Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC96Q2M329 RNU6-181P-201ENST00000363225 107 ntBASIC3.29□□□□□ -1.88
CCDC96Q2M329 RNY3P13-201ENST00000365542 102 ntBASIC3.29□□□□□ -1.88
CCDC96Q2M329 MIR181A1-201ENST00000385026 110 ntBASIC3.29□□□□□ -1.88
CCDC96Q2M329 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CCDC96Q2M329 AC127391.1-201ENST00000411737 98 ntBASIC3.29□□□□□ -1.88
CCDC96Q2M329 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.29□□□□□ -1.88
CCDC96Q2M329 AC007283.2-201ENST00000424739 197 ntBASIC3.29□□□□□ -1.88
CCDC96Q2M329 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC96Q2M329 MTCO2P19-201ENST00000427513 598 ntBASIC3.29□□□□□ -1.88
CCDC96Q2M329 RPS15AP5-201ENST00000436276 388 ntBASIC3.29□□□□□ -1.88
CCDC96Q2M329 SNRPEP9-201ENST00000436794 238 ntBASIC3.29□□□□□ -1.88
CCDC96Q2M329 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC96Q2M329 PSPHP1-201ENST00000450062 261 ntBASIC3.29□□□□□ -1.88
CCDC96Q2M329 AP004217.1-201ENST00000480579 346 ntBASIC3.29□□□□□ -1.88
CCDC96Q2M329 AF213884.2-201ENST00000510417 903 ntBASIC3.29□□□□□ -1.88
CCDC96Q2M329 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC96Q2M329 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC96Q2M329 RNU6-445P-201ENST00000516949 107 ntBASIC3.29□□□□□ -1.88
CCDC96Q2M329 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC96Q2M329 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC96Q2M329 AC079600.2-201ENST00000550076 130 ntBASIC3.29□□□□□ -1.88
CCDC96Q2M329 AC087883.1-201ENST00000551882 391 ntBASIC3.29□□□□□ -1.88
CCDC96Q2M329 AC027807.1-201ENST00000559921 996 ntBASIC3.29□□□□□ -1.88
CCDC96Q2M329 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC96Q2M329 AL391646.1-201ENST00000603860 190 ntBASIC3.29□□□□□ -1.88
CCDC96Q2M329 ATP1B3P1-201ENST00000605365 821 ntBASIC3.29□□□□□ -1.88
CCDC96Q2M329 AC092954.2-201ENST00000609103 430 ntBASIC3.29□□□□□ -1.88
CCDC96Q2M329 AC069234.5-201ENST00000611056 416 ntBASIC3.29□□□□□ -1.88
CCDC96Q2M329 AL133173.2-201ENST00000614270 90 ntBASIC3.29□□□□□ -1.88
CCDC96Q2M329 AL359880.1-201ENST00000621879 266 ntBASIC3.29□□□□□ -1.88
CCDC96Q2M329 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC96Q2M329 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.28□□□□□ -1.88
CCDC96Q2M329 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC96Q2M329 Y_RNA.159-201ENST00000363674 87 ntBASIC3.28□□□□□ -1.88
CCDC96Q2M329 SNORA68.1-201ENST00000364537 132 ntBASIC3.28□□□□□ -1.88
CCDC96Q2M329 AL512633.1-201ENST00000399931 655 ntBASIC3.28□□□□□ -1.88
CCDC96Q2M329 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.28□□□□□ -1.88
CCDC96Q2M329 RNU2-62P-201ENST00000410868 191 ntBASIC3.28□□□□□ -1.88
CCDC96Q2M329 NDUFS5P4-201ENST00000412983 318 ntBASIC3.28□□□□□ -1.88
CCDC96Q2M329 HMGB1P9-201ENST00000429856 646 ntBASIC3.28□□□□□ -1.88
CCDC96Q2M329 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.28□□□□□ -1.88
CCDC96Q2M329 AL451074.3-201ENST00000437709 472 ntBASIC3.28□□□□□ -1.88
CCDC96Q2M329 FGF7P6-202ENST00000451282 293 ntBASIC3.28□□□□□ -1.88
CCDC96Q2M329 AC019235.1-201ENST00000503847 207 ntBASIC3.28□□□□□ -1.88
CCDC96Q2M329 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC96Q2M329 RNU6-64P-201ENST00000517119 105 ntBASIC3.28□□□□□ -1.88
CCDC96Q2M329 RNU6-1220P-201ENST00000517126 108 ntBASIC3.28□□□□□ -1.88
CCDC96Q2M329 MTND4LP26-201ENST00000518144 282 ntBASIC3.28□□□□□ -1.88
CCDC96Q2M329 AC109329.2-201ENST00000519658 482 ntBASIC3.28□□□□□ -1.88
CCDC96Q2M329 FAM92A1P1-201ENST00000528023 890 ntBASIC3.28□□□□□ -1.88
CCDC96Q2M329 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC96Q2M329 MTATP6P3-201ENST00000581686 676 ntBASIC3.28□□□□□ -1.88
CCDC96Q2M329 AP000860.1-201ENST00000605250 559 ntBASIC3.28□□□□□ -1.88
CCDC96Q2M329 AC017083.3-201ENST00000609955 700 ntBASIC3.28□□□□□ -1.88
CCDC96Q2M329 AL157786.1-207ENST00000627771 695 ntBASIC3.28□□□□□ -1.88
CCDC96Q2M329 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.27□□□□□ -1.89
CCDC96Q2M329 Y_RNA.296-201ENST00000364930 108 ntBASIC3.27□□□□□ -1.89
CCDC96Q2M329 RNU6-108P-201ENST00000365558 107 ntBASIC3.27□□□□□ -1.89
CCDC96Q2M329 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
CCDC96Q2M329 SNORA20.2-201ENST00000383922 131 ntBASIC3.27□□□□□ -1.89
CCDC96Q2M329 MIR512-1-201ENST00000384913 84 ntBASIC3.27□□□□□ -1.89
CCDC96Q2M329 MTCO3P40-201ENST00000392516 676 ntBASIC3.27□□□□□ -1.89
CCDC96Q2M329 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC96Q2M329 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC96Q2M329 RPS15AP12-201ENST00000419498 388 ntBASIC3.27□□□□□ -1.89
CCDC96Q2M329 EIF1P1-201ENST00000421436 341 ntBASIC3.27□□□□□ -1.89
CCDC96Q2M329 ISCA1P1-201ENST00000426679 387 ntBASIC3.27□□□□□ -1.89
CCDC96Q2M329 AC137499.1-201ENST00000427602 88 ntBASIC3.27□□□□□ -1.89
CCDC96Q2M329 ELOCP14-201ENST00000428070 331 ntBASIC3.27□□□□□ -1.89
CCDC96Q2M329 AC119618.1-201ENST00000434191 222 ntBASIC3.27□□□□□ -1.89
CCDC96Q2M329 ELOCP7-201ENST00000439968 331 ntBASIC3.27□□□□□ -1.89
CCDC96Q2M329 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC96Q2M329 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC96Q2M329 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.27□□□□□ -1.89
CCDC96Q2M329 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC96Q2M329 AP001893.2-201ENST00000526949 202 ntBASIC3.27□□□□□ -1.89
CCDC96Q2M329 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC96Q2M329 MIR4319-201ENST00000577285 85 ntBASIC3.27□□□□□ -1.89
CCDC96Q2M329 MIR98-201ENST00000606724 119 ntBASIC3.27□□□□□ -1.89
CCDC96Q2M329 AC068944.2-201ENST00000610373 403 ntBASIC3.27□□□□□ -1.89
CCDC96Q2M329 AL158209.2-201ENST00000619266 216 ntBASIC3.27□□□□□ -1.89
CCDC96Q2M329 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC96Q2M329 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC96Q2M329 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC96Q2M329 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC96Q2M329 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC96Q2M329 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.26□□□□□ -1.89
CCDC96Q2M329 MAPK10-266ENST00000641066 6555 ntBASIC3.26□□□□□ -1.89
CCDC96Q2M329 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC96Q2M329 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC96Q2M329 RNU1-35P-201ENST00000362782 153 ntBASIC3.26□□□□□ -1.89
CCDC96Q2M329 Y_RNA.554-201ENST00000384672 102 ntBASIC3.26□□□□□ -1.89
CCDC96Q2M329 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC96Q2M329 CALM2P3-201ENST00000400429 449 ntBASIC3.26□□□□□ -1.89
CCDC96Q2M329 MIR548F1-201ENST00000408667 84 ntBASIC3.26□□□□□ -1.89
CCDC96Q2M329 RNU4-55P-201ENST00000410731 137 ntBASIC3.26□□□□□ -1.89
CCDC96Q2M329 AC096649.2-201ENST00000416186 393 ntBASIC3.26□□□□□ -1.89
CCDC96Q2M329 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.26□□□□□ -1.89
CCDC96Q2M329 USP9YP18-201ENST00000425912 695 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 163.9 ms