Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC000111.3-201ENST00000433478 193 ntBASIC2.58□□□□□ -2
SCN1BQ07699 MTCO3P5-201ENST00000433620 714 ntBASIC2.58□□□□□ -2
SCN1BQ07699 KATNBL1P3-201ENST00000443475 909 ntBASIC2.58□□□□□ -2
SCN1BQ07699 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.58□□□□□ -2
SCN1BQ07699 AP000936.2-201ENST00000447151 681 ntBASIC2.58□□□□□ -2
SCN1BQ07699 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.58□□□□□ -2
SCN1BQ07699 AL360271.2-201ENST00000447710 161 ntBASIC2.58□□□□□ -2
SCN1BQ07699 AC104058.1-201ENST00000448028 297 ntBASIC2.58□□□□□ -2
SCN1BQ07699 AC080013.2-201ENST00000460866 323 ntBASIC2.58□□□□□ -2
SCN1BQ07699 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.58□□□□□ -2
SCN1BQ07699 AC104806.1-201ENST00000508720 308 ntBASIC2.58□□□□□ -2
SCN1BQ07699 TBCAP3-201ENST00000512475 312 ntBASIC2.58□□□□□ -2
SCN1BQ07699 SNORA9.3-201ENST00000516383 129 ntBASIC2.58□□□□□ -2
SCN1BQ07699 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.58□□□□□ -2
SCN1BQ07699 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.58□□□□□ -2
SCN1BQ07699 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.58□□□□□ -2
SCN1BQ07699 AL356575.1-201ENST00000603008 283 ntBASIC2.58□□□□□ -2
SCN1BQ07699 AC024153.1-201ENST00000603103 365 ntBASIC2.58□□□□□ -2
SCN1BQ07699 AC008739.3-201ENST00000603262 127 ntBASIC2.58□□□□□ -2
SCN1BQ07699 AL138889.2-201ENST00000603883 242 ntBASIC2.58□□□□□ -2
SCN1BQ07699 AC008147.4-201ENST00000617570 1204 ntBASIC2.58□□□□□ -2
SCN1BQ07699 MIR7975-201ENST00000619350 68 ntBASIC2.58□□□□□ -2
SCN1BQ07699 U6.114-201ENST00000636407 96 ntBASIC2.58□□□□□ -2
SCN1BQ07699 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.58□□□□□ -2
SCN1BQ07699 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.57□□□□□ -2
SCN1BQ07699 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SCN1BQ07699 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SCN1BQ07699 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SCN1BQ07699 SNORA38-201ENST00000363946 132 ntBASIC2.57□□□□□ -2
SCN1BQ07699 RNU6-282P-201ENST00000365357 103 ntBASIC2.57□□□□□ -2
SCN1BQ07699 RNU6-108P-201ENST00000365558 107 ntBASIC2.57□□□□□ -2
SCN1BQ07699 RNU6-116P-201ENST00000384042 109 ntBASIC2.57□□□□□ -2
SCN1BQ07699 RNU6-74P-201ENST00000384235 107 ntBASIC2.57□□□□□ -2
SCN1BQ07699 RNU6-72P-201ENST00000384285 79 ntBASIC2.57□□□□□ -2
SCN1BQ07699 MIR1-2-201ENST00000384961 85 ntBASIC2.57□□□□□ -2
SCN1BQ07699 MIR34A-201ENST00000385130 110 ntBASIC2.57□□□□□ -2
SCN1BQ07699 U6atac.2-201ENST00000408644 118 ntBASIC2.57□□□□□ -2
SCN1BQ07699 RPL21P90-201ENST00000415692 466 ntBASIC2.57□□□□□ -2
SCN1BQ07699 AC090960.1-201ENST00000421072 306 ntBASIC2.57□□□□□ -2
SCN1BQ07699 AC097463.2-201ENST00000421074 142 ntBASIC2.57□□□□□ -2
SCN1BQ07699 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.57□□□□□ -2
SCN1BQ07699 AC133104.1-201ENST00000429100 218 ntBASIC2.57□□□□□ -2
SCN1BQ07699 AC236972.1-201ENST00000433225 199 ntBASIC2.57□□□□□ -2
SCN1BQ07699 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.57□□□□□ -2
SCN1BQ07699 AL031667.1-201ENST00000440222 725 ntBASIC2.57□□□□□ -2
SCN1BQ07699 MTND2P4-201ENST00000445034 1004 ntBASIC2.57□□□□□ -2
SCN1BQ07699 AC079448.1-201ENST00000449377 373 ntBASIC2.57□□□□□ -2
SCN1BQ07699 NDUFB1P2-201ENST00000449477 176 ntBASIC2.57□□□□□ -2
SCN1BQ07699 AC091153.1-201ENST00000466297 402 ntBASIC2.57□□□□□ -2
SCN1BQ07699 AC010486.3-201ENST00000511602 785 ntBASIC2.57□□□□□ -2
SCN1BQ07699 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.57□□□□□ -2
SCN1BQ07699 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.57□□□□□ -2
SCN1BQ07699 MTCYBP33-201ENST00000575007 1130 ntBASIC2.57□□□□□ -2
SCN1BQ07699 AC009163.5-201ENST00000575421 637 ntBASIC2.57□□□□□ -2
SCN1BQ07699 MIR1254-2-201ENST00000579553 63 ntBASIC2.57□□□□□ -2
SCN1BQ07699 MIR5194-201ENST00000582634 120 ntBASIC2.57□□□□□ -2
SCN1BQ07699 AC098614.4-201ENST00000607601 462 ntBASIC2.57□□□□□ -2
SCN1BQ07699 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.57□□□□□ -2
SCN1BQ07699 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.57□□□□□ -2
SCN1BQ07699 MTND5P17-201ENST00000418405 1603 ntBASIC2.57□□□□□ -2
SCN1BQ07699 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.56□□□□□ -2
SCN1BQ07699 MIR22-201ENST00000362190 85 ntBASIC2.56□□□□□ -2
SCN1BQ07699 RNA5SP72-201ENST00000364442 117 ntBASIC2.56□□□□□ -2
SCN1BQ07699 RNU4-47P-201ENST00000410876 114 ntBASIC2.56□□□□□ -2
SCN1BQ07699 AL353621.1-201ENST00000418219 243 ntBASIC2.56□□□□□ -2
SCN1BQ07699 MTCYBP5-201ENST00000423752 1135 ntBASIC2.56□□□□□ -2
SCN1BQ07699 AC005326.1-201ENST00000429197 123 ntBASIC2.56□□□□□ -2
SCN1BQ07699 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.56□□□□□ -2
SCN1BQ07699 USP9YP29-201ENST00000445112 563 ntBASIC2.56□□□□□ -2
SCN1BQ07699 HIGD1AP2-201ENST00000446367 280 ntBASIC2.56□□□□□ -2
SCN1BQ07699 RPL7P12-201ENST00000446719 750 ntBASIC2.56□□□□□ -2
SCN1BQ07699 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.56□□□□□ -2
SCN1BQ07699 AL162395.1-201ENST00000457882 422 ntBASIC2.56□□□□□ -2
SCN1BQ07699 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.56□□□□□ -2
SCN1BQ07699 MED28P2-201ENST00000475771 317 ntBASIC2.56□□□□□ -2
SCN1BQ07699 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.56□□□□□ -2
SCN1BQ07699 AC117522.3-201ENST00000507974 584 ntBASIC2.56□□□□□ -2
SCN1BQ07699 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.56□□□□□ -2
SCN1BQ07699 AC074250.1-201ENST00000511117 192 ntBASIC2.56□□□□□ -2
SCN1BQ07699 AC114781.4-201ENST00000513707 639 ntBASIC2.56□□□□□ -2
SCN1BQ07699 MIR892C-201ENST00000516410 77 ntBASIC2.56□□□□□ -2
SCN1BQ07699 AP004607.1-201ENST00000524456 203 ntBASIC2.56□□□□□ -2
SCN1BQ07699 OR5AQ1P-201ENST00000527596 927 ntBASIC2.56□□□□□ -2
SCN1BQ07699 AP003072.2-201ENST00000527756 676 ntBASIC2.56□□□□□ -2
SCN1BQ07699 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.56□□□□□ -2
SCN1BQ07699 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.56□□□□□ -2
SCN1BQ07699 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2.56□□□□□ -2
SCN1BQ07699 MIR4429-201ENST00000580105 73 ntBASIC2.56□□□□□ -2
SCN1BQ07699 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.56□□□□□ -2
SCN1BQ07699 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.56□□□□□ -2
SCN1BQ07699 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.56□□□□□ -2
SCN1BQ07699 AC084757.4-201ENST00000616350 526 ntBASIC2.56□□□□□ -2
SCN1BQ07699 AL449363.1-201ENST00000617815 186 ntBASIC2.56□□□□□ -2
SCN1BQ07699 AC024581.2-201ENST00000619986 252 ntBASIC2.56□□□□□ -2
SCN1BQ07699 Z69908.1-201ENST00000622603 247 ntBASIC2.56□□□□□ -2
SCN1BQ07699 AC244517.12-201ENST00000623581 663 ntBASIC2.56□□□□□ -2
SCN1BQ07699 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.56□□□□□ -2
SCN1BQ07699 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.56□□□□□ -2
SCN1BQ07699 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.55□□□□□ -2
SCN1BQ07699 AC138393.1-203ENST00000327086 343 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms