Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.94□□□□□ -1.62
USPL1Q5W0Q7 AC131281.1-201ENST00000522984 164 ntBASIC4.94□□□□□ -1.62
USPL1Q5W0Q7 TRAV37-201ENST00000553906 342 ntBASIC4.94□□□□□ -1.62
USPL1Q5W0Q7 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC4.94□□□□□ -1.62
USPL1Q5W0Q7 FAM60BP-201ENST00000578364 658 ntBASIC4.94□□□□□ -1.62
USPL1Q5W0Q7 CPDP1-201ENST00000579660 283 ntBASIC4.94□□□□□ -1.62
USPL1Q5W0Q7 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.94□□□□□ -1.62
USPL1Q5W0Q7 U2.1-201ENST00000618978 145 ntBASIC4.94□□□□□ -1.62
USPL1Q5W0Q7 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
USPL1Q5W0Q7 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
USPL1Q5W0Q7 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
USPL1Q5W0Q7 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
USPL1Q5W0Q7 SCN1A-220ENST00000641603 12506 ntBASIC4.93□□□□□ -1.62
USPL1Q5W0Q7 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
USPL1Q5W0Q7 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
USPL1Q5W0Q7 MIR412-201ENST00000362142 91 ntBASIC4.93□□□□□ -1.62
USPL1Q5W0Q7 RNU6-874P-201ENST00000362390 105 ntBASIC4.93□□□□□ -1.62
USPL1Q5W0Q7 RNU6-784P-201ENST00000384330 106 ntBASIC4.93□□□□□ -1.62
USPL1Q5W0Q7 MIR93-201ENST00000385024 80 ntBASIC4.93□□□□□ -1.62
USPL1Q5W0Q7 AL591034.2-201ENST00000402839 359 ntBASIC4.93□□□□□ -1.62
USPL1Q5W0Q7 MIR1290-201ENST00000408735 78 ntBASIC4.93□□□□□ -1.62
USPL1Q5W0Q7 RNU6-1156P-201ENST00000410365 100 ntBASIC4.93□□□□□ -1.62
USPL1Q5W0Q7 RNU6-325P-201ENST00000411132 105 ntBASIC4.93□□□□□ -1.62
USPL1Q5W0Q7 AL160275.2-201ENST00000412010 394 ntBASIC4.93□□□□□ -1.62
USPL1Q5W0Q7 AC244098.2-201ENST00000422068 99 ntBASIC4.93□□□□□ -1.62
USPL1Q5W0Q7 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
USPL1Q5W0Q7 NDUFB1P2-201ENST00000449477 176 ntBASIC4.93□□□□□ -1.62
USPL1Q5W0Q7 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.93□□□□□ -1.62
USPL1Q5W0Q7 SNORD108-201ENST00000459332 71 ntBASIC4.93□□□□□ -1.62
USPL1Q5W0Q7 AC113155.1-201ENST00000511141 769 ntBASIC4.93□□□□□ -1.62
USPL1Q5W0Q7 SCARNA15.2-201ENST00000516409 127 ntBASIC4.93□□□□□ -1.62
USPL1Q5W0Q7 AP004371.1-201ENST00000525240 214 ntBASIC4.93□□□□□ -1.62
USPL1Q5W0Q7 AC022882.1-201ENST00000532142 501 ntBASIC4.93□□□□□ -1.62
USPL1Q5W0Q7 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.93□□□□□ -1.62
USPL1Q5W0Q7 AL161798.1-201ENST00000604630 131 ntBASIC4.93□□□□□ -1.62
USPL1Q5W0Q7 MIR7975-201ENST00000619350 68 ntBASIC4.93□□□□□ -1.62
USPL1Q5W0Q7 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
USPL1Q5W0Q7 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
USPL1Q5W0Q7 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
USPL1Q5W0Q7 MTND5P7-201ENST00000413558 1798 ntBASIC4.93□□□□□ -1.62
USPL1Q5W0Q7 AC000123.3-201ENST00000624029 4975 ntBASIC4.93□□□□□ -1.62
USPL1Q5W0Q7 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.93□□□□□ -1.62
USPL1Q5W0Q7 AC116096.1-201ENST00000566804 2314 ntBASIC4.92□□□□□ -1.62
USPL1Q5W0Q7 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
USPL1Q5W0Q7 RNY1P16-201ENST00000363063 111 ntBASIC4.92□□□□□ -1.62
USPL1Q5W0Q7 Y_RNA.106-201ENST00000363189 100 ntBASIC4.92□□□□□ -1.62
USPL1Q5W0Q7 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
USPL1Q5W0Q7 Y_RNA.485-201ENST00000384395 102 ntBASIC4.92□□□□□ -1.62
USPL1Q5W0Q7 MIR513A2-201ENST00000385249 127 ntBASIC4.92□□□□□ -1.62
USPL1Q5W0Q7 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.92□□□□□ -1.62
USPL1Q5W0Q7 RPS24P13-201ENST00000442520 397 ntBASIC4.92□□□□□ -1.62
USPL1Q5W0Q7 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC4.92□□□□□ -1.62
USPL1Q5W0Q7 Y_RNA.715-201ENST00000517082 110 ntBASIC4.92□□□□□ -1.62
USPL1Q5W0Q7 AC084851.1-201ENST00000529105 249 ntBASIC4.92□□□□□ -1.62
USPL1Q5W0Q7 TRAV32-201ENST00000553993 340 ntBASIC4.92□□□□□ -1.62
USPL1Q5W0Q7 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
USPL1Q5W0Q7 MIR8062-201ENST00000621515 85 ntBASIC4.92□□□□□ -1.62
USPL1Q5W0Q7 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.92□□□□□ -1.62
USPL1Q5W0Q7 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
USPL1Q5W0Q7 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
USPL1Q5W0Q7 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
USPL1Q5W0Q7 AL136964.1-201ENST00000622038 2990 ntBASIC4.92□□□□□ -1.62
USPL1Q5W0Q7 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.92□□□□□ -1.62
USPL1Q5W0Q7 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
USPL1Q5W0Q7 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.91□□□□□ -1.62
USPL1Q5W0Q7 MARK2P15-201ENST00000432204 2186 ntBASIC4.91□□□□□ -1.62
USPL1Q5W0Q7 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
USPL1Q5W0Q7 RNU6-512P-201ENST00000364438 103 ntBASIC4.91□□□□□ -1.62
USPL1Q5W0Q7 RNU4-42P-201ENST00000364738 142 ntBASIC4.91□□□□□ -1.62
USPL1Q5W0Q7 RNA5SP235-201ENST00000365411 114 ntBASIC4.91□□□□□ -1.62
USPL1Q5W0Q7 RNU6-713P-201ENST00000384761 107 ntBASIC4.91□□□□□ -1.62
USPL1Q5W0Q7 MIR625-201ENST00000385047 85 ntBASIC4.91□□□□□ -1.62
USPL1Q5W0Q7 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
USPL1Q5W0Q7 AL513475.1-201ENST00000406602 315 ntBASIC4.91□□□□□ -1.62
USPL1Q5W0Q7 AL356867.1-201ENST00000429623 299 ntBASIC4.91□□□□□ -1.62
USPL1Q5W0Q7 RPS15AP10-201ENST00000432472 382 ntBASIC4.91□□□□□ -1.62
USPL1Q5W0Q7 AL159987.2-201ENST00000432754 307 ntBASIC4.91□□□□□ -1.62
USPL1Q5W0Q7 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.91□□□□□ -1.62
USPL1Q5W0Q7 RPL21P11-201ENST00000461458 483 ntBASIC4.91□□□□□ -1.62
USPL1Q5W0Q7 AC114801.2-201ENST00000503825 781 ntBASIC4.91□□□□□ -1.62
USPL1Q5W0Q7 AC105758.1-201ENST00000506038 399 ntBASIC4.91□□□□□ -1.62
USPL1Q5W0Q7 RNU1-86P-201ENST00000516108 154 ntBASIC4.91□□□□□ -1.62
USPL1Q5W0Q7 RNU1-107P-201ENST00000516617 154 ntBASIC4.91□□□□□ -1.62
USPL1Q5W0Q7 RNA5SP471-201ENST00000516971 106 ntBASIC4.91□□□□□ -1.62
USPL1Q5W0Q7 AP005902.1-201ENST00000521358 186 ntBASIC4.91□□□□□ -1.62
USPL1Q5W0Q7 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC4.91□□□□□ -1.62
USPL1Q5W0Q7 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.91□□□□□ -1.62
USPL1Q5W0Q7 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC4.91□□□□□ -1.62
USPL1Q5W0Q7 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.91□□□□□ -1.62
USPL1Q5W0Q7 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.91□□□□□ -1.62
USPL1Q5W0Q7 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.91□□□□□ -1.62
USPL1Q5W0Q7 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.91□□□□□ -1.62
USPL1Q5W0Q7 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
USPL1Q5W0Q7 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.91□□□□□ -1.62
USPL1Q5W0Q7 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.91□□□□□ -1.62
USPL1Q5W0Q7 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
USPL1Q5W0Q7 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.9□□□□□ -1.62
USPL1Q5W0Q7 RNU6-379P-201ENST00000363813 104 ntBASIC4.9□□□□□ -1.63
USPL1Q5W0Q7 RNA5SP51-201ENST00000364750 119 ntBASIC4.9□□□□□ -1.63
USPL1Q5W0Q7 U3.15-201ENST00000365398 212 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms