Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 HNRNPDP2-201ENST00000406475 478 ntBASIC0.32□□□□□ -2.36
RIF1Q5UIP0 TRAPPC2P4-201ENST00000421750 331 ntBASIC0.32□□□□□ -2.36
RIF1Q5UIP0 UBE2D3P2-201ENST00000424409 445 ntBASIC0.32□□□□□ -2.36
RIF1Q5UIP0 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC0.32□□□□□ -2.36
RIF1Q5UIP0 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC0.32□□□□□ -2.36
RIF1Q5UIP0 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC0.32□□□□□ -2.36
RIF1Q5UIP0 LSM6P2-201ENST00000552208 177 ntBASIC0.32□□□□□ -2.36
RIF1Q5UIP0 AC004817.2-201ENST00000561794 651 ntBASIC0.32□□□□□ -2.36
RIF1Q5UIP0 AC090616.5-202ENST00000582111 297 ntBASIC0.32□□□□□ -2.36
RIF1Q5UIP0 AC008945.2-201ENST00000606056 604 ntBASIC0.32□□□□□ -2.36
RIF1Q5UIP0 AC012676.2-201ENST00000619258 186 ntBASIC0.32□□□□□ -2.36
RIF1Q5UIP0 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
RIF1Q5UIP0 HSBP1P2-201ENST00000299671 229 ntBASIC0.31□□□□□ -2.36
RIF1Q5UIP0 SNORD3E-201ENST00000362899 217 ntBASIC0.31□□□□□ -2.36
RIF1Q5UIP0 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC0.31□□□□□ -2.36
RIF1Q5UIP0 Y_RNA.568-201ENST00000384742 113 ntBASIC0.31□□□□□ -2.36
RIF1Q5UIP0 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.31□□□□□ -2.36
RIF1Q5UIP0 AL590365.1-201ENST00000450788 243 ntBASIC0.31□□□□□ -2.36
RIF1Q5UIP0 AC087879.1-201ENST00000474343 374 ntBASIC0.31□□□□□ -2.36
RIF1Q5UIP0 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.31□□□□□ -2.36
RIF1Q5UIP0 RNU7-193P-201ENST00000516723 65 ntBASIC0.31□□□□□ -2.36
RIF1Q5UIP0 IGKV1-22-201ENST00000524313 326 ntBASIC0.31□□□□□ -2.36
RIF1Q5UIP0 AP003717.3-201ENST00000544832 1180 ntBASIC0.31□□□□□ -2.36
RIF1Q5UIP0 AC074051.3-201ENST00000570238 358 ntBASIC0.31□□□□□ -2.36
RIF1Q5UIP0 AC090666.1-201ENST00000578241 445 ntBASIC0.31□□□□□ -2.36
RIF1Q5UIP0 MIR5190-201ENST00000581537 80 ntBASIC0.31□□□□□ -2.36
RIF1Q5UIP0 MIR4493-201ENST00000584016 73 ntBASIC0.31□□□□□ -2.36
RIF1Q5UIP0 AP001269.3-201ENST00000588718 329 ntBASIC0.31□□□□□ -2.36
RIF1Q5UIP0 AC004241.3-201ENST00000611728 517 ntBASIC0.31□□□□□ -2.36
RIF1Q5UIP0 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC0.31□□□□□ -2.36
RIF1Q5UIP0 RNU1-105P-201ENST00000363470 161 ntBASIC0.31□□□□□ -2.36
RIF1Q5UIP0 Y_RNA.228-201ENST00000364346 98 ntBASIC0.31□□□□□ -2.36
RIF1Q5UIP0 RNU6-339P-201ENST00000384310 107 ntBASIC0.31□□□□□ -2.36
RIF1Q5UIP0 AL356320.2-201ENST00000417263 507 ntBASIC0.31□□□□□ -2.36
RIF1Q5UIP0 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC0.31□□□□□ -2.36
RIF1Q5UIP0 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC0.31□□□□□ -2.36
RIF1Q5UIP0 RNU6-1037P-201ENST00000459571 107 ntBASIC0.31□□□□□ -2.36
RIF1Q5UIP0 SNORD124-201ENST00000459577 104 ntBASIC0.31□□□□□ -2.36
RIF1Q5UIP0 SETP11-201ENST00000473027 690 ntBASIC0.31□□□□□ -2.36
RIF1Q5UIP0 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC0.31□□□□□ -2.36
RIF1Q5UIP0 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC0.31□□□□□ -2.36
RIF1Q5UIP0 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC0.31□□□□□ -2.36
RIF1Q5UIP0 AL138726.1-201ENST00000614873 333 ntBASIC0.31□□□□□ -2.36
RIF1Q5UIP0 AP002791.1-201ENST00000623291 381 ntBASIC0.31□□□□□ -2.36
RIF1Q5UIP0 AC068880.5-201ENST00000624331 290 ntBASIC0.31□□□□□ -2.36
RIF1Q5UIP0 AC087821.2-201ENST00000637086 450 ntBASIC0.31□□□□□ -2.36
RIF1Q5UIP0 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.31□□□□□ -2.36
RIF1Q5UIP0 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.3□□□□□ -2.36
RIF1Q5UIP0 AL356131.1-201ENST00000405826 414 ntBASIC0.3□□□□□ -2.36
RIF1Q5UIP0 MIR1285-2-201ENST00000408311 88 ntBASIC0.3□□□□□ -2.36
RIF1Q5UIP0 RPL7P30-201ENST00000420888 709 ntBASIC0.3□□□□□ -2.36
RIF1Q5UIP0 RPS25P9-201ENST00000435591 252 ntBASIC0.3□□□□□ -2.36
RIF1Q5UIP0 RPL37P21-201ENST00000435890 276 ntBASIC0.3□□□□□ -2.36
RIF1Q5UIP0 MTND4P6-201ENST00000438297 472 ntBASIC0.3□□□□□ -2.36
RIF1Q5UIP0 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.3□□□□□ -2.36
RIF1Q5UIP0 RPL23AP6-201ENST00000446637 472 ntBASIC0.3□□□□□ -2.36
RIF1Q5UIP0 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC0.3□□□□□ -2.36
RIF1Q5UIP0 RPL30P11-201ENST00000495304 339 ntBASIC0.3□□□□□ -2.36
RIF1Q5UIP0 AC138853.1-201ENST00000503549 823 ntBASIC0.3□□□□□ -2.36
RIF1Q5UIP0 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.3□□□□□ -2.36
RIF1Q5UIP0 MTCYBP41-201ENST00000528913 1123 ntBASIC0.3□□□□□ -2.36
RIF1Q5UIP0 RNY1P9-201ENST00000532431 109 ntBASIC0.3□□□□□ -2.36
RIF1Q5UIP0 AL355297.3-201ENST00000604082 446 ntBASIC0.3□□□□□ -2.36
RIF1Q5UIP0 AC015849.6-201ENST00000605454 474 ntBASIC0.3□□□□□ -2.36
RIF1Q5UIP0 AC073111.2-201ENST00000605657 1075 ntBASIC0.3□□□□□ -2.36
RIF1Q5UIP0 AC018638.7-201ENST00000605836 1114 ntBASIC0.3□□□□□ -2.36
RIF1Q5UIP0 AC090116.1-201ENST00000615679 446 ntBASIC0.3□□□□□ -2.36
RIF1Q5UIP0 AC090132.2-201ENST00000615881 347 ntBASIC0.3□□□□□ -2.36
RIF1Q5UIP0 MIR198-201ENST00000637333 62 ntBASIC0.3□□□□□ -2.36
RIF1Q5UIP0 Y_RNA.410-201ENST00000383992 113 ntBASIC0.3□□□□□ -2.36
RIF1Q5UIP0 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
RIF1Q5UIP0 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.3□□□□□ -2.36
RIF1Q5UIP0 CR769776.1-201ENST00000441254 787 ntBASIC0.3□□□□□ -2.36
RIF1Q5UIP0 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC0.3□□□□□ -2.36
RIF1Q5UIP0 RPS15AP27-201ENST00000449183 343 ntBASIC0.3□□□□□ -2.36
RIF1Q5UIP0 RPL31P20-201ENST00000449593 360 ntBASIC0.3□□□□□ -2.36
RIF1Q5UIP0 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.3□□□□□ -2.36
RIF1Q5UIP0 AC133963.2-201ENST00000513686 578 ntBASIC0.3□□□□□ -2.36
RIF1Q5UIP0 AC006518.2-201ENST00000542513 940 ntBASIC0.3□□□□□ -2.36
RIF1Q5UIP0 CENPUP2-201ENST00000555897 1186 ntBASIC0.3□□□□□ -2.36
RIF1Q5UIP0 AC243960.4-201ENST00000600532 288 ntBASIC0.3□□□□□ -2.36
RIF1Q5UIP0 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC0.3□□□□□ -2.36
RIF1Q5UIP0 MIR4496-201ENST00000635896 61 ntBASIC0.3□□□□□ -2.36
RIF1Q5UIP0 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.29□□□□□ -2.36
RIF1Q5UIP0 AL138880.1-201ENST00000405824 642 ntBASIC0.29□□□□□ -2.36
RIF1Q5UIP0 RPS3AP1-201ENST00000413190 320 ntBASIC0.29□□□□□ -2.36
RIF1Q5UIP0 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC0.29□□□□□ -2.36
RIF1Q5UIP0 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC0.29□□□□□ -2.36
RIF1Q5UIP0 AC092001.1-201ENST00000453012 261 ntBASIC0.29□□□□□ -2.36
RIF1Q5UIP0 RNU6-775P-201ENST00000459318 96 ntBASIC0.29□□□□□ -2.36
RIF1Q5UIP0 AP006587.4-201ENST00000526053 529 ntBASIC0.29□□□□□ -2.36
RIF1Q5UIP0 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC0.29□□□□□ -2.36
RIF1Q5UIP0 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.29□□□□□ -2.36
RIF1Q5UIP0 Y_RNA.352-201ENST00000365439 102 ntBASIC0.29□□□□□ -2.36
RIF1Q5UIP0 SNORA32.3-201ENST00000384772 121 ntBASIC0.29□□□□□ -2.36
RIF1Q5UIP0 NDUFB4P7-201ENST00000423198 363 ntBASIC0.29□□□□□ -2.36
RIF1Q5UIP0 RPL23AP95-201ENST00000426806 265 ntBASIC0.29□□□□□ -2.36
RIF1Q5UIP0 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC0.29□□□□□ -2.36
RIF1Q5UIP0 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC0.29□□□□□ -2.36
RIF1Q5UIP0 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms