Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 BNIP3P2-201ENST00000441221 577 ntBASIC3.17□□□□□ -1.9
PDS5AQ29RF7 AC016691.1-201ENST00000441321 413 ntBASIC3.17□□□□□ -1.9
PDS5AQ29RF7 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.17□□□□□ -1.9
PDS5AQ29RF7 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.17□□□□□ -1.9
PDS5AQ29RF7 AL590639.1-201ENST00000456484 337 ntBASIC3.17□□□□□ -1.9
PDS5AQ29RF7 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.17□□□□□ -1.9
PDS5AQ29RF7 PRDX4P1-201ENST00000507189 574 ntBASIC3.17□□□□□ -1.9
PDS5AQ29RF7 RNU6-390P-201ENST00000516259 103 ntBASIC3.17□□□□□ -1.9
PDS5AQ29RF7 SNORA40.12-201ENST00000516329 111 ntBASIC3.17□□□□□ -1.9
PDS5AQ29RF7 RNU6-835P-201ENST00000516974 104 ntBASIC3.17□□□□□ -1.9
PDS5AQ29RF7 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.17□□□□□ -1.9
PDS5AQ29RF7 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.17□□□□□ -1.9
PDS5AQ29RF7 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.17□□□□□ -1.9
PDS5AQ29RF7 MED28P6-201ENST00000558776 231 ntBASIC3.17□□□□□ -1.9
PDS5AQ29RF7 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.17□□□□□ -1.9
PDS5AQ29RF7 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.17□□□□□ -1.9
PDS5AQ29RF7 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.17□□□□□ -1.9
PDS5AQ29RF7 AC024619.4-201ENST00000580924 316 ntBASIC3.17□□□□□ -1.9
PDS5AQ29RF7 MIR4775-201ENST00000581168 75 ntBASIC3.17□□□□□ -1.9
PDS5AQ29RF7 AC078899.3-201ENST00000599065 212 ntBASIC3.17□□□□□ -1.9
PDS5AQ29RF7 FER-210ENST00000628534 558 ntTSL 5 BASIC3.17□□□□□ -1.9
PDS5AQ29RF7 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.16□□□□□ -1.9
PDS5AQ29RF7 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.16□□□□□ -1.9
PDS5AQ29RF7 CKAP2P1-201ENST00000555477 2049 ntBASIC3.16□□□□□ -1.9
PDS5AQ29RF7 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PDS5AQ29RF7 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.16□□□□□ -1.9
PDS5AQ29RF7 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PDS5AQ29RF7 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PDS5AQ29RF7 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.16□□□□□ -1.9
PDS5AQ29RF7 AL365361.1-201ENST00000566942 3481 ntBASIC3.16□□□□□ -1.9
PDS5AQ29RF7 Y_RNA.38-201ENST00000362617 102 ntBASIC3.16□□□□□ -1.9
PDS5AQ29RF7 Y_RNA.295-201ENST00000364918 102 ntBASIC3.16□□□□□ -1.9
PDS5AQ29RF7 Y_RNA.381-201ENST00000365666 102 ntBASIC3.16□□□□□ -1.9
PDS5AQ29RF7 SNORA69-201ENST00000383895 132 ntBASIC3.16□□□□□ -1.9
PDS5AQ29RF7 RNU6-641P-201ENST00000384006 107 ntBASIC3.16□□□□□ -1.9
PDS5AQ29RF7 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PDS5AQ29RF7 ZNF90P2-204ENST00000419323 1075 ntBASIC3.16□□□□□ -1.9
PDS5AQ29RF7 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PDS5AQ29RF7 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.16□□□□□ -1.9
PDS5AQ29RF7 RPL21P66-201ENST00000426566 466 ntBASIC3.16□□□□□ -1.9
PDS5AQ29RF7 AC008850.1-201ENST00000427546 362 ntBASIC3.16□□□□□ -1.9
PDS5AQ29RF7 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.16□□□□□ -1.9
PDS5AQ29RF7 RPL21P2-201ENST00000440049 481 ntBASIC3.16□□□□□ -1.9
PDS5AQ29RF7 MTATP6P23-201ENST00000440153 476 ntBASIC3.16□□□□□ -1.9
PDS5AQ29RF7 MTCO3P18-201ENST00000440206 761 ntBASIC3.16□□□□□ -1.9
PDS5AQ29RF7 AC011816.1-201ENST00000441346 546 ntBASIC3.16□□□□□ -1.9
PDS5AQ29RF7 WASF1P1-201ENST00000447560 1131 ntBASIC3.16□□□□□ -1.9
PDS5AQ29RF7 NFU1P2-201ENST00000448700 469 ntBASIC3.16□□□□□ -1.9
PDS5AQ29RF7 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.16□□□□□ -1.9
PDS5AQ29RF7 RNU7-182P-201ENST00000459009 62 ntBASIC3.16□□□□□ -1.9
PDS5AQ29RF7 AC128713.1-201ENST00000471495 306 ntBASIC3.16□□□□□ -1.9
PDS5AQ29RF7 VN1R17P-201ENST00000472048 1090 ntBASIC3.16□□□□□ -1.9
PDS5AQ29RF7 RPS29P25-201ENST00000481709 171 ntBASIC3.16□□□□□ -1.9
PDS5AQ29RF7 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.16□□□□□ -1.9
PDS5AQ29RF7 SNORA31.26-201ENST00000517250 137 ntBASIC3.16□□□□□ -1.9
PDS5AQ29RF7 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.16□□□□□ -1.9
PDS5AQ29RF7 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.16□□□□□ -1.9
PDS5AQ29RF7 AC008752.3-201ENST00000588113 712 ntBASIC3.16□□□□□ -1.9
PDS5AQ29RF7 AC174048.1-201ENST00000603389 144 ntBASIC3.16□□□□□ -1.9
PDS5AQ29RF7 AP001486.3-201ENST00000615334 372 ntBASIC3.16□□□□□ -1.9
PDS5AQ29RF7 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.16□□□□□ -1.9
PDS5AQ29RF7 AC116096.1-201ENST00000566804 2314 ntBASIC3.16□□□□□ -1.9
PDS5AQ29RF7 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
PDS5AQ29RF7 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.15□□□□□ -1.9
PDS5AQ29RF7 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
PDS5AQ29RF7 SDAD1P2-201ENST00000441308 2028 ntBASIC3.15□□□□□ -1.91
PDS5AQ29RF7 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.15□□□□□ -1.91
PDS5AQ29RF7 AC006020.1-201ENST00000420179 1854 ntBASIC3.15□□□□□ -1.91
PDS5AQ29RF7 FTLP6-201ENST00000355274 422 ntBASIC3.15□□□□□ -1.91
PDS5AQ29RF7 SMIM11P1-201ENST00000369586 178 ntBASIC3.15□□□□□ -1.91
PDS5AQ29RF7 SNORA26.7-201ENST00000391288 122 ntBASIC3.15□□□□□ -1.91
PDS5AQ29RF7 FGF7P8-201ENST00000402994 292 ntBASIC3.15□□□□□ -1.91
PDS5AQ29RF7 SNORD88.1-201ENST00000408684 91 ntBASIC3.15□□□□□ -1.91
PDS5AQ29RF7 RNA5SP129-201ENST00000410276 118 ntBASIC3.15□□□□□ -1.91
PDS5AQ29RF7 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.15□□□□□ -1.91
PDS5AQ29RF7 RPL7P46-201ENST00000425129 740 ntBASIC3.15□□□□□ -1.91
PDS5AQ29RF7 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.15□□□□□ -1.91
PDS5AQ29RF7 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.15□□□□□ -1.91
PDS5AQ29RF7 MTND4P18-201ENST00000447010 465 ntBASIC3.15□□□□□ -1.91
PDS5AQ29RF7 AC020550.1-201ENST00000447385 163 ntBASIC3.15□□□□□ -1.91
PDS5AQ29RF7 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.15□□□□□ -1.91
PDS5AQ29RF7 RPS20P20-201ENST00000460498 340 ntBASIC3.15□□□□□ -1.91
PDS5AQ29RF7 MRPS17P3-201ENST00000465453 385 ntBASIC3.15□□□□□ -1.91
PDS5AQ29RF7 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.15□□□□□ -1.91
PDS5AQ29RF7 RNA5SP148-201ENST00000516527 94 ntBASIC3.15□□□□□ -1.91
PDS5AQ29RF7 RN7SKP282-201ENST00000516824 299 ntBASIC3.15□□□□□ -1.91
PDS5AQ29RF7 AC109329.2-201ENST00000519658 482 ntBASIC3.15□□□□□ -1.91
PDS5AQ29RF7 AP006587.4-201ENST00000526053 529 ntBASIC3.15□□□□□ -1.91
PDS5AQ29RF7 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.15□□□□□ -1.91
PDS5AQ29RF7 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.15□□□□□ -1.91
PDS5AQ29RF7 MTCO3P24-201ENST00000572729 782 ntBASIC3.15□□□□□ -1.91
PDS5AQ29RF7 MIR4298-201ENST00000584380 73 ntBASIC3.15□□□□□ -1.91
PDS5AQ29RF7 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.15□□□□□ -1.91
PDS5AQ29RF7 BDH2P1-201ENST00000602288 736 ntBASIC3.15□□□□□ -1.91
PDS5AQ29RF7 AP001330.4-201ENST00000604350 154 ntBASIC3.15□□□□□ -1.91
PDS5AQ29RF7 AL354950.2-201ENST00000617939 290 ntBASIC3.15□□□□□ -1.91
PDS5AQ29RF7 API5P2-201ENST00000397055 1498 ntBASIC3.14□□□□□ -1.91
PDS5AQ29RF7 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.14□□□□□ -1.91
PDS5AQ29RF7 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.14□□□□□ -1.91
PDS5AQ29RF7 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms