Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 ASNSP1-201ENST00000518311 1939 ntBASIC5.54□□□□□ -1.52
RC3H1Q5TC82 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.54□□□□□ -1.52
RC3H1Q5TC82 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
RC3H1Q5TC82 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
RC3H1Q5TC82 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RC3H1Q5TC82 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.54□□□□□ -1.52
RC3H1Q5TC82 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
RC3H1Q5TC82 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
RC3H1Q5TC82 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RC3H1Q5TC82 Y_RNA.262-201ENST00000364641 102 ntBASIC5.54□□□□□ -1.52
RC3H1Q5TC82 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
RC3H1Q5TC82 AC019155.1-201ENST00000382242 574 ntBASIC5.54□□□□□ -1.52
RC3H1Q5TC82 RNU6-926P-201ENST00000384075 107 ntBASIC5.54□□□□□ -1.52
RC3H1Q5TC82 RNU6-21P-201ENST00000384710 107 ntBASIC5.54□□□□□ -1.52
RC3H1Q5TC82 PTMAP2-201ENST00000397627 327 ntBASIC5.54□□□□□ -1.52
RC3H1Q5TC82 OOSP1P1-201ENST00000423265 274 ntBASIC5.54□□□□□ -1.52
RC3H1Q5TC82 PPP1R11P2-201ENST00000423543 382 ntBASIC5.54□□□□□ -1.52
RC3H1Q5TC82 COX6B1P7-201ENST00000430845 235 ntBASIC5.54□□□□□ -1.52
RC3H1Q5TC82 AC090774.1-201ENST00000435925 246 ntBASIC5.54□□□□□ -1.52
RC3H1Q5TC82 RPL12P46-201ENST00000436610 195 ntBASIC5.54□□□□□ -1.52
RC3H1Q5TC82 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.54□□□□□ -1.52
RC3H1Q5TC82 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.54□□□□□ -1.52
RC3H1Q5TC82 SUMO2P6-201ENST00000505273 288 ntBASIC5.54□□□□□ -1.52
RC3H1Q5TC82 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.54□□□□□ -1.52
RC3H1Q5TC82 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC5.54□□□□□ -1.52
RC3H1Q5TC82 AC233702.9-201ENST00000581528 203 ntBASIC5.54□□□□□ -1.52
RC3H1Q5TC82 AL021997.2-201ENST00000615674 271 ntBASIC5.54□□□□□ -1.52
RC3H1Q5TC82 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RC3H1Q5TC82 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RC3H1Q5TC82 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RC3H1Q5TC82 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.54□□□□□ -1.52
RC3H1Q5TC82 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
RC3H1Q5TC82 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
RC3H1Q5TC82 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
RC3H1Q5TC82 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RC3H1Q5TC82 AC233981.2-201ENST00000611524 1614 ntBASIC5.53□□□□□ -1.52
RC3H1Q5TC82 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RC3H1Q5TC82 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC5.53□□□□□ -1.52
RC3H1Q5TC82 RNU6-989P-201ENST00000362756 107 ntBASIC5.53□□□□□ -1.52
RC3H1Q5TC82 SNORA70.4-201ENST00000365509 134 ntBASIC5.53□□□□□ -1.52
RC3H1Q5TC82 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.53□□□□□ -1.52
RC3H1Q5TC82 CYP4F29P-201ENST00000420685 446 ntBASIC5.53□□□□□ -1.52
RC3H1Q5TC82 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC5.53□□□□□ -1.52
RC3H1Q5TC82 AL160314.1-201ENST00000490836 438 ntBASIC5.53□□□□□ -1.52
RC3H1Q5TC82 RNA5SP272-201ENST00000516095 111 ntBASIC5.53□□□□□ -1.52
RC3H1Q5TC82 RNU6-1333P-201ENST00000516162 93 ntBASIC5.53□□□□□ -1.52
RC3H1Q5TC82 RNA5SP519-201ENST00000516480 119 ntBASIC5.53□□□□□ -1.52
RC3H1Q5TC82 IFITM8P-201ENST00000522529 394 ntBASIC5.53□□□□□ -1.52
RC3H1Q5TC82 AK6P2-201ENST00000549020 471 ntBASIC5.53□□□□□ -1.52
RC3H1Q5TC82 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC5.53□□□□□ -1.52
RC3H1Q5TC82 AC103996.1-201ENST00000555468 102 ntBASIC5.53□□□□□ -1.52
RC3H1Q5TC82 MIR3936-201ENST00000584304 110 ntBASIC5.53□□□□□ -1.52
RC3H1Q5TC82 AC067852.4-201ENST00000590314 478 ntBASIC5.53□□□□□ -1.52
RC3H1Q5TC82 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RC3H1Q5TC82 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
RC3H1Q5TC82 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
RC3H1Q5TC82 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
RC3H1Q5TC82 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
RC3H1Q5TC82 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
RC3H1Q5TC82 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RC3H1Q5TC82 AL592182.3-201ENST00000642132 3304 ntBASIC5.53□□□□□ -1.52
RC3H1Q5TC82 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
RC3H1Q5TC82 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.52□□□□□ -1.53
RC3H1Q5TC82 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC5.52□□□□□ -1.53
RC3H1Q5TC82 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RC3H1Q5TC82 MIR410-201ENST00000362222 80 ntBASIC5.52□□□□□ -1.53
RC3H1Q5TC82 RNU5B-2P-201ENST00000363036 113 ntBASIC5.52□□□□□ -1.53
RC3H1Q5TC82 MIR569-201ENST00000385228 96 ntBASIC5.52□□□□□ -1.53
RC3H1Q5TC82 RNU6-821P-201ENST00000390995 107 ntBASIC5.52□□□□□ -1.53
RC3H1Q5TC82 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC5.52□□□□□ -1.53
RC3H1Q5TC82 RPS29P27-201ENST00000463711 170 ntBASIC5.52□□□□□ -1.53
RC3H1Q5TC82 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC5.52□□□□□ -1.53
RC3H1Q5TC82 RNU7-110P-201ENST00000516891 62 ntBASIC5.52□□□□□ -1.53
RC3H1Q5TC82 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.52□□□□□ -1.53
RC3H1Q5TC82 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC5.52□□□□□ -1.53
RC3H1Q5TC82 AC112693.2-201ENST00000556538 232 ntBASIC5.52□□□□□ -1.53
RC3H1Q5TC82 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.52□□□□□ -1.53
RC3H1Q5TC82 AC099506.2-201ENST00000623074 221 ntBASIC5.52□□□□□ -1.53
RC3H1Q5TC82 MIR4275-201ENST00000636486 87 ntBASIC5.52□□□□□ -1.53
RC3H1Q5TC82 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC5.52□□□□□ -1.53
RC3H1Q5TC82 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.52□□□□□ -1.53
RC3H1Q5TC82 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
RC3H1Q5TC82 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.52□□□□□ -1.53
RC3H1Q5TC82 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RC3H1Q5TC82 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC5.52□□□□□ -1.53
RC3H1Q5TC82 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.52□□□□□ -1.53
RC3H1Q5TC82 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RC3H1Q5TC82 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RC3H1Q5TC82 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
RC3H1Q5TC82 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.51□□□□□ -1.53
RC3H1Q5TC82 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
RC3H1Q5TC82 RNA5SP175-201ENST00000364275 119 ntBASIC5.51□□□□□ -1.53
RC3H1Q5TC82 SNORA46.1-201ENST00000391069 153 ntBASIC5.51□□□□□ -1.53
RC3H1Q5TC82 RPL21P65-201ENST00000406094 466 ntBASIC5.51□□□□□ -1.53
RC3H1Q5TC82 RNU2-52P-201ENST00000410680 190 ntBASIC5.51□□□□□ -1.53
RC3H1Q5TC82 RNU6-603P-201ENST00000411403 107 ntBASIC5.51□□□□□ -1.53
RC3H1Q5TC82 AL117339.3-201ENST00000418733 162 ntBASIC5.51□□□□□ -1.53
RC3H1Q5TC82 AL391219.1-201ENST00000422570 483 ntBASIC5.51□□□□□ -1.53
RC3H1Q5TC82 UQCRBP2-201ENST00000447827 297 ntBASIC5.51□□□□□ -1.53
RC3H1Q5TC82 TOMM22P6-201ENST00000465035 409 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms