Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
ATPAF1Q5TC12 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
ATPAF1Q5TC12 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
ATPAF1Q5TC12 AC138393.1-203ENST00000327086 343 ntBASIC3.2□□□□□ -1.9
ATPAF1Q5TC12 Y_RNA.88-201ENST00000363029 99 ntBASIC3.2□□□□□ -1.9
ATPAF1Q5TC12 Y_RNA.100-201ENST00000363141 102 ntBASIC3.2□□□□□ -1.9
ATPAF1Q5TC12 U3.37-201ENST00000408528 213 ntBASIC3.2□□□□□ -1.9
ATPAF1Q5TC12 RAB9AP3-201ENST00000412737 573 ntBASIC3.2□□□□□ -1.9
ATPAF1Q5TC12 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.2□□□□□ -1.9
ATPAF1Q5TC12 USP9YP20-201ENST00000419224 558 ntBASIC3.2□□□□□ -1.9
ATPAF1Q5TC12 AC245291.1-201ENST00000419501 328 ntBASIC3.2□□□□□ -1.9
ATPAF1Q5TC12 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.2□□□□□ -1.9
ATPAF1Q5TC12 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.2□□□□□ -1.9
ATPAF1Q5TC12 AC009414.1-201ENST00000427200 443 ntBASIC3.2□□□□□ -1.9
ATPAF1Q5TC12 TOMM20P4-201ENST00000427861 435 ntBASIC3.2□□□□□ -1.9
ATPAF1Q5TC12 AL159987.2-201ENST00000432754 307 ntBASIC3.2□□□□□ -1.9
ATPAF1Q5TC12 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.2□□□□□ -1.9
ATPAF1Q5TC12 RAB9AP1-201ENST00000449393 573 ntBASIC3.2□□□□□ -1.9
ATPAF1Q5TC12 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.2□□□□□ -1.9
ATPAF1Q5TC12 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.2□□□□□ -1.9
ATPAF1Q5TC12 AC002456.2-201ENST00000509356 380 ntBASIC3.2□□□□□ -1.9
ATPAF1Q5TC12 AC010486.1-201ENST00000511793 424 ntBASIC3.2□□□□□ -1.9
ATPAF1Q5TC12 RNA5SP208-201ENST00000516156 78 ntBASIC3.2□□□□□ -1.9
ATPAF1Q5TC12 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.2□□□□□ -1.9
ATPAF1Q5TC12 RNU6-323P-201ENST00000521915 107 ntBASIC3.2□□□□□ -1.9
ATPAF1Q5TC12 AC008011.1-201ENST00000545989 227 ntBASIC3.2□□□□□ -1.9
ATPAF1Q5TC12 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.2□□□□□ -1.9
ATPAF1Q5TC12 RN7SL703P-201ENST00000578485 302 ntBASIC3.2□□□□□ -1.9
ATPAF1Q5TC12 RNU6-85P-201ENST00000605989 107 ntBASIC3.2□□□□□ -1.9
ATPAF1Q5TC12 AL357078.3-201ENST00000607528 618 ntBASIC3.2□□□□□ -1.9
ATPAF1Q5TC12 AC011890.2-201ENST00000613393 294 ntBASIC3.2□□□□□ -1.9
ATPAF1Q5TC12 AC010378.1-201ENST00000619270 362 ntBASIC3.2□□□□□ -1.9
ATPAF1Q5TC12 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.2□□□□□ -1.9
ATPAF1Q5TC12 CDC27P3-201ENST00000635418 1910 ntBASIC3.2□□□□□ -1.9
ATPAF1Q5TC12 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
ATPAF1Q5TC12 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
ATPAF1Q5TC12 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
ATPAF1Q5TC12 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
ATPAF1Q5TC12 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
ATPAF1Q5TC12 AC007496.3-201ENST00000624987 3443 ntBASIC3.19□□□□□ -1.9
ATPAF1Q5TC12 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
ATPAF1Q5TC12 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ATPAF1Q5TC12 RNU1-105P-201ENST00000363470 161 ntBASIC3.19□□□□□ -1.9
ATPAF1Q5TC12 RNU6-1280P-201ENST00000365211 107 ntBASIC3.19□□□□□ -1.9
ATPAF1Q5TC12 RNU1-100P-201ENST00000365255 165 ntBASIC3.19□□□□□ -1.9
ATPAF1Q5TC12 RNY3P14-201ENST00000384309 102 ntBASIC3.19□□□□□ -1.9
ATPAF1Q5TC12 Y_RNA.530-201ENST00000384587 101 ntBASIC3.19□□□□□ -1.9
ATPAF1Q5TC12 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.19□□□□□ -1.9
ATPAF1Q5TC12 MTND4LP11-201ENST00000422184 280 ntBASIC3.19□□□□□ -1.9
ATPAF1Q5TC12 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.19□□□□□ -1.9
ATPAF1Q5TC12 AL671855.1-201ENST00000446875 1203 ntBASIC3.19□□□□□ -1.9
ATPAF1Q5TC12 AC125238.1-201ENST00000448842 249 ntBASIC3.19□□□□□ -1.9
ATPAF1Q5TC12 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.19□□□□□ -1.9
ATPAF1Q5TC12 AC006539.3-201ENST00000454258 129 ntBASIC3.19□□□□□ -1.9
ATPAF1Q5TC12 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.19□□□□□ -1.9
ATPAF1Q5TC12 RNU7-66P-201ENST00000459469 62 ntBASIC3.19□□□□□ -1.9
ATPAF1Q5TC12 AC092185.1-201ENST00000491371 97 ntBASIC3.19□□□□□ -1.9
ATPAF1Q5TC12 AC079140.5-201ENST00000507882 310 ntBASIC3.19□□□□□ -1.9
ATPAF1Q5TC12 AC116655.1-201ENST00000508324 901 ntBASIC3.19□□□□□ -1.9
ATPAF1Q5TC12 HMGN1P11-201ENST00000508668 303 ntBASIC3.19□□□□□ -1.9
ATPAF1Q5TC12 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.19□□□□□ -1.9
ATPAF1Q5TC12 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.19□□□□□ -1.9
ATPAF1Q5TC12 SNORA20.3-201ENST00000516880 132 ntBASIC3.19□□□□□ -1.9
ATPAF1Q5TC12 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.19□□□□□ -1.9
ATPAF1Q5TC12 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.19□□□□□ -1.9
ATPAF1Q5TC12 AC118273.2-201ENST00000532092 465 ntBASIC3.19□□□□□ -1.9
ATPAF1Q5TC12 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.19□□□□□ -1.9
ATPAF1Q5TC12 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.19□□□□□ -1.9
ATPAF1Q5TC12 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.19□□□□□ -1.9
ATPAF1Q5TC12 AC025281.1-201ENST00000567026 265 ntBASIC3.19□□□□□ -1.9
ATPAF1Q5TC12 MIR548S-201ENST00000581352 82 ntBASIC3.19□□□□□ -1.9
ATPAF1Q5TC12 AC011712.1-201ENST00000588959 234 ntBASIC3.19□□□□□ -1.9
ATPAF1Q5TC12 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.19□□□□□ -1.9
ATPAF1Q5TC12 MIR6798-201ENST00000612887 67 ntBASIC3.19□□□□□ -1.9
ATPAF1Q5TC12 AC093913.1-201ENST00000614178 329 ntBASIC3.19□□□□□ -1.9
ATPAF1Q5TC12 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.19□□□□□ -1.9
ATPAF1Q5TC12 FP236240.3-201ENST00000623061 327 ntBASIC3.19□□□□□ -1.9
ATPAF1Q5TC12 AC002064.3-201ENST00000623448 346 ntBASIC3.19□□□□□ -1.9
ATPAF1Q5TC12 Z69720.2-201ENST00000624755 279 ntBASIC3.19□□□□□ -1.9
ATPAF1Q5TC12 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.19□□□□□ -1.9
ATPAF1Q5TC12 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.19□□□□□ -1.9
ATPAF1Q5TC12 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ATPAF1Q5TC12 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
ATPAF1Q5TC12 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.19□□□□□ -1.9
ATPAF1Q5TC12 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
ATPAF1Q5TC12 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.18□□□□□ -1.9
ATPAF1Q5TC12 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
ATPAF1Q5TC12 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
ATPAF1Q5TC12 AL161912.2-201ENST00000565707 3007 ntBASIC3.18□□□□□ -1.9
ATPAF1Q5TC12 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
ATPAF1Q5TC12 RNU6-254P-201ENST00000363377 107 ntBASIC3.18□□□□□ -1.9
ATPAF1Q5TC12 RNU6-831P-201ENST00000384548 107 ntBASIC3.18□□□□□ -1.9
ATPAF1Q5TC12 MIR767-201ENST00000390228 109 ntBASIC3.18□□□□□ -1.9
ATPAF1Q5TC12 RNA5SP354-201ENST00000391247 136 ntBASIC3.18□□□□□ -1.9
ATPAF1Q5TC12 MIR450B-201ENST00000401182 78 ntBASIC3.18□□□□□ -1.9
ATPAF1Q5TC12 RAP1BP3-201ENST00000407180 549 ntBASIC3.18□□□□□ -1.9
ATPAF1Q5TC12 MIR1193-201ENST00000408109 78 ntBASIC3.18□□□□□ -1.9
ATPAF1Q5TC12 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.18□□□□□ -1.9
ATPAF1Q5TC12 RPL21P111-201ENST00000418453 477 ntBASIC3.18□□□□□ -1.9
ATPAF1Q5TC12 NDUFA5P4-201ENST00000436704 385 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms