Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.1□□□□□ -1.91
TMEM88Q6PEY1 PARP1P2-201ENST00000556806 195 ntBASIC3.1□□□□□ -1.91
TMEM88Q6PEY1 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.1□□□□□ -1.91
TMEM88Q6PEY1 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.1□□□□□ -1.91
TMEM88Q6PEY1 AC113403.1-201ENST00000604910 193 ntBASIC3.1□□□□□ -1.91
TMEM88Q6PEY1 AL121917.1-203ENST00000605534 577 ntBASIC3.1□□□□□ -1.91
TMEM88Q6PEY1 AC009233.1-201ENST00000616477 371 ntBASIC3.1□□□□□ -1.91
TMEM88Q6PEY1 Z69720.2-201ENST00000624755 279 ntBASIC3.1□□□□□ -1.91
TMEM88Q6PEY1 SNORA50A-202ENST00000629536 136 ntBASIC3.1□□□□□ -1.91
TMEM88Q6PEY1 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TMEM88Q6PEY1 ADAM3A-203ENST00000461344 2157 ntBASIC3.1□□□□□ -1.91
TMEM88Q6PEY1 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
TMEM88Q6PEY1 AC073544.1-201ENST00000600110 1595 ntBASIC3.09□□□□□ -1.91
TMEM88Q6PEY1 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.09□□□□□ -1.91
TMEM88Q6PEY1 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
TMEM88Q6PEY1 MIR331-201ENST00000362302 94 ntBASIC3.09□□□□□ -1.91
TMEM88Q6PEY1 Y_RNA.67-201ENST00000362870 100 ntBASIC3.09□□□□□ -1.91
TMEM88Q6PEY1 Y_RNA.135-201ENST00000363439 95 ntBASIC3.09□□□□□ -1.91
TMEM88Q6PEY1 SNORA70.2-201ENST00000364506 135 ntBASIC3.09□□□□□ -1.91
TMEM88Q6PEY1 RNU6-128P-201ENST00000383976 107 ntBASIC3.09□□□□□ -1.91
TMEM88Q6PEY1 RNU6-72P-201ENST00000384285 79 ntBASIC3.09□□□□□ -1.91
TMEM88Q6PEY1 Y_RNA.474-201ENST00000384341 102 ntBASIC3.09□□□□□ -1.91
TMEM88Q6PEY1 MIR518D-201ENST00000385014 87 ntBASIC3.09□□□□□ -1.91
TMEM88Q6PEY1 RNU4-14P-201ENST00000410858 122 ntBASIC3.09□□□□□ -1.91
TMEM88Q6PEY1 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.09□□□□□ -1.91
TMEM88Q6PEY1 AL096701.2-201ENST00000416920 238 ntBASIC3.09□□□□□ -1.91
TMEM88Q6PEY1 AC091390.1-201ENST00000433904 331 ntBASIC3.09□□□□□ -1.91
TMEM88Q6PEY1 GOT2P5-201ENST00000433995 546 ntBASIC3.09□□□□□ -1.91
TMEM88Q6PEY1 BX679664.1-201ENST00000434429 253 ntBASIC3.09□□□□□ -1.91
TMEM88Q6PEY1 RPS3AP52-201ENST00000435639 297 ntBASIC3.09□□□□□ -1.91
TMEM88Q6PEY1 AL714022.1-201ENST00000439897 151 ntBASIC3.09□□□□□ -1.91
TMEM88Q6PEY1 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.09□□□□□ -1.91
TMEM88Q6PEY1 AC107399.1-201ENST00000451226 265 ntBASIC3.09□□□□□ -1.91
TMEM88Q6PEY1 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.09□□□□□ -1.91
TMEM88Q6PEY1 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.09□□□□□ -1.91
TMEM88Q6PEY1 AC130509.1-201ENST00000464158 433 ntBASIC3.09□□□□□ -1.91
TMEM88Q6PEY1 RPL23AP45-201ENST00000476406 468 ntBASIC3.09□□□□□ -1.91
TMEM88Q6PEY1 RPS27P27-201ENST00000498779 255 ntBASIC3.09□□□□□ -1.91
TMEM88Q6PEY1 MTND5P5-201ENST00000503764 376 ntBASIC3.09□□□□□ -1.91
TMEM88Q6PEY1 MTND4LP22-201ENST00000508209 276 ntBASIC3.09□□□□□ -1.91
TMEM88Q6PEY1 FGF7P4-201ENST00000509595 295 ntBASIC3.09□□□□□ -1.91
TMEM88Q6PEY1 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.09□□□□□ -1.91
TMEM88Q6PEY1 RN7SKP122-201ENST00000515923 296 ntBASIC3.09□□□□□ -1.91
TMEM88Q6PEY1 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.09□□□□□ -1.91
TMEM88Q6PEY1 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.09□□□□□ -1.91
TMEM88Q6PEY1 AL354984.3-201ENST00000604803 325 ntBASIC3.09□□□□□ -1.91
TMEM88Q6PEY1 AL161629.2-201ENST00000615347 275 ntBASIC3.09□□□□□ -1.91
TMEM88Q6PEY1 uc_338.13-201ENST00000618243 179 ntBASIC3.09□□□□□ -1.91
TMEM88Q6PEY1 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.09□□□□□ -1.91
TMEM88Q6PEY1 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.09□□□□□ -1.91
TMEM88Q6PEY1 AC138627.2-201ENST00000624202 601 ntBASIC3.09□□□□□ -1.91
TMEM88Q6PEY1 MTND5P27-201ENST00000428871 1720 ntBASIC3.09□□□□□ -1.91
TMEM88Q6PEY1 AL079305.1-201ENST00000623159 3008 ntBASIC3.09□□□□□ -1.91
TMEM88Q6PEY1 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.92
TMEM88Q6PEY1 AC233263.6-201ENST00000631132 1963 ntBASIC3.09□□□□□ -1.92
TMEM88Q6PEY1 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.09□□□□□ -1.92
TMEM88Q6PEY1 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TMEM88Q6PEY1 SNORA14A-201ENST00000364773 135 ntBASIC3.08□□□□□ -1.92
TMEM88Q6PEY1 Y_RNA.339-201ENST00000365325 102 ntBASIC3.08□□□□□ -1.92
TMEM88Q6PEY1 RNU6-827P-201ENST00000365553 106 ntBASIC3.08□□□□□ -1.92
TMEM88Q6PEY1 RNU6-1329P-201ENST00000365664 107 ntBASIC3.08□□□□□ -1.92
TMEM88Q6PEY1 RNU6-95P-201ENST00000384697 107 ntBASIC3.08□□□□□ -1.92
TMEM88Q6PEY1 MIR3065-201ENST00000390137 79 ntBASIC3.08□□□□□ -1.92
TMEM88Q6PEY1 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
TMEM88Q6PEY1 SAR1AP2-201ENST00000392696 594 ntBASIC3.08□□□□□ -1.92
TMEM88Q6PEY1 MIR548K-201ENST00000408406 116 ntBASIC3.08□□□□□ -1.92
TMEM88Q6PEY1 U3.37-201ENST00000408528 213 ntBASIC3.08□□□□□ -1.92
TMEM88Q6PEY1 RNU6-55P-201ENST00000411092 107 ntBASIC3.08□□□□□ -1.92
TMEM88Q6PEY1 RNU6-954P-201ENST00000411355 107 ntBASIC3.08□□□□□ -1.92
TMEM88Q6PEY1 SNORD56-201ENST00000413522 71 ntBASIC3.08□□□□□ -1.92
TMEM88Q6PEY1 AC074085.1-201ENST00000413598 418 ntBASIC3.08□□□□□ -1.92
TMEM88Q6PEY1 AL139396.1-201ENST00000421137 167 ntBASIC3.08□□□□□ -1.92
TMEM88Q6PEY1 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.08□□□□□ -1.92
TMEM88Q6PEY1 AL132765.1-201ENST00000434165 553 ntBASIC3.08□□□□□ -1.92
TMEM88Q6PEY1 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.08□□□□□ -1.92
TMEM88Q6PEY1 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.08□□□□□ -1.92
TMEM88Q6PEY1 AC006483.1-201ENST00000487308 313 ntBASIC3.08□□□□□ -1.92
TMEM88Q6PEY1 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.08□□□□□ -1.92
TMEM88Q6PEY1 RPL39P5-202ENST00000512505 151 ntBASIC3.08□□□□□ -1.92
TMEM88Q6PEY1 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.08□□□□□ -1.92
TMEM88Q6PEY1 RNU7-143P-201ENST00000516781 65 ntBASIC3.08□□□□□ -1.92
TMEM88Q6PEY1 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.08□□□□□ -1.92
TMEM88Q6PEY1 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.08□□□□□ -1.92
TMEM88Q6PEY1 TGIF1P1-201ENST00000558095 802 ntBASIC3.08□□□□□ -1.92
TMEM88Q6PEY1 AC007151.1-201ENST00000572774 483 ntBASIC3.08□□□□□ -1.92
TMEM88Q6PEY1 MIR3939-201ENST00000582614 106 ntBASIC3.08□□□□□ -1.92
TMEM88Q6PEY1 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.08□□□□□ -1.92
TMEM88Q6PEY1 POLR3GP2-201ENST00000588366 668 ntBASIC3.08□□□□□ -1.92
TMEM88Q6PEY1 AC016727.1-205ENST00000605437 569 ntBASIC3.08□□□□□ -1.92
TMEM88Q6PEY1 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TMEM88Q6PEY1 AC114781.5-201ENST00000615297 108 ntBASIC3.08□□□□□ -1.92
TMEM88Q6PEY1 AL359757.2-201ENST00000624309 274 ntBASIC3.08□□□□□ -1.92
TMEM88Q6PEY1 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.08□□□□□ -1.92
TMEM88Q6PEY1 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
TMEM88Q6PEY1 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
TMEM88Q6PEY1 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
TMEM88Q6PEY1 AC007496.3-201ENST00000624987 3443 ntBASIC3.08□□□□□ -1.92
TMEM88Q6PEY1 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.08□□□□□ -1.92
TMEM88Q6PEY1 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
TMEM88Q6PEY1 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms