Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 Z98742.3-201ENST00000418637 326 ntBASIC2.04□□□□□ -2.08
HMGCS1Q01581 MORF4L1P6-201ENST00000418771 268 ntBASIC2.04□□□□□ -2.08
HMGCS1Q01581 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.04□□□□□ -2.08
HMGCS1Q01581 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.04□□□□□ -2.08
HMGCS1Q01581 BPY2DP-201ENST00000422208 265 ntBASIC2.04□□□□□ -2.08
HMGCS1Q01581 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.04□□□□□ -2.08
HMGCS1Q01581 RAC1P6-201ENST00000423911 575 ntBASIC2.04□□□□□ -2.08
HMGCS1Q01581 AL356583.2-201ENST00000426536 280 ntBASIC2.04□□□□□ -2.08
HMGCS1Q01581 ISCA1P1-201ENST00000426679 387 ntBASIC2.04□□□□□ -2.08
HMGCS1Q01581 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.04□□□□□ -2.08
HMGCS1Q01581 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.04□□□□□ -2.08
HMGCS1Q01581 PGBD4P3-201ENST00000440731 581 ntBASIC2.04□□□□□ -2.08
HMGCS1Q01581 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.04□□□□□ -2.08
HMGCS1Q01581 RPL23AP7-203ENST00000449021 469 ntBASIC2.04□□□□□ -2.08
HMGCS1Q01581 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.04□□□□□ -2.08
HMGCS1Q01581 AL139824.2-201ENST00000458731 1095 ntBASIC2.04□□□□□ -2.08
HMGCS1Q01581 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.04□□□□□ -2.08
HMGCS1Q01581 AP003122.4-201ENST00000530980 758 ntBASIC2.04□□□□□ -2.08
HMGCS1Q01581 SNRPGP18-201ENST00000553000 214 ntBASIC2.04□□□□□ -2.08
HMGCS1Q01581 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.04□□□□□ -2.08
HMGCS1Q01581 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.04□□□□□ -2.08
HMGCS1Q01581 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.04□□□□□ -2.08
HMGCS1Q01581 MIR3915-201ENST00000578518 97 ntBASIC2.04□□□□□ -2.08
HMGCS1Q01581 MIR548AB-201ENST00000584917 84 ntBASIC2.04□□□□□ -2.08
HMGCS1Q01581 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
HMGCS1Q01581 AL358072.1-201ENST00000604156 575 ntBASIC2.04□□□□□ -2.08
HMGCS1Q01581 AC025594.3-201ENST00000613068 790 ntBASIC2.04□□□□□ -2.08
HMGCS1Q01581 AL449363.1-201ENST00000617815 186 ntBASIC2.04□□□□□ -2.08
HMGCS1Q01581 AC092140.2-201ENST00000618027 521 ntBASIC2.04□□□□□ -2.08
HMGCS1Q01581 AL589994.2-201ENST00000621124 579 ntBASIC2.04□□□□□ -2.08
HMGCS1Q01581 AP000770.2-201ENST00000623694 100 ntBASIC2.04□□□□□ -2.08
HMGCS1Q01581 AC007494.3-201ENST00000624660 743 ntBASIC2.04□□□□□ -2.08
HMGCS1Q01581 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.04□□□□□ -2.08
HMGCS1Q01581 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.04□□□□□ -2.08
HMGCS1Q01581 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.03□□□□□ -2.08
HMGCS1Q01581 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
HMGCS1Q01581 RNU4-1-201ENST00000363925 141 ntBASIC2.03□□□□□ -2.08
HMGCS1Q01581 RNU5E-6P-201ENST00000365574 115 ntBASIC2.03□□□□□ -2.08
HMGCS1Q01581 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
HMGCS1Q01581 RNU6-220P-201ENST00000390919 107 ntBASIC2.03□□□□□ -2.08
HMGCS1Q01581 FCF1P10-201ENST00000407590 479 ntBASIC2.03□□□□□ -2.08
HMGCS1Q01581 RNA5SP425-201ENST00000410336 112 ntBASIC2.03□□□□□ -2.08
HMGCS1Q01581 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
HMGCS1Q01581 RPL36AP53-201ENST00000432891 316 ntBASIC2.03□□□□□ -2.08
HMGCS1Q01581 RPL7P34-201ENST00000433316 712 ntBASIC2.03□□□□□ -2.08
HMGCS1Q01581 AL445567.1-201ENST00000439121 144 ntBASIC2.03□□□□□ -2.08
HMGCS1Q01581 MTND4P25-201ENST00000441039 533 ntBASIC2.03□□□□□ -2.08
HMGCS1Q01581 AL031659.1-201ENST00000447075 539 ntBASIC2.03□□□□□ -2.08
HMGCS1Q01581 AL021397.1-201ENST00000451806 248 ntBASIC2.03□□□□□ -2.08
HMGCS1Q01581 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.03□□□□□ -2.08
HMGCS1Q01581 RNU6-717P-201ENST00000459076 104 ntBASIC2.03□□□□□ -2.08
HMGCS1Q01581 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.03□□□□□ -2.08
HMGCS1Q01581 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC2.03□□□□□ -2.08
HMGCS1Q01581 AC022447.1-201ENST00000515358 464 ntBASIC2.03□□□□□ -2.08
HMGCS1Q01581 BTF3P12-201ENST00000519620 469 ntBASIC2.03□□□□□ -2.08
HMGCS1Q01581 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.03□□□□□ -2.08
HMGCS1Q01581 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.03□□□□□ -2.08
HMGCS1Q01581 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.03□□□□□ -2.08
HMGCS1Q01581 RPS3AP4-201ENST00000555161 764 ntBASIC2.03□□□□□ -2.08
HMGCS1Q01581 AC026464.5-201ENST00000562497 722 ntBASIC2.03□□□□□ -2.08
HMGCS1Q01581 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.03□□□□□ -2.08
HMGCS1Q01581 MIR5694-201ENST00000581190 76 ntBASIC2.03□□□□□ -2.08
HMGCS1Q01581 HMGN1P30-201ENST00000589286 268 ntBASIC2.03□□□□□ -2.08
HMGCS1Q01581 AL031775.1-201ENST00000607014 887 ntBASIC2.03□□□□□ -2.08
HMGCS1Q01581 MIR6840-201ENST00000611937 71 ntBASIC2.03□□□□□ -2.08
HMGCS1Q01581 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.03□□□□□ -2.08
HMGCS1Q01581 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.03□□□□□ -2.08
HMGCS1Q01581 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
HMGCS1Q01581 ZNF658B-202ENST00000615961 3375 ntBASIC2.03□□□□□ -2.08
HMGCS1Q01581 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
HMGCS1Q01581 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.03□□□□□ -2.08
HMGCS1Q01581 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
HMGCS1Q01581 MTND4P35-201ENST00000604257 1375 ntBASIC2.02□□□□□ -2.09
HMGCS1Q01581 AL596028.1-201ENST00000326971 197 ntBASIC2.02□□□□□ -2.09
HMGCS1Q01581 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
HMGCS1Q01581 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
HMGCS1Q01581 Y_RNA.169-201ENST00000363745 96 ntBASIC2.02□□□□□ -2.09
HMGCS1Q01581 RNU6-188P-201ENST00000364207 107 ntBASIC2.02□□□□□ -2.09
HMGCS1Q01581 SNORA6-201ENST00000384033 151 ntBASIC2.02□□□□□ -2.09
HMGCS1Q01581 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
HMGCS1Q01581 AL021407.1-201ENST00000404531 386 ntBASIC2.02□□□□□ -2.09
HMGCS1Q01581 Z99497.1-201ENST00000421282 135 ntBASIC2.02□□□□□ -2.09
HMGCS1Q01581 AL365203.2-201ENST00000423444 196 ntBASIC2.02□□□□□ -2.09
HMGCS1Q01581 AC007283.2-201ENST00000424739 197 ntBASIC2.02□□□□□ -2.09
HMGCS1Q01581 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.02□□□□□ -2.09
HMGCS1Q01581 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.02□□□□□ -2.09
HMGCS1Q01581 HMGB1P27-201ENST00000431429 603 ntBASIC2.02□□□□□ -2.09
HMGCS1Q01581 UBE2D3P4-201ENST00000441973 436 ntBASIC2.02□□□□□ -2.09
HMGCS1Q01581 OSTCP8-201ENST00000445117 448 ntBASIC2.02□□□□□ -2.09
HMGCS1Q01581 USP9YP12-201ENST00000450481 570 ntBASIC2.02□□□□□ -2.09
HMGCS1Q01581 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.02□□□□□ -2.09
HMGCS1Q01581 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.02□□□□□ -2.09
HMGCS1Q01581 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC2.02□□□□□ -2.09
HMGCS1Q01581 MTND1P3-201ENST00000484956 952 ntBASIC2.02□□□□□ -2.09
HMGCS1Q01581 AC090255.1-201ENST00000495779 349 ntBASIC2.02□□□□□ -2.09
HMGCS1Q01581 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.02□□□□□ -2.09
HMGCS1Q01581 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.02□□□□□ -2.09
HMGCS1Q01581 AC106038.2-201ENST00000520706 568 ntBASIC2.02□□□□□ -2.09
HMGCS1Q01581 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.02□□□□□ -2.09
HMGCS1Q01581 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms