Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 RNU6-479P-201ENST00000516348 105 ntBASIC4.59□□□□□ -1.67
RNF43Q68DV7 SNORA67.7-201ENST00000516664 135 ntBASIC4.59□□□□□ -1.67
RNF43Q68DV7 RNU6-914P-201ENST00000516749 109 ntBASIC4.59□□□□□ -1.67
RNF43Q68DV7 SNORA31.18-201ENST00000517043 134 ntBASIC4.59□□□□□ -1.67
RNF43Q68DV7 AC109479.2-201ENST00000517842 174 ntBASIC4.59□□□□□ -1.67
RNF43Q68DV7 IFITM8P-201ENST00000522529 394 ntBASIC4.59□□□□□ -1.67
RNF43Q68DV7 CYP4A43P-201ENST00000568156 121 ntBASIC4.59□□□□□ -1.67
RNF43Q68DV7 AC120057.2-201ENST00000571520 271 ntBASIC4.59□□□□□ -1.67
RNF43Q68DV7 MIR548AC-201ENST00000585049 88 ntBASIC4.59□□□□□ -1.67
RNF43Q68DV7 AC116447.1-201ENST00000613153 453 ntBASIC4.59□□□□□ -1.67
RNF43Q68DV7 AL138721.1-201ENST00000616756 179 ntBASIC4.59□□□□□ -1.67
RNF43Q68DV7 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.67
RNF43Q68DV7 AL023881.1-201ENST00000621088 301 ntBASIC4.59□□□□□ -1.67
RNF43Q68DV7 RNA5SP196-201ENST00000625967 102 ntBASIC4.59□□□□□ -1.67
RNF43Q68DV7 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.59□□□□□ -1.67
RNF43Q68DV7 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
RNF43Q68DV7 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.59□□□□□ -1.68
RNF43Q68DV7 BX322639.1-202ENST00000423987 2213 ntBASIC4.58□□□□□ -1.68
RNF43Q68DV7 PHKBP1-201ENST00000450951 1951 ntBASIC4.58□□□□□ -1.68
RNF43Q68DV7 AC007785.2-201ENST00000598627 1916 ntBASIC4.58□□□□□ -1.68
RNF43Q68DV7 Y_RNA.292-201ENST00000364904 97 ntBASIC4.58□□□□□ -1.68
RNF43Q68DV7 RNU6-290P-201ENST00000365212 101 ntBASIC4.58□□□□□ -1.68
RNF43Q68DV7 RNU1-44P-201ENST00000384453 163 ntBASIC4.58□□□□□ -1.68
RNF43Q68DV7 RNU1-13P-201ENST00000384499 162 ntBASIC4.58□□□□□ -1.68
RNF43Q68DV7 MIR3065-201ENST00000390137 79 ntBASIC4.58□□□□□ -1.68
RNF43Q68DV7 RNU6-1154P-201ENST00000391001 104 ntBASIC4.58□□□□□ -1.68
RNF43Q68DV7 ENSAP1-201ENST00000392855 326 ntBASIC4.58□□□□□ -1.68
RNF43Q68DV7 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.58□□□□□ -1.68
RNF43Q68DV7 MIR190B-201ENST00000401119 79 ntBASIC4.58□□□□□ -1.68
RNF43Q68DV7 SNORA11.1-201ENST00000408133 129 ntBASIC4.58□□□□□ -1.68
RNF43Q68DV7 RPL23AP26-201ENST00000412728 464 ntBASIC4.58□□□□□ -1.68
RNF43Q68DV7 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC4.58□□□□□ -1.68
RNF43Q68DV7 AC099336.2-201ENST00000422457 254 ntBASIC4.58□□□□□ -1.68
RNF43Q68DV7 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RNF43Q68DV7 AC099560.2-201ENST00000457554 255 ntBASIC4.58□□□□□ -1.68
RNF43Q68DV7 AC087477.1-201ENST00000465747 340 ntBASIC4.58□□□□□ -1.68
RNF43Q68DV7 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.58□□□□□ -1.68
RNF43Q68DV7 AL049830.2-201ENST00000480072 201 ntBASIC4.58□□□□□ -1.68
RNF43Q68DV7 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.58□□□□□ -1.68
RNF43Q68DV7 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.58□□□□□ -1.68
RNF43Q68DV7 RNU6-62P-201ENST00000516526 102 ntBASIC4.58□□□□□ -1.68
RNF43Q68DV7 MRPS18CP4-201ENST00000535821 231 ntBASIC4.58□□□□□ -1.68
RNF43Q68DV7 MIR3158-1-201ENST00000583596 81 ntBASIC4.58□□□□□ -1.68
RNF43Q68DV7 AC079587.1-201ENST00000603846 277 ntBASIC4.58□□□□□ -1.68
RNF43Q68DV7 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.58□□□□□ -1.68
RNF43Q68DV7 AC123768.4-201ENST00000616244 701 ntBASIC4.58□□□□□ -1.68
RNF43Q68DV7 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
RNF43Q68DV7 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
RNF43Q68DV7 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
RNF43Q68DV7 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RNF43Q68DV7 AC011266.1-201ENST00000624119 3569 ntBASIC4.58□□□□□ -1.68
RNF43Q68DV7 SAGE4P-201ENST00000442271 3381 ntBASIC4.57□□□□□ -1.68
RNF43Q68DV7 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RNF43Q68DV7 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
RNF43Q68DV7 MFSD8-242ENST00000641690 4199 ntBASIC4.57□□□□□ -1.68
RNF43Q68DV7 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.57□□□□□ -1.68
RNF43Q68DV7 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RNF43Q68DV7 Y_RNA.240-201ENST00000364469 95 ntBASIC4.57□□□□□ -1.68
RNF43Q68DV7 AL022722.2-201ENST00000402519 180 ntBASIC4.57□□□□□ -1.68
RNF43Q68DV7 AL033519.2-201ENST00000403958 392 ntBASIC4.57□□□□□ -1.68
RNF43Q68DV7 MTCYBP2-201ENST00000407745 171 ntBASIC4.57□□□□□ -1.68
RNF43Q68DV7 U3.39-201ENST00000408569 239 ntBASIC4.57□□□□□ -1.68
RNF43Q68DV7 SNORA74C-2-201ENST00000411179 201 ntBASIC4.57□□□□□ -1.68
RNF43Q68DV7 AC063979.1-201ENST00000415539 377 ntBASIC4.57□□□□□ -1.68
RNF43Q68DV7 AL353621.1-201ENST00000418219 243 ntBASIC4.57□□□□□ -1.68
RNF43Q68DV7 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.57□□□□□ -1.68
RNF43Q68DV7 RANP8-201ENST00000444720 713 ntBASIC4.57□□□□□ -1.68
RNF43Q68DV7 AC012671.1-201ENST00000451912 203 ntBASIC4.57□□□□□ -1.68
RNF43Q68DV7 RPL23AP81-201ENST00000455252 467 ntBASIC4.57□□□□□ -1.68
RNF43Q68DV7 PARP4P3-201ENST00000510265 317 ntBASIC4.57□□□□□ -1.68
RNF43Q68DV7 SNORA31.3-201ENST00000516029 96 ntBASIC4.57□□□□□ -1.68
RNF43Q68DV7 RNU6-313P-201ENST00000516317 112 ntBASIC4.57□□□□□ -1.68
RNF43Q68DV7 RN7SKP258-201ENST00000517151 304 ntBASIC4.57□□□□□ -1.68
RNF43Q68DV7 MDM2-232ENST00000544561 213 ntTSL 5 BASIC4.57□□□□□ -1.68
RNF43Q68DV7 AC023824.2-201ENST00000566185 400 ntBASIC4.57□□□□□ -1.68
RNF43Q68DV7 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.57□□□□□ -1.68
RNF43Q68DV7 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.57□□□□□ -1.68
RNF43Q68DV7 AL591034.3-201ENST00000605511 685 ntBASIC4.57□□□□□ -1.68
RNF43Q68DV7 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.57□□□□□ -1.68
RNF43Q68DV7 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.57□□□□□ -1.68
RNF43Q68DV7 LINC00901.1-201ENST00000617252 152 ntBASIC4.57□□□□□ -1.68
RNF43Q68DV7 MIR6130-201ENST00000619419 109 ntBASIC4.57□□□□□ -1.68
RNF43Q68DV7 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RNF43Q68DV7 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.57□□□□□ -1.68
RNF43Q68DV7 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.57□□□□□ -1.68
RNF43Q68DV7 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.57□□□□□ -1.68
RNF43Q68DV7 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
RNF43Q68DV7 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
RNF43Q68DV7 AC139769.1-204ENST00000472297 1931 ntBASIC4.56□□□□□ -1.68
RNF43Q68DV7 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
RNF43Q68DV7 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
RNF43Q68DV7 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
RNF43Q68DV7 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.56□□□□□ -1.68
RNF43Q68DV7 SPRR2C-201ENST00000290702 219 ntBASIC4.56□□□□□ -1.68
RNF43Q68DV7 RNU1-15P-201ENST00000353977 144 ntBASIC4.56□□□□□ -1.68
RNF43Q68DV7 RNU6-989P-201ENST00000362756 107 ntBASIC4.56□□□□□ -1.68
RNF43Q68DV7 Y_RNA.233-201ENST00000364407 101 ntBASIC4.56□□□□□ -1.68
RNF43Q68DV7 SNORA70.4-201ENST00000365509 134 ntBASIC4.56□□□□□ -1.68
RNF43Q68DV7 RNY3P4-201ENST00000384428 101 ntBASIC4.56□□□□□ -1.68
RNF43Q68DV7 SNORA22C-201ENST00000384614 134 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms