Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 RNU6-512P-201ENST00000364438 103 ntBASIC2.31□□□□□ -2.04
ATL3Q6DD88 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
ATL3Q6DD88 AL021407.1-201ENST00000404531 386 ntBASIC2.31□□□□□ -2.04
ATL3Q6DD88 SUMO2P12-201ENST00000405924 140 ntBASIC2.31□□□□□ -2.04
ATL3Q6DD88 AL355497.1-201ENST00000406262 551 ntBASIC2.31□□□□□ -2.04
ATL3Q6DD88 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.31□□□□□ -2.04
ATL3Q6DD88 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.31□□□□□ -2.04
ATL3Q6DD88 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.31□□□□□ -2.04
ATL3Q6DD88 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.31□□□□□ -2.04
ATL3Q6DD88 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.31□□□□□ -2.04
ATL3Q6DD88 HMGB3P12-201ENST00000438745 556 ntBASIC2.31□□□□□ -2.04
ATL3Q6DD88 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.31□□□□□ -2.04
ATL3Q6DD88 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.31□□□□□ -2.04
ATL3Q6DD88 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.31□□□□□ -2.04
ATL3Q6DD88 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
ATL3Q6DD88 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.31□□□□□ -2.04
ATL3Q6DD88 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.31□□□□□ -2.04
ATL3Q6DD88 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.31□□□□□ -2.04
ATL3Q6DD88 AC135628.1-201ENST00000568867 534 ntBASIC2.31□□□□□ -2.04
ATL3Q6DD88 MIR5697-201ENST00000578045 78 ntBASIC2.31□□□□□ -2.04
ATL3Q6DD88 AC004223.4-201ENST00000612426 332 ntBASIC2.31□□□□□ -2.04
ATL3Q6DD88 uc_338.14-201ENST00000613162 166 ntBASIC2.31□□□□□ -2.04
ATL3Q6DD88 AC012640.5-201ENST00000623897 319 ntBASIC2.31□□□□□ -2.04
ATL3Q6DD88 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.31□□□□□ -2.04
ATL3Q6DD88 AC092104.1-201ENST00000497346 1441 ntBASIC2.31□□□□□ -2.04
ATL3Q6DD88 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
ATL3Q6DD88 AL596028.1-201ENST00000326971 197 ntBASIC2.3□□□□□ -2.04
ATL3Q6DD88 RNU4-1-201ENST00000363925 141 ntBASIC2.3□□□□□ -2.04
ATL3Q6DD88 RNU5E-6P-201ENST00000365574 115 ntBASIC2.3□□□□□ -2.04
ATL3Q6DD88 RNU6-809P-201ENST00000384461 107 ntBASIC2.3□□□□□ -2.04
ATL3Q6DD88 UBE2V1P2-201ENST00000397758 440 ntBASIC2.3□□□□□ -2.04
ATL3Q6DD88 RNU2-62P-201ENST00000410868 191 ntBASIC2.3□□□□□ -2.04
ATL3Q6DD88 RNU6-920P-201ENST00000410926 92 ntBASIC2.3□□□□□ -2.04
ATL3Q6DD88 GPM6BP2-201ENST00000432046 144 ntBASIC2.3□□□□□ -2.04
ATL3Q6DD88 GPM6BP1-201ENST00000446387 144 ntBASIC2.3□□□□□ -2.04
ATL3Q6DD88 EPS15P1-201ENST00000448836 336 ntBASIC2.3□□□□□ -2.04
ATL3Q6DD88 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.3□□□□□ -2.04
ATL3Q6DD88 AC080013.2-201ENST00000460866 323 ntBASIC2.3□□□□□ -2.04
ATL3Q6DD88 AC005178.1-201ENST00000508392 440 ntBASIC2.3□□□□□ -2.04
ATL3Q6DD88 AC023141.11-201ENST00000508864 202 ntBASIC2.3□□□□□ -2.04
ATL3Q6DD88 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.3□□□□□ -2.04
ATL3Q6DD88 AC022616.6-201ENST00000520479 119 ntBASIC2.3□□□□□ -2.04
ATL3Q6DD88 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.3□□□□□ -2.04
ATL3Q6DD88 AL512310.1-201ENST00000548639 172 ntBASIC2.3□□□□□ -2.04
ATL3Q6DD88 OR11H5P-201ENST00000554039 926 ntBASIC2.3□□□□□ -2.04
ATL3Q6DD88 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.3□□□□□ -2.04
ATL3Q6DD88 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
ATL3Q6DD88 AL353778.1-201ENST00000603149 408 ntBASIC2.3□□□□□ -2.04
ATL3Q6DD88 AC007363.1-201ENST00000604736 620 ntBASIC2.3□□□□□ -2.04
ATL3Q6DD88 AP000860.1-201ENST00000605250 559 ntBASIC2.3□□□□□ -2.04
ATL3Q6DD88 AC092140.2-201ENST00000618027 521 ntBASIC2.3□□□□□ -2.04
ATL3Q6DD88 MIR219B-201ENST00000637023 88 ntBASIC2.3□□□□□ -2.04
ATL3Q6DD88 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.3□□□□□ -2.04
ATL3Q6DD88 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
ATL3Q6DD88 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
ATL3Q6DD88 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
ATL3Q6DD88 RNU5F-6P-201ENST00000362979 116 ntBASIC2.29□□□□□ -2.04
ATL3Q6DD88 RNY4P16-201ENST00000364768 94 ntBASIC2.29□□□□□ -2.04
ATL3Q6DD88 RNU2-36P-201ENST00000410361 191 ntBASIC2.29□□□□□ -2.04
ATL3Q6DD88 Y_RNA.608-201ENST00000410647 95 ntBASIC2.29□□□□□ -2.04
ATL3Q6DD88 RNU6-1328P-201ENST00000410938 106 ntBASIC2.29□□□□□ -2.04
ATL3Q6DD88 AL139156.1-201ENST00000412785 841 ntBASIC2.29□□□□□ -2.04
ATL3Q6DD88 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.29□□□□□ -2.04
ATL3Q6DD88 ELOCP17-201ENST00000414751 326 ntBASIC2.29□□□□□ -2.04
ATL3Q6DD88 AL135786.1-201ENST00000415892 214 ntBASIC2.29□□□□□ -2.04
ATL3Q6DD88 AC027124.2-201ENST00000428249 105 ntBASIC2.29□□□□□ -2.04
ATL3Q6DD88 HMGB1P27-201ENST00000431429 603 ntBASIC2.29□□□□□ -2.04
ATL3Q6DD88 UBE2D3P1-201ENST00000436669 444 ntBASIC2.29□□□□□ -2.04
ATL3Q6DD88 FTH1P25-201ENST00000447665 469 ntBASIC2.29□□□□□ -2.04
ATL3Q6DD88 HMGN2P10-201ENST00000448085 265 ntBASIC2.29□□□□□ -2.04
ATL3Q6DD88 RPL39P36-201ENST00000490784 156 ntBASIC2.29□□□□□ -2.04
ATL3Q6DD88 AC139453.3-201ENST00000493276 369 ntBASIC2.29□□□□□ -2.04
ATL3Q6DD88 AC112204.1-201ENST00000502591 103 ntBASIC2.29□□□□□ -2.04
ATL3Q6DD88 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.29□□□□□ -2.04
ATL3Q6DD88 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
ATL3Q6DD88 AP002770.2-201ENST00000543613 532 ntBASIC2.29□□□□□ -2.04
ATL3Q6DD88 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.29□□□□□ -2.04
ATL3Q6DD88 AC021739.1-201ENST00000559631 174 ntBASIC2.29□□□□□ -2.04
ATL3Q6DD88 MIR5089-201ENST00000580047 84 ntBASIC2.29□□□□□ -2.04
ATL3Q6DD88 AC024619.4-201ENST00000580924 316 ntBASIC2.29□□□□□ -2.04
ATL3Q6DD88 MIR3124-201ENST00000582636 67 ntBASIC2.29□□□□□ -2.04
ATL3Q6DD88 MIR4672-201ENST00000583126 81 ntBASIC2.29□□□□□ -2.04
ATL3Q6DD88 AC090616.2-202ENST00000584248 222 ntBASIC2.29□□□□□ -2.04
ATL3Q6DD88 MIR4448-201ENST00000584360 86 ntBASIC2.29□□□□□ -2.04
ATL3Q6DD88 WISP1-OT1-201ENST00000602893 642 ntBASIC2.29□□□□□ -2.04
ATL3Q6DD88 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.29□□□□□ -2.04
ATL3Q6DD88 AC105129.3-201ENST00000605455 485 ntBASIC2.29□□□□□ -2.04
ATL3Q6DD88 AC138749.5-201ENST00000611461 208 ntBASIC2.29□□□□□ -2.04
ATL3Q6DD88 AC011939.3-201ENST00000613686 466 ntBASIC2.29□□□□□ -2.04
ATL3Q6DD88 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.29□□□□□ -2.04
ATL3Q6DD88 AC116165.2-201ENST00000616705 206 ntBASIC2.29□□□□□ -2.04
ATL3Q6DD88 AC010378.1-201ENST00000619270 362 ntBASIC2.29□□□□□ -2.04
ATL3Q6DD88 MIR6873-201ENST00000622788 63 ntBASIC2.29□□□□□ -2.04
ATL3Q6DD88 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.29□□□□□ -2.04
ATL3Q6DD88 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.29□□□□□ -2.04
ATL3Q6DD88 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
ATL3Q6DD88 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.28□□□□□ -2.04
ATL3Q6DD88 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
ATL3Q6DD88 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.28□□□□□ -2.04
ATL3Q6DD88 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms