Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AL670379.8-201ENST00000605353 252 ntBASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 AL670379.7-201ENST00000605823 252 ntBASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 AC012409.4-201ENST00000612923 249 ntBASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 AL138726.1-201ENST00000614873 333 ntBASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 AL450472.3-201ENST00000615578 367 ntBASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 U73479.1-201ENST00000618062 168 ntBASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 AC008121.3-201ENST00000618726 433 ntBASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ZNF549Q6P9A3 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.22□□□□□ -1.89
ZNF549Q6P9A3 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
ZNF549Q6P9A3 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
ZNF549Q6P9A3 Y_RNA.145-201ENST00000363527 102 ntBASIC3.22□□□□□ -1.89
ZNF549Q6P9A3 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
ZNF549Q6P9A3 SNORD116-11-201ENST00000383882 92 ntBASIC3.22□□□□□ -1.89
ZNF549Q6P9A3 RNU6-701P-201ENST00000384059 107 ntBASIC3.22□□□□□ -1.89
ZNF549Q6P9A3 RNU4-78P-201ENST00000410940 126 ntBASIC3.22□□□□□ -1.89
ZNF549Q6P9A3 AC063979.1-201ENST00000415539 377 ntBASIC3.22□□□□□ -1.89
ZNF549Q6P9A3 SSXP9-201ENST00000417503 292 ntBASIC3.22□□□□□ -1.89
ZNF549Q6P9A3 AL451062.2-201ENST00000427515 271 ntBASIC3.22□□□□□ -1.89
ZNF549Q6P9A3 AL669831.1-202ENST00000428504 417 ntBASIC3.22□□□□□ -1.89
ZNF549Q6P9A3 AL159987.2-201ENST00000432754 307 ntBASIC3.22□□□□□ -1.89
ZNF549Q6P9A3 AC090774.1-201ENST00000435925 246 ntBASIC3.22□□□□□ -1.89
ZNF549Q6P9A3 RPL23AP22-201ENST00000437556 453 ntBASIC3.22□□□□□ -1.89
ZNF549Q6P9A3 CYCSP43-201ENST00000438233 310 ntBASIC3.22□□□□□ -1.89
ZNF549Q6P9A3 MTND3P2-201ENST00000438452 342 ntBASIC3.22□□□□□ -1.89
ZNF549Q6P9A3 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.22□□□□□ -1.89
ZNF549Q6P9A3 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.22□□□□□ -1.89
ZNF549Q6P9A3 AC115115.1-201ENST00000449927 248 ntBASIC3.22□□□□□ -1.89
ZNF549Q6P9A3 MTCO3P10-201ENST00000455912 772 ntBASIC3.22□□□□□ -1.89
ZNF549Q6P9A3 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.22□□□□□ -1.89
ZNF549Q6P9A3 NDUFB4P9-201ENST00000511646 388 ntBASIC3.22□□□□□ -1.89
ZNF549Q6P9A3 RNU6-123P-201ENST00000516163 102 ntBASIC3.22□□□□□ -1.89
ZNF549Q6P9A3 RNU6-1046P-201ENST00000516538 107 ntBASIC3.22□□□□□ -1.89
ZNF549Q6P9A3 AC103783.1-201ENST00000520506 373 ntBASIC3.22□□□□□ -1.89
ZNF549Q6P9A3 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.22□□□□□ -1.89
ZNF549Q6P9A3 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.22□□□□□ -1.89
ZNF549Q6P9A3 DNAJC8P1-201ENST00000554535 372 ntBASIC3.22□□□□□ -1.89
ZNF549Q6P9A3 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.22□□□□□ -1.89
ZNF549Q6P9A3 AC136443.5-201ENST00000603741 370 ntBASIC3.22□□□□□ -1.89
ZNF549Q6P9A3 AC007619.2-201ENST00000605743 379 ntBASIC3.22□□□□□ -1.89
ZNF549Q6P9A3 AC019193.3-201ENST00000609144 554 ntBASIC3.22□□□□□ -1.89
ZNF549Q6P9A3 AC009570.1-201ENST00000609599 745 ntBASIC3.22□□□□□ -1.89
ZNF549Q6P9A3 AL713922.2-201ENST00000619384 716 ntBASIC3.22□□□□□ -1.89
ZNF549Q6P9A3 AL589994.2-201ENST00000621124 579 ntBASIC3.22□□□□□ -1.89
ZNF549Q6P9A3 MTND5P42-201ENST00000637720 498 ntBASIC3.22□□□□□ -1.89
ZNF549Q6P9A3 DDX10P1-201ENST00000448545 1933 ntBASIC3.22□□□□□ -1.89
ZNF549Q6P9A3 ZNF519P1-201ENST00000449011 1626 ntBASIC3.22□□□□□ -1.89
ZNF549Q6P9A3 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.22□□□□□ -1.89
ZNF549Q6P9A3 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.21□□□□□ -1.89
ZNF549Q6P9A3 HSPA8P4-201ENST00000511877 1920 ntBASIC3.21□□□□□ -1.9
ZNF549Q6P9A3 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
ZNF549Q6P9A3 Y_RNA.399-201ENST00000383955 105 ntBASIC3.21□□□□□ -1.9
ZNF549Q6P9A3 MIR7-3-201ENST00000384898 110 ntBASIC3.21□□□□□ -1.9
ZNF549Q6P9A3 RNA5SP219-201ENST00000390940 113 ntBASIC3.21□□□□□ -1.9
ZNF549Q6P9A3 RNU6-308P-201ENST00000390957 107 ntBASIC3.21□□□□□ -1.9
ZNF549Q6P9A3 AL360182.1-201ENST00000397433 468 ntBASIC3.21□□□□□ -1.9
ZNF549Q6P9A3 AC110754.1-201ENST00000399740 601 ntBASIC3.21□□□□□ -1.9
ZNF549Q6P9A3 NDUFS5P1-201ENST00000405668 289 ntBASIC3.21□□□□□ -1.9
ZNF549Q6P9A3 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
ZNF549Q6P9A3 RNA5SP44-201ENST00000410446 133 ntBASIC3.21□□□□□ -1.9
ZNF549Q6P9A3 RNU6-712P-201ENST00000410558 100 ntBASIC3.21□□□□□ -1.9
ZNF549Q6P9A3 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.21□□□□□ -1.9
ZNF549Q6P9A3 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.21□□□□□ -1.9
ZNF549Q6P9A3 PPP1R11P2-201ENST00000423543 382 ntBASIC3.21□□□□□ -1.9
ZNF549Q6P9A3 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.21□□□□□ -1.9
ZNF549Q6P9A3 HMGB3P8-201ENST00000449709 577 ntBASIC3.21□□□□□ -1.9
ZNF549Q6P9A3 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.21□□□□□ -1.9
ZNF549Q6P9A3 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.21□□□□□ -1.9
ZNF549Q6P9A3 RPS27P29-201ENST00000463110 252 ntBASIC3.21□□□□□ -1.9
ZNF549Q6P9A3 HIGD1AP13-201ENST00000509878 289 ntBASIC3.21□□□□□ -1.9
ZNF549Q6P9A3 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.21□□□□□ -1.9
ZNF549Q6P9A3 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.21□□□□□ -1.9
ZNF549Q6P9A3 HMGN1P28-201ENST00000521340 364 ntBASIC3.21□□□□□ -1.9
ZNF549Q6P9A3 SNRPGP18-201ENST00000553000 214 ntBASIC3.21□□□□□ -1.9
ZNF549Q6P9A3 AC138761.3-201ENST00000579993 334 ntBASIC3.21□□□□□ -1.9
ZNF549Q6P9A3 MIR2682-201ENST00000580305 110 ntBASIC3.21□□□□□ -1.9
ZNF549Q6P9A3 MIR3671-201ENST00000580455 88 ntBASIC3.21□□□□□ -1.9
ZNF549Q6P9A3 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.21□□□□□ -1.9
ZNF549Q6P9A3 IGHV3-29-201ENST00000604817 344 ntBASIC3.21□□□□□ -1.9
ZNF549Q6P9A3 AC016925.2-201ENST00000605108 242 ntBASIC3.21□□□□□ -1.9
ZNF549Q6P9A3 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.21□□□□□ -1.9
ZNF549Q6P9A3 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.21□□□□□ -1.9
ZNF549Q6P9A3 AL353748.2-201ENST00000622148 471 ntBASIC3.21□□□□□ -1.9
ZNF549Q6P9A3 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.21□□□□□ -1.9
ZNF549Q6P9A3 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.21□□□□□ -1.9
ZNF549Q6P9A3 Z83843.1-201ENST00000604070 3685 ntBASIC3.21□□□□□ -1.9
ZNF549Q6P9A3 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
ZNF549Q6P9A3 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
ZNF549Q6P9A3 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
ZNF549Q6P9A3 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
ZNF549Q6P9A3 SRP72P2-201ENST00000344851 1979 ntBASIC3.2□□□□□ -1.9
ZNF549Q6P9A3 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.2□□□□□ -1.9
ZNF549Q6P9A3 Y_RNA.112-201ENST00000363250 102 ntBASIC3.2□□□□□ -1.9
ZNF549Q6P9A3 Y_RNA.133-201ENST00000363428 110 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms