Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AL137847.3-201ENST00000611521 109 ntBASIC2.26□□□□□ -2.05
NIPAL3Q6P499 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.26□□□□□ -2.05
NIPAL3Q6P499 AC024940.5-201ENST00000622889 474 ntBASIC2.26□□□□□ -2.05
NIPAL3Q6P499 AC079248.2-201ENST00000623779 326 ntBASIC2.26□□□□□ -2.05
NIPAL3Q6P499 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.26□□□□□ -2.05
NIPAL3Q6P499 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.26□□□□□ -2.05
NIPAL3Q6P499 Z75746.1-201ENST00000440243 2080 ntBASIC2.26□□□□□ -2.05
NIPAL3Q6P499 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
NIPAL3Q6P499 RNU5E-1-201ENST00000362477 120 ntBASIC2.25□□□□□ -2.05
NIPAL3Q6P499 RNA5SP125-201ENST00000364843 120 ntBASIC2.25□□□□□ -2.05
NIPAL3Q6P499 RNU1-52P-201ENST00000384190 164 ntBASIC2.25□□□□□ -2.05
NIPAL3Q6P499 Y_RNA.598-201ENST00000410480 95 ntBASIC2.25□□□□□ -2.05
NIPAL3Q6P499 RNU2-8P-201ENST00000410727 190 ntBASIC2.25□□□□□ -2.05
NIPAL3Q6P499 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.25□□□□□ -2.05
NIPAL3Q6P499 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC2.25□□□□□ -2.05
NIPAL3Q6P499 RPS3AP44-201ENST00000425466 790 ntBASIC2.25□□□□□ -2.05
NIPAL3Q6P499 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.25□□□□□ -2.05
NIPAL3Q6P499 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.25□□□□□ -2.05
NIPAL3Q6P499 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.25□□□□□ -2.05
NIPAL3Q6P499 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.25□□□□□ -2.05
NIPAL3Q6P499 RPS24P1-201ENST00000438550 371 ntBASIC2.25□□□□□ -2.05
NIPAL3Q6P499 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.25□□□□□ -2.05
NIPAL3Q6P499 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.25□□□□□ -2.05
NIPAL3Q6P499 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.25□□□□□ -2.05
NIPAL3Q6P499 AL139109.1-201ENST00000455491 297 ntBASIC2.25□□□□□ -2.05
NIPAL3Q6P499 DYNLL1P5-201ENST00000467158 270 ntBASIC2.25□□□□□ -2.05
NIPAL3Q6P499 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.25□□□□□ -2.05
NIPAL3Q6P499 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.25□□□□□ -2.05
NIPAL3Q6P499 MTND1P22-201ENST00000510572 951 ntBASIC2.25□□□□□ -2.05
NIPAL3Q6P499 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.25□□□□□ -2.05
NIPAL3Q6P499 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.25□□□□□ -2.05
NIPAL3Q6P499 SNORA25.11-201ENST00000515935 105 ntBASIC2.25□□□□□ -2.05
NIPAL3Q6P499 Y_RNA.672-201ENST00000516289 104 ntBASIC2.25□□□□□ -2.05
NIPAL3Q6P499 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.25□□□□□ -2.05
NIPAL3Q6P499 AP003467.2-201ENST00000520175 319 ntBASIC2.25□□□□□ -2.05
NIPAL3Q6P499 AC012213.3-201ENST00000577199 777 ntBASIC2.25□□□□□ -2.05
NIPAL3Q6P499 WISP1-OT1-201ENST00000602893 642 ntBASIC2.25□□□□□ -2.05
NIPAL3Q6P499 AC092354.1-201ENST00000606057 376 ntBASIC2.25□□□□□ -2.05
NIPAL3Q6P499 AC122133.1-201ENST00000613964 233 ntBASIC2.25□□□□□ -2.05
NIPAL3Q6P499 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.25□□□□□ -2.05
NIPAL3Q6P499 AF246928.1-201ENST00000623768 87 ntBASIC2.25□□□□□ -2.05
NIPAL3Q6P499 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
NIPAL3Q6P499 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.25□□□□□ -2.05
NIPAL3Q6P499 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.25□□□□□ -2.05
NIPAL3Q6P499 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
NIPAL3Q6P499 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.24□□□□□ -2.05
NIPAL3Q6P499 ZNF271P-202ENST00000465539 1970 ntBASIC2.24□□□□□ -2.05
NIPAL3Q6P499 RNY1P12-201ENST00000364251 105 ntBASIC2.24□□□□□ -2.05
NIPAL3Q6P499 SNORA67.1-201ENST00000364749 141 ntBASIC2.24□□□□□ -2.05
NIPAL3Q6P499 RNU5A-2P-201ENST00000384337 116 ntBASIC2.24□□□□□ -2.05
NIPAL3Q6P499 RNU6-39P-201ENST00000384344 107 ntBASIC2.24□□□□□ -2.05
NIPAL3Q6P499 MIR518D-201ENST00000385014 87 ntBASIC2.24□□□□□ -2.05
NIPAL3Q6P499 AL031577.2-201ENST00000404133 280 ntBASIC2.24□□□□□ -2.05
NIPAL3Q6P499 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
NIPAL3Q6P499 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.24□□□□□ -2.05
NIPAL3Q6P499 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.24□□□□□ -2.05
NIPAL3Q6P499 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.24□□□□□ -2.05
NIPAL3Q6P499 AC097463.2-201ENST00000421074 142 ntBASIC2.24□□□□□ -2.05
NIPAL3Q6P499 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.24□□□□□ -2.05
NIPAL3Q6P499 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.24□□□□□ -2.05
NIPAL3Q6P499 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.24□□□□□ -2.05
NIPAL3Q6P499 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC2.24□□□□□ -2.05
NIPAL3Q6P499 RPL7P12-201ENST00000446719 750 ntBASIC2.24□□□□□ -2.05
NIPAL3Q6P499 AC009961.3-201ENST00000449832 765 ntBASIC2.24□□□□□ -2.05
NIPAL3Q6P499 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.24□□□□□ -2.05
NIPAL3Q6P499 AC011005.2-201ENST00000487324 359 ntBASIC2.24□□□□□ -2.05
NIPAL3Q6P499 RPL37P25-201ENST00000507308 276 ntBASIC2.24□□□□□ -2.05
NIPAL3Q6P499 MTND4P2-201ENST00000507767 1203 ntBASIC2.24□□□□□ -2.05
NIPAL3Q6P499 SMURF2P1-201ENST00000514992 481 ntBASIC2.24□□□□□ -2.05
NIPAL3Q6P499 RNA5SP402-201ENST00000517148 110 ntBASIC2.24□□□□□ -2.05
NIPAL3Q6P499 AC106038.2-201ENST00000520706 568 ntBASIC2.24□□□□□ -2.05
NIPAL3Q6P499 AP005902.1-201ENST00000521358 186 ntBASIC2.24□□□□□ -2.05
NIPAL3Q6P499 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.24□□□□□ -2.05
NIPAL3Q6P499 ADI1P3-201ENST00000549509 470 ntBASIC2.24□□□□□ -2.05
NIPAL3Q6P499 RPL21P5-201ENST00000554662 472 ntBASIC2.24□□□□□ -2.05
NIPAL3Q6P499 MTATP6P24-201ENST00000576835 677 ntBASIC2.24□□□□□ -2.05
NIPAL3Q6P499 AL670379.10-201ENST00000604330 253 ntBASIC2.24□□□□□ -2.05
NIPAL3Q6P499 AL670379.9-201ENST00000605428 253 ntBASIC2.24□□□□□ -2.05
NIPAL3Q6P499 AC012360.2-201ENST00000609349 391 ntBASIC2.24□□□□□ -2.05
NIPAL3Q6P499 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.24□□□□□ -2.05
NIPAL3Q6P499 AC024581.2-201ENST00000619986 252 ntBASIC2.24□□□□□ -2.05
NIPAL3Q6P499 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
NIPAL3Q6P499 AC244517.12-201ENST00000623581 663 ntBASIC2.24□□□□□ -2.05
NIPAL3Q6P499 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.24□□□□□ -2.05
NIPAL3Q6P499 SCARNA15.3-201ENST00000626315 122 ntBASIC2.24□□□□□ -2.05
NIPAL3Q6P499 SCARNA4.1-201ENST00000628597 123 ntBASIC2.24□□□□□ -2.05
NIPAL3Q6P499 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
NIPAL3Q6P499 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
NIPAL3Q6P499 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.24□□□□□ -2.05
NIPAL3Q6P499 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
NIPAL3Q6P499 AC138393.1-203ENST00000327086 343 ntBASIC2.23□□□□□ -2.05
NIPAL3Q6P499 RNA5SP456-201ENST00000364002 114 ntBASIC2.23□□□□□ -2.05
NIPAL3Q6P499 RNU6-553P-201ENST00000364047 96 ntBASIC2.23□□□□□ -2.05
NIPAL3Q6P499 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
NIPAL3Q6P499 RNU6-641P-201ENST00000384006 107 ntBASIC2.23□□□□□ -2.05
NIPAL3Q6P499 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
NIPAL3Q6P499 RPL23AP32-201ENST00000395315 459 ntBASIC2.23□□□□□ -2.05
NIPAL3Q6P499 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.23□□□□□ -2.05
NIPAL3Q6P499 AC003685.2-201ENST00000422795 395 ntBASIC2.23□□□□□ -2.05
NIPAL3Q6P499 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms