Protein–RNA interactions for Protein: Q15651

HMGN3, High mobility group nucleosome-binding domain-containing protein 3, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3Q15651 RNA5SP384-201ENST00000516615 116 ntBASIC0.48□□□□□ -2.33
HMGN3Q15651 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.48□□□□□ -2.33
HMGN3Q15651 AP003484.1-201ENST00000530974 250 ntBASIC0.48□□□□□ -2.33
HMGN3Q15651 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.48□□□□□ -2.33
HMGN3Q15651 AC044913.1-201ENST00000557200 430 ntBASIC0.48□□□□□ -2.33
HMGN3Q15651 CYP3A137P-201ENST00000562436 69 ntBASIC0.48□□□□□ -2.33
HMGN3Q15651 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC0.48□□□□□ -2.33
HMGN3Q15651 AC010900.2-201ENST00000604508 210 ntBASIC0.48□□□□□ -2.33
HMGN3Q15651 AC069304.2-201ENST00000605154 435 ntBASIC0.48□□□□□ -2.33
HMGN3Q15651 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.48□□□□□ -2.33
HMGN3Q15651 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
HMGN3Q15651 MTND4P16-201ENST00000466108 1367 ntBASIC0.47□□□□□ -2.33
HMGN3Q15651 MIR135A2-201ENST00000384854 100 ntBASIC0.47□□□□□ -2.33
HMGN3Q15651 MIR561-201ENST00000385216 97 ntBASIC0.47□□□□□ -2.33
HMGN3Q15651 AL591034.2-201ENST00000402839 359 ntBASIC0.47□□□□□ -2.33
HMGN3Q15651 RNU2-64P-201ENST00000411315 191 ntBASIC0.47□□□□□ -2.33
HMGN3Q15651 AC078974.1-201ENST00000411597 223 ntBASIC0.47□□□□□ -2.33
HMGN3Q15651 ZNF863P-201ENST00000426746 417 ntBASIC0.47□□□□□ -2.33
HMGN3Q15651 FO393419.3-201ENST00000428741 282 ntBASIC0.47□□□□□ -2.33
HMGN3Q15651 AL591043.1-201ENST00000432461 424 ntBASIC0.47□□□□□ -2.33
HMGN3Q15651 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.47□□□□□ -2.33
HMGN3Q15651 UBE2V1P5-201ENST00000440070 405 ntBASIC0.47□□□□□ -2.33
HMGN3Q15651 MTCO1P53-201ENST00000441633 699 ntBASIC0.47□□□□□ -2.33
HMGN3Q15651 AC006512.1-201ENST00000468816 291 ntBASIC0.47□□□□□ -2.33
HMGN3Q15651 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.47□□□□□ -2.33
HMGN3Q15651 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC0.47□□□□□ -2.33
HMGN3Q15651 DUXAP1-201ENST00000556632 463 ntBASIC0.47□□□□□ -2.33
HMGN3Q15651 SULT1C2P1-202ENST00000562418 459 ntBASIC0.47□□□□□ -2.33
HMGN3Q15651 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.47□□□□□ -2.33
HMGN3Q15651 AC133485.1-201ENST00000567176 124 ntBASIC0.47□□□□□ -2.33
HMGN3Q15651 AC138907.6-201ENST00000568401 126 ntBASIC0.47□□□□□ -2.33
HMGN3Q15651 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.47□□□□□ -2.33
HMGN3Q15651 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.47□□□□□ -2.33
HMGN3Q15651 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.47□□□□□ -2.33
HMGN3Q15651 SNRPGP17-201ENST00000603780 214 ntBASIC0.47□□□□□ -2.33
HMGN3Q15651 BNIP3P10-201ENST00000605360 577 ntBASIC0.47□□□□□ -2.33
HMGN3Q15651 AC087045.1-201ENST00000605856 382 ntBASIC0.47□□□□□ -2.33
HMGN3Q15651 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC0.47□□□□□ -2.33
HMGN3Q15651 AL365204.3-201ENST00000612448 685 ntBASIC0.47□□□□□ -2.33
HMGN3Q15651 MIR8063-201ENST00000621930 81 ntBASIC0.47□□□□□ -2.33
HMGN3Q15651 U6.107-201ENST00000637108 79 ntBASIC0.47□□□□□ -2.33
HMGN3Q15651 OR4G1P-203ENST00000641984 1631 ntBASIC0.46□□□□□ -2.34
HMGN3Q15651 RNU6-921P-201ENST00000384361 107 ntBASIC0.46□□□□□ -2.34
HMGN3Q15651 MIR649-201ENST00000384843 97 ntBASIC0.46□□□□□ -2.34
HMGN3Q15651 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
HMGN3Q15651 RNU2-43P-201ENST00000410306 190 ntBASIC0.46□□□□□ -2.34
HMGN3Q15651 USP9YP26-201ENST00000421008 661 ntBASIC0.46□□□□□ -2.34
HMGN3Q15651 USP9YP18-201ENST00000425912 695 ntBASIC0.46□□□□□ -2.34
HMGN3Q15651 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC0.46□□□□□ -2.34
HMGN3Q15651 USP9YP17-201ENST00000444617 696 ntBASIC0.46□□□□□ -2.34
HMGN3Q15651 USP9YP34-201ENST00000453983 808 ntBASIC0.46□□□□□ -2.34
HMGN3Q15651 AC112492.4-201ENST00000456549 352 ntBASIC0.46□□□□□ -2.34
HMGN3Q15651 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.46□□□□□ -2.34
HMGN3Q15651 AC025465.3-201ENST00000510570 311 ntBASIC0.46□□□□□ -2.34
HMGN3Q15651 NDUFA5P6-201ENST00000542110 379 ntBASIC0.46□□□□□ -2.34
HMGN3Q15651 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.46□□□□□ -2.34
HMGN3Q15651 AC009268.1-201ENST00000561352 1203 ntBASIC0.46□□□□□ -2.34
HMGN3Q15651 MIR4661-201ENST00000582720 75 ntBASIC0.46□□□□□ -2.34
HMGN3Q15651 WISP1-OT1-201ENST00000602893 642 ntBASIC0.46□□□□□ -2.34
HMGN3Q15651 AL021879.1-201ENST00000611756 288 ntBASIC0.46□□□□□ -2.34
HMGN3Q15651 AL359314.1-201ENST00000616913 261 ntBASIC0.46□□□□□ -2.34
HMGN3Q15651 AC073569.3-201ENST00000619055 682 ntBASIC0.46□□□□□ -2.34
HMGN3Q15651 AC009318.4-201ENST00000620496 486 ntBASIC0.46□□□□□ -2.34
HMGN3Q15651 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.45□□□□□ -2.34
HMGN3Q15651 MIR514A1-201ENST00000385133 98 ntBASIC0.45□□□□□ -2.34
HMGN3Q15651 AL117342.1-201ENST00000404861 406 ntBASIC0.45□□□□□ -2.34
HMGN3Q15651 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.45□□□□□ -2.34
HMGN3Q15651 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC0.45□□□□□ -2.34
HMGN3Q15651 BPY2DP-201ENST00000422208 265 ntBASIC0.45□□□□□ -2.34
HMGN3Q15651 FO393414.1-201ENST00000428697 1184 ntBASIC0.45□□□□□ -2.34
HMGN3Q15651 NANOGP2-201ENST00000435391 727 ntBASIC0.45□□□□□ -2.34
HMGN3Q15651 HSPE1P13-201ENST00000451143 297 ntBASIC0.45□□□□□ -2.34
HMGN3Q15651 OR9N1P-202ENST00000494289 481 ntBASIC0.45□□□□□ -2.34
HMGN3Q15651 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.45□□□□□ -2.34
HMGN3Q15651 MTCYBP16-201ENST00000509187 1129 ntBASIC0.45□□□□□ -2.34
HMGN3Q15651 HSPA8P13-201ENST00000523715 472 ntBASIC0.45□□□□□ -2.34
HMGN3Q15651 HSPE1P4-201ENST00000550617 308 ntBASIC0.45□□□□□ -2.34
HMGN3Q15651 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.45□□□□□ -2.34
HMGN3Q15651 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.45□□□□□ -2.34
HMGN3Q15651 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.45□□□□□ -2.34
HMGN3Q15651 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.45□□□□□ -2.34
HMGN3Q15651 AL161729.4-201ENST00000604650 476 ntBASIC0.45□□□□□ -2.34
HMGN3Q15651 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.45□□□□□ -2.34
HMGN3Q15651 AC009541.1-201ENST00000438279 2662 ntBASIC0.44□□□□□ -2.34
HMGN3Q15651 MIR337-201ENST00000362281 93 ntBASIC0.44□□□□□ -2.34
HMGN3Q15651 RNU1-23P-201ENST00000363361 144 ntBASIC0.44□□□□□ -2.34
HMGN3Q15651 SNORA29-201ENST00000384183 140 ntBASIC0.44□□□□□ -2.34
HMGN3Q15651 RNU6-17P-201ENST00000384245 107 ntBASIC0.44□□□□□ -2.34
HMGN3Q15651 RNU6-18P-201ENST00000384527 107 ntBASIC0.44□□□□□ -2.34
HMGN3Q15651 RNU6-140P-201ENST00000384566 108 ntBASIC0.44□□□□□ -2.34
HMGN3Q15651 MIR29C-201ENST00000385231 88 ntBASIC0.44□□□□□ -2.34
HMGN3Q15651 RNA5SP100-201ENST00000410903 110 ntBASIC0.44□□□□□ -2.34
HMGN3Q15651 RNA5SP59-201ENST00000410922 110 ntBASIC0.44□□□□□ -2.34
HMGN3Q15651 USP9YP33-201ENST00000412220 421 ntBASIC0.44□□□□□ -2.34
HMGN3Q15651 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.44□□□□□ -2.34
HMGN3Q15651 ISCA1P6-201ENST00000427740 390 ntBASIC0.44□□□□□ -2.34
HMGN3Q15651 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC0.44□□□□□ -2.34
HMGN3Q15651 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.44□□□□□ -2.34
HMGN3Q15651 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.44□□□□□ -2.34
HMGN3Q15651 AL078601.1-201ENST00000444542 271 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms