Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 RBMY2UP-201ENST00000453474 324 ntBASIC3.39□□□□□ -1.87
CCDC38Q502W7 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC38Q502W7 FCF1P8-201ENST00000510322 597 ntBASIC3.39□□□□□ -1.87
CCDC38Q502W7 RAC1P5-201ENST00000512182 576 ntBASIC3.39□□□□□ -1.87
CCDC38Q502W7 SEPT14P4-201ENST00000513445 186 ntBASIC3.39□□□□□ -1.87
CCDC38Q502W7 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.39□□□□□ -1.87
CCDC38Q502W7 FO082796.1-201ENST00000523795 183 ntBASIC3.39□□□□□ -1.87
CCDC38Q502W7 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.39□□□□□ -1.87
CCDC38Q502W7 AC234778.2-201ENST00000566241 354 ntBASIC3.39□□□□□ -1.87
CCDC38Q502W7 AC106782.4-201ENST00000568264 210 ntBASIC3.39□□□□□ -1.87
CCDC38Q502W7 AC015917.1-201ENST00000579654 510 ntBASIC3.39□□□□□ -1.87
CCDC38Q502W7 AC005498.1-201ENST00000592125 465 ntBASIC3.39□□□□□ -1.87
CCDC38Q502W7 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC38Q502W7 MIR6134-201ENST00000617606 109 ntBASIC3.39□□□□□ -1.87
CCDC38Q502W7 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.39□□□□□ -1.87
CCDC38Q502W7 ADAM3A-203ENST00000461344 2157 ntBASIC3.39□□□□□ -1.87
CCDC38Q502W7 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC38Q502W7 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC38Q502W7 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC38Q502W7 AC099654.7-201ENST00000635788 2127 ntBASIC3.38□□□□□ -1.87
CCDC38Q502W7 SNORA63.1-201ENST00000362493 131 ntBASIC3.38□□□□□ -1.87
CCDC38Q502W7 SNORD3E-201ENST00000362899 217 ntBASIC3.38□□□□□ -1.87
CCDC38Q502W7 RNY4P14-201ENST00000363656 96 ntBASIC3.38□□□□□ -1.87
CCDC38Q502W7 RNA5SP387-201ENST00000364226 106 ntBASIC3.38□□□□□ -1.87
CCDC38Q502W7 RNU6-434P-201ENST00000384376 107 ntBASIC3.38□□□□□ -1.87
CCDC38Q502W7 SNORD70.1-201ENST00000391007 85 ntBASIC3.38□□□□□ -1.87
CCDC38Q502W7 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.38□□□□□ -1.87
CCDC38Q502W7 SNORA11.1-201ENST00000408133 129 ntBASIC3.38□□□□□ -1.87
CCDC38Q502W7 RNU6-648P-201ENST00000410190 107 ntBASIC3.38□□□□□ -1.87
CCDC38Q502W7 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.38□□□□□ -1.87
CCDC38Q502W7 USP9YP27-201ENST00000418455 438 ntBASIC3.38□□□□□ -1.87
CCDC38Q502W7 C8orf59P1-201ENST00000429930 303 ntBASIC3.38□□□□□ -1.87
CCDC38Q502W7 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC38Q502W7 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC38Q502W7 WASF1P1-201ENST00000447560 1131 ntBASIC3.38□□□□□ -1.87
CCDC38Q502W7 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC38Q502W7 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.38□□□□□ -1.87
CCDC38Q502W7 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC38Q502W7 snoU13.22-201ENST00000459428 104 ntBASIC3.38□□□□□ -1.87
CCDC38Q502W7 RPS29P12-201ENST00000460178 152 ntBASIC3.38□□□□□ -1.87
CCDC38Q502W7 RPL23AP11-201ENST00000475260 469 ntBASIC3.38□□□□□ -1.87
CCDC38Q502W7 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC38Q502W7 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC38Q502W7 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC38Q502W7 RNA5SP401-201ENST00000515920 127 ntBASIC3.38□□□□□ -1.87
CCDC38Q502W7 SNORA31.26-201ENST00000517250 137 ntBASIC3.38□□□□□ -1.87
CCDC38Q502W7 AC109635.3-201ENST00000529536 185 ntBASIC3.38□□□□□ -1.87
CCDC38Q502W7 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.38□□□□□ -1.87
CCDC38Q502W7 AC007458.1-201ENST00000542812 373 ntBASIC3.38□□□□□ -1.87
CCDC38Q502W7 AC073539.2-201ENST00000597113 165 ntBASIC3.38□□□□□ -1.87
CCDC38Q502W7 U3.45-201ENST00000607547 219 ntBASIC3.38□□□□□ -1.87
CCDC38Q502W7 AC069200.1-201ENST00000609511 323 ntBASIC3.38□□□□□ -1.87
CCDC38Q502W7 AL356321.1-201ENST00000621360 228 ntBASIC3.38□□□□□ -1.87
CCDC38Q502W7 YWHAEP7-203ENST00000622054 312 ntBASIC3.38□□□□□ -1.87
CCDC38Q502W7 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC38Q502W7 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC38Q502W7 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC38Q502W7 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC38Q502W7 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC38Q502W7 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC38Q502W7 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
CCDC38Q502W7 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC38Q502W7 SNORD14B-201ENST00000364533 90 ntBASIC3.37□□□□□ -1.87
CCDC38Q502W7 RNU4-12P-201ENST00000365233 139 ntBASIC3.37□□□□□ -1.87
CCDC38Q502W7 SNORA70.4-201ENST00000365509 134 ntBASIC3.37□□□□□ -1.87
CCDC38Q502W7 U8.9-201ENST00000365667 134 ntBASIC3.37□□□□□ -1.87
CCDC38Q502W7 Y_RNA.450-201ENST00000384198 113 ntBASIC3.37□□□□□ -1.87
CCDC38Q502W7 MIR490-201ENST00000384865 128 ntBASIC3.37□□□□□ -1.87
CCDC38Q502W7 RNU6-750P-201ENST00000390946 107 ntBASIC3.37□□□□□ -1.87
CCDC38Q502W7 SNORD37.1-201ENST00000390968 65 ntBASIC3.37□□□□□ -1.87
CCDC38Q502W7 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC38Q502W7 RNU2-49P-201ENST00000410666 184 ntBASIC3.37□□□□□ -1.87
CCDC38Q502W7 RNU6-193P-201ENST00000410977 107 ntBASIC3.37□□□□□ -1.87
CCDC38Q502W7 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC38Q502W7 AL592148.1-201ENST00000413568 445 ntBASIC3.37□□□□□ -1.87
CCDC38Q502W7 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.37□□□□□ -1.87
CCDC38Q502W7 AC096649.2-201ENST00000416186 393 ntBASIC3.37□□□□□ -1.87
CCDC38Q502W7 ZNF885P-201ENST00000420174 1098 ntBASIC3.37□□□□□ -1.87
CCDC38Q502W7 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC38Q502W7 MTCO1P20-201ENST00000425366 358 ntBASIC3.37□□□□□ -1.87
CCDC38Q502W7 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC38Q502W7 AC009414.1-201ENST00000427200 443 ntBASIC3.37□□□□□ -1.87
CCDC38Q502W7 CST9LP2-201ENST00000437612 320 ntBASIC3.37□□□□□ -1.87
CCDC38Q502W7 RPS15AP27-201ENST00000449183 343 ntBASIC3.37□□□□□ -1.87
CCDC38Q502W7 AC115115.1-201ENST00000449927 248 ntBASIC3.37□□□□□ -1.87
CCDC38Q502W7 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.37□□□□□ -1.87
CCDC38Q502W7 MTND3P25-201ENST00000509243 135 ntBASIC3.37□□□□□ -1.87
CCDC38Q502W7 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC38Q502W7 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC38Q502W7 MTND4P7-201ENST00000523876 130 ntBASIC3.37□□□□□ -1.87
CCDC38Q502W7 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CCDC38Q502W7 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC38Q502W7 AC006199.1-201ENST00000548728 219 ntBASIC3.37□□□□□ -1.87
CCDC38Q502W7 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC38Q502W7 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC38Q502W7 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC38Q502W7 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.37□□□□□ -1.87
CCDC38Q502W7 MIR4424-201ENST00000585257 86 ntBASIC3.37□□□□□ -1.87
CCDC38Q502W7 AP003465.2-201ENST00000602571 373 ntBASIC3.37□□□□□ -1.87
CCDC38Q502W7 AC012119.1-201ENST00000603184 222 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms