Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 RNU6-102P-201ENST00000384485 104 ntBASIC4.44□□□□□ -1.7
PCDH1Q08174 PCNPP3-201ENST00000393579 471 ntBASIC4.44□□□□□ -1.7
PCDH1Q08174 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC4.44□□□□□ -1.7
PCDH1Q08174 TMSB10P2-201ENST00000416049 131 ntBASIC4.44□□□□□ -1.7
PCDH1Q08174 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.44□□□□□ -1.7
PCDH1Q08174 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.44□□□□□ -1.7
PCDH1Q08174 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.44□□□□□ -1.7
PCDH1Q08174 RPS29P22-201ENST00000472363 168 ntBASIC4.44□□□□□ -1.7
PCDH1Q08174 RPS26P21-201ENST00000475397 348 ntBASIC4.44□□□□□ -1.7
PCDH1Q08174 SERF1AP1-201ENST00000514575 187 ntBASIC4.44□□□□□ -1.7
PCDH1Q08174 RN7SKP272-201ENST00000516988 232 ntBASIC4.44□□□□□ -1.7
PCDH1Q08174 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.44□□□□□ -1.7
PCDH1Q08174 MIR4643-201ENST00000577473 78 ntBASIC4.44□□□□□ -1.7
PCDH1Q08174 AC053481.4-201ENST00000583164 216 ntBASIC4.44□□□□□ -1.7
PCDH1Q08174 AC011476.5-201ENST00000615594 130 ntBASIC4.44□□□□□ -1.7
PCDH1Q08174 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
PCDH1Q08174 AC127459.3-201ENST00000624328 466 ntBASIC4.44□□□□□ -1.7
PCDH1Q08174 SCARNA4-201ENST00000629045 128 ntBASIC4.44□□□□□ -1.7
PCDH1Q08174 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.44□□□□□ -1.7
PCDH1Q08174 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PCDH1Q08174 AL136164.3-201ENST00000624429 3978 ntBASIC4.44□□□□□ -1.7
PCDH1Q08174 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PCDH1Q08174 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PCDH1Q08174 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.43□□□□□ -1.7
PCDH1Q08174 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDH1Q08174 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PCDH1Q08174 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDH1Q08174 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.43□□□□□ -1.7
PCDH1Q08174 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDH1Q08174 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.43□□□□□ -1.7
PCDH1Q08174 RNU6-222P-201ENST00000362438 107 ntBASIC4.43□□□□□ -1.7
PCDH1Q08174 Y_RNA.464-201ENST00000384282 110 ntBASIC4.43□□□□□ -1.7
PCDH1Q08174 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDH1Q08174 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.43□□□□□ -1.7
PCDH1Q08174 AL049745.1-201ENST00000433953 286 ntBASIC4.43□□□□□ -1.7
PCDH1Q08174 SNRPEP9-201ENST00000436794 238 ntBASIC4.43□□□□□ -1.7
PCDH1Q08174 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.43□□□□□ -1.7
PCDH1Q08174 SNORA31.8-201ENST00000516327 108 ntBASIC4.43□□□□□ -1.7
PCDH1Q08174 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.43□□□□□ -1.7
PCDH1Q08174 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.43□□□□□ -1.7
PCDH1Q08174 AC091178.1-203ENST00000584586 279 ntBASIC4.43□□□□□ -1.7
PCDH1Q08174 AC010928.2-201ENST00000588017 287 ntBASIC4.43□□□□□ -1.7
PCDH1Q08174 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC4.43□□□□□ -1.7
PCDH1Q08174 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.43□□□□□ -1.7
PCDH1Q08174 BPIFA4P-203ENST00000603168 689 ntBASIC4.43□□□□□ -1.7
PCDH1Q08174 AC136601.2-201ENST00000604356 474 ntBASIC4.43□□□□□ -1.7
PCDH1Q08174 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.43□□□□□ -1.7
PCDH1Q08174 AC091953.3-201ENST00000623220 236 ntBASIC4.43□□□□□ -1.7
PCDH1Q08174 AC097372.5-201ENST00000623665 376 ntBASIC4.43□□□□□ -1.7
PCDH1Q08174 U3.53-201ENST00000628922 216 ntBASIC4.43□□□□□ -1.7
PCDH1Q08174 U6.99-201ENST00000637524 83 ntBASIC4.43□□□□□ -1.7
PCDH1Q08174 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
PCDH1Q08174 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.43□□□□□ -1.7
PCDH1Q08174 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.43□□□□□ -1.7
PCDH1Q08174 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDH1Q08174 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.43□□□□□ -1.7
PCDH1Q08174 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDH1Q08174 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
PCDH1Q08174 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.43□□□□□ -1.7
PCDH1Q08174 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PCDH1Q08174 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
PCDH1Q08174 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PCDH1Q08174 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PCDH1Q08174 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
PCDH1Q08174 RNU6-290P-201ENST00000365212 101 ntBASIC4.42□□□□□ -1.7
PCDH1Q08174 MIR708-201ENST00000390708 88 ntBASIC4.42□□□□□ -1.7
PCDH1Q08174 RNA5SP397-201ENST00000391323 118 ntBASIC4.42□□□□□ -1.7
PCDH1Q08174 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.42□□□□□ -1.7
PCDH1Q08174 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.42□□□□□ -1.7
PCDH1Q08174 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC4.42□□□□□ -1.7
PCDH1Q08174 AP000907.1-201ENST00000428428 510 ntBASIC4.42□□□□□ -1.7
PCDH1Q08174 AC007389.2-201ENST00000434630 306 ntBASIC4.42□□□□□ -1.7
PCDH1Q08174 AC009296.1-201ENST00000443146 155 ntBASIC4.42□□□□□ -1.7
PCDH1Q08174 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.42□□□□□ -1.7
PCDH1Q08174 AP006245.1-201ENST00000522549 120 ntBASIC4.42□□□□□ -1.7
PCDH1Q08174 MRPS36P4-201ENST00000534436 298 ntBASIC4.42□□□□□ -1.7
PCDH1Q08174 CBX3P4-201ENST00000538909 354 ntBASIC4.42□□□□□ -1.7
PCDH1Q08174 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.42□□□□□ -1.7
PCDH1Q08174 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.42□□□□□ -1.7
PCDH1Q08174 MIR4782-201ENST00000577987 79 ntBASIC4.42□□□□□ -1.7
PCDH1Q08174 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PCDH1Q08174 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PCDH1Q08174 CPHL1P-201ENST00000461341 3407 ntBASIC4.42□□□□□ -1.7
PCDH1Q08174 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
PCDH1Q08174 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
PCDH1Q08174 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PCDH1Q08174 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
PCDH1Q08174 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDH1Q08174 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDH1Q08174 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDH1Q08174 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDH1Q08174 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.41□□□□□ -1.7
PCDH1Q08174 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.41□□□□□ -1.7
PCDH1Q08174 Z73965.1-201ENST00000623412 2297 ntBASIC4.41□□□□□ -1.7
PCDH1Q08174 AC021146.4-201ENST00000309229 279 ntBASIC4.41□□□□□ -1.7
PCDH1Q08174 RNU6-545P-201ENST00000362681 104 ntBASIC4.41□□□□□ -1.7
PCDH1Q08174 Y_RNA.199-201ENST00000364014 102 ntBASIC4.41□□□□□ -1.7
PCDH1Q08174 RNU6-968P-201ENST00000384076 107 ntBASIC4.41□□□□□ -1.7
PCDH1Q08174 RNU6-17P-201ENST00000384245 107 ntBASIC4.41□□□□□ -1.7
PCDH1Q08174 RNU6-662P-201ENST00000384253 104 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms