNF111Q6ZNA4 RPL21P13-201ENST00000488305 481 ntBASIC4.14□□□□□ -1.75
RNF111Q6ZNA4 AC139453.3-201ENST00000493276 369 ntBASIC4.14□□□□□ -1.75
RNF111Q6ZNA4 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
RNF111Q6ZNA4 RN7SKP40-201ENST00000517211 242 ntBASIC4.14□□□□□ -1.75
RNF111Q6ZNA4 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.14□□□□□ -1.75
RNF111Q6ZNA4 AL590705.4-201ENST00000532209 134 ntBASIC4.14□□□□□ -1.75
RNF111Q6ZNA4 RRN3P3-201ENST00000549207 578 ntBASIC4.14□□□□□ -1.75
RNF111Q6ZNA4 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.14□□□□□ -1.75
RNF111Q6ZNA4 SRGNP1-201ENST00000603392 451 ntBASIC4.14□□□□□ -1.75
RNF111Q6ZNA4 AC090617.7-201ENST00000623952 126 ntBASIC4.14□□□□□ -1.75
RNF111Q6ZNA4 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.14□□□□□ -1.75
RNF111Q6ZNA4 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
RNF111Q6ZNA4 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
RNF111Q6ZNA4 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RNF111Q6ZNA4 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
RNF111Q6ZNA4 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RNF111Q6ZNA4 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RNF111Q6ZNA4 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
RNF111Q6ZNA4 Y_RNA.20-201ENST00000362479 113 ntBASIC4.13□□□□□ -1.75
RNF111Q6ZNA4 Y_RNA.27-201ENST00000362540 103 ntBASIC4.13□□□□□ -1.75
RNF111Q6ZNA4 RNA5SP443-201ENST00000363083 132 ntBASIC4.13□□□□□ -1.75
RNF111Q6ZNA4 RNA5SP447-201ENST00000363749 119 ntBASIC4.13□□□□□ -1.75
RNF111Q6ZNA4 Y_RNA.237-201ENST00000364439 102 ntBASIC4.13□□□□□ -1.75
RNF111Q6ZNA4 Y_RNA.358-201ENST00000365491 99 ntBASIC4.13□□□□□ -1.75
RNF111Q6ZNA4 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
RNF111Q6ZNA4 Y_RNA.458-201ENST00000384240 102 ntBASIC4.13□□□□□ -1.75
RNF111Q6ZNA4 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.13□□□□□ -1.75
RNF111Q6ZNA4 RPS20P14-201ENST00000412545 360 ntBASIC4.13□□□□□ -1.75
RNF111Q6ZNA4 TMSB10P2-201ENST00000416049 131 ntBASIC4.13□□□□□ -1.75
RNF111Q6ZNA4 TOMM22P1-201ENST00000418578 312 ntBASIC4.13□□□□□ -1.75
RNF111Q6ZNA4 PIGPP3-201ENST00000425307 415 ntBASIC4.13□□□□□ -1.75
RNF111Q6ZNA4 AC007560.1-201ENST00000426912 237 ntBASIC4.13□□□□□ -1.75
RNF111Q6ZNA4 AC011742.1-201ENST00000431448 434 ntBASIC4.13□□□□□ -1.75
RNF111Q6ZNA4 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.13□□□□□ -1.75
RNF111Q6ZNA4 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RNF111Q6ZNA4 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.13□□□□□ -1.75
RNF111Q6ZNA4 AC079354.2-201ENST00000453523 154 ntBASIC4.13□□□□□ -1.75
RNF111Q6ZNA4 AL139109.1-201ENST00000455491 297 ntBASIC4.13□□□□□ -1.75
RNF111Q6ZNA4 RNU7-87P-201ENST00000459343 62 ntBASIC4.13□□□□□ -1.75
RNF111Q6ZNA4 AC006517.1-201ENST00000480485 328 ntBASIC4.13□□□□□ -1.75
RNF111Q6ZNA4 AC010469.2-201ENST00000496412 480 ntBASIC4.13□□□□□ -1.75
RNF111Q6ZNA4 SNORA31.19-201ENST00000517079 126 ntBASIC4.13□□□□□ -1.75
RNF111Q6ZNA4 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC4.13□□□□□ -1.75
RNF111Q6ZNA4 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC4.13□□□□□ -1.75
RNF111Q6ZNA4 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.13□□□□□ -1.75
RNF111Q6ZNA4 MED28P6-201ENST00000558776 231 ntBASIC4.13□□□□□ -1.75
RNF111Q6ZNA4 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.13□□□□□ -1.75
RNF111Q6ZNA4 HNRNPCP4-201ENST00000571636 900 ntBASIC4.13□□□□□ -1.75
RNF111Q6ZNA4 MIR5096-201ENST00000583713 70 ntBASIC4.13□□□□□ -1.75
RNF111Q6ZNA4 AC020914.4-201ENST00000597690 277 ntBASIC4.13□□□□□ -1.75
RNF111Q6ZNA4 AC008745.1-201ENST00000604064 271 ntBASIC4.13□□□□□ -1.75
RNF111Q6ZNA4 AC006077.1-201ENST00000604746 343 ntBASIC4.13□□□□□ -1.75
RNF111Q6ZNA4 RNA5SP108-201ENST00000605921 117 ntBASIC4.13□□□□□ -1.75
RNF111Q6ZNA4 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
RNF111Q6ZNA4 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.13□□□□□ -1.75
RNF111Q6ZNA4 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.13□□□□□ -1.75
RNF111Q6ZNA4 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RNF111Q6ZNA4 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RNF111Q6ZNA4 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.12□□□□□ -1.75
RNF111Q6ZNA4 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
RNF111Q6ZNA4 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
RNF111Q6ZNA4 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RNF111Q6ZNA4 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
RNF111Q6ZNA4 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RNF111Q6ZNA4 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RNF111Q6ZNA4 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.12□□□□□ -1.75
RNF111Q6ZNA4 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RNF111Q6ZNA4 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RNF111Q6ZNA4 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
RNF111Q6ZNA4 Y_RNA.539-201ENST00000384635 107 ntBASIC4.12□□□□□ -1.75
RNF111Q6ZNA4 MIR190B-201ENST00000401119 79 ntBASIC4.12□□□□□ -1.75
RNF111Q6ZNA4 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.12□□□□□ -1.75
RNF111Q6ZNA4 CYP4F29P-201ENST00000420685 446 ntBASIC4.12□□□□□ -1.75
RNF111Q6ZNA4 AC096920.1-201ENST00000423991 241 ntBASIC4.12□□□□□ -1.75
RNF111Q6ZNA4 SDAD1P3-201ENST00000427380 333 ntBASIC4.12□□□□□ -1.75
RNF111Q6ZNA4 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.12□□□□□ -1.75
RNF111Q6ZNA4 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.12□□□□□ -1.75
RNF111Q6ZNA4 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.12□□□□□ -1.75
RNF111Q6ZNA4 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.12□□□□□ -1.75
RNF111Q6ZNA4 RN7SL812P-201ENST00000493791 279 ntBASIC4.12□□□□□ -1.75
RNF111Q6ZNA4 AC067942.3-201ENST00000512025 362 ntBASIC4.12□□□□□ -1.75
RNF111Q6ZNA4 IGKV2-23-201ENST00000518729 323 ntBASIC4.12□□□□□ -1.75
RNF111Q6ZNA4 RAB9BP1-201ENST00000519581 626 ntBASIC4.12□□□□□ -1.75
RNF111Q6ZNA4 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.12□□□□□ -1.75
RNF111Q6ZNA4 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.12□□□□□ -1.75
RNF111Q6ZNA4 AC004024.1-201ENST00000549244 247 ntBASIC4.12□□□□□ -1.75
RNF111Q6ZNA4 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms