Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.78□□□□□ -2.28
SCN7AQ01118 Y_RNA.433-201ENST00000384089 102 ntBASIC0.78□□□□□ -2.28
SCN7AQ01118 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.78□□□□□ -2.28
SCN7AQ01118 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC0.78□□□□□ -2.28
SCN7AQ01118 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC0.78□□□□□ -2.28
SCN7AQ01118 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC0.78□□□□□ -2.28
SCN7AQ01118 MTND5P15-201ENST00000434246 349 ntBASIC0.78□□□□□ -2.28
SCN7AQ01118 RPL7P29-201ENST00000437151 728 ntBASIC0.78□□□□□ -2.28
SCN7AQ01118 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.78□□□□□ -2.28
SCN7AQ01118 HESX1-202ENST00000473921 757 ntTSL 5 BASIC0.78□□□□□ -2.28
SCN7AQ01118 MTCYBP16-201ENST00000509187 1129 ntBASIC0.78□□□□□ -2.28
SCN7AQ01118 RNU6-496P-201ENST00000516145 99 ntBASIC0.78□□□□□ -2.28
SCN7AQ01118 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC0.78□□□□□ -2.28
SCN7AQ01118 AC006270.3-201ENST00000605967 1036 ntBASIC0.78□□□□□ -2.28
SCN7AQ01118 AC009229.3-201ENST00000608056 282 ntBASIC0.78□□□□□ -2.28
SCN7AQ01118 AC016252.1-201ENST00000609721 474 ntBASIC0.78□□□□□ -2.28
SCN7AQ01118 MIR2909-201ENST00000617113 69 ntBASIC0.78□□□□□ -2.28
SCN7AQ01118 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC0.78□□□□□ -2.28
SCN7AQ01118 RNU6-1083P-201ENST00000384022 107 ntBASIC0.78□□□□□ -2.29
SCN7AQ01118 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC0.78□□□□□ -2.29
SCN7AQ01118 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC0.78□□□□□ -2.29
SCN7AQ01118 AC018630.2-202ENST00000422992 927 ntBASIC0.78□□□□□ -2.29
SCN7AQ01118 FO393419.3-201ENST00000428741 282 ntBASIC0.78□□□□□ -2.29
SCN7AQ01118 AL049734.2-201ENST00000441066 616 ntBASIC0.78□□□□□ -2.29
SCN7AQ01118 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC0.78□□□□□ -2.29
SCN7AQ01118 PTENP1-201ENST00000447117 1215 ntBASIC0.78□□□□□ -2.29
SCN7AQ01118 SUMO1P1-201ENST00000497904 306 ntBASIC0.78□□□□□ -2.29
SCN7AQ01118 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.78□□□□□ -2.29
SCN7AQ01118 RNU6-229P-201ENST00000516614 102 ntBASIC0.78□□□□□ -2.29
SCN7AQ01118 RNA5SP165-201ENST00000517142 115 ntBASIC0.78□□□□□ -2.29
SCN7AQ01118 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC0.78□□□□□ -2.29
SCN7AQ01118 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.78□□□□□ -2.29
SCN7AQ01118 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC0.78□□□□□ -2.29
SCN7AQ01118 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC0.78□□□□□ -2.29
SCN7AQ01118 HMGN2P15-201ENST00000585707 270 ntBASIC0.78□□□□□ -2.29
SCN7AQ01118 HSPE1P19-201ENST00000603327 295 ntBASIC0.78□□□□□ -2.29
SCN7AQ01118 AL161729.4-201ENST00000604650 476 ntBASIC0.78□□□□□ -2.29
SCN7AQ01118 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC0.78□□□□□ -2.29
SCN7AQ01118 MIR5739-201ENST00000619803 80 ntBASIC0.78□□□□□ -2.29
SCN7AQ01118 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC0.77□□□□□ -2.29
SCN7AQ01118 SNORA25.8-201ENST00000364831 128 ntBASIC0.77□□□□□ -2.29
SCN7AQ01118 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
SCN7AQ01118 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.77□□□□□ -2.29
SCN7AQ01118 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.77□□□□□ -2.29
SCN7AQ01118 VPS26AP1-201ENST00000483197 979 ntBASIC0.77□□□□□ -2.29
SCN7AQ01118 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC0.77□□□□□ -2.29
SCN7AQ01118 AC117525.1-201ENST00000515228 503 ntBASIC0.77□□□□□ -2.29
SCN7AQ01118 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC0.77□□□□□ -2.29
SCN7AQ01118 AC023158.1-201ENST00000561632 1025 ntBASIC0.77□□□□□ -2.29
SCN7AQ01118 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC0.77□□□□□ -2.29
SCN7AQ01118 AP003973.1-201ENST00000604639 691 ntBASIC0.77□□□□□ -2.29
SCN7AQ01118 AP000238.1-201ENST00000608759 426 ntBASIC0.77□□□□□ -2.29
SCN7AQ01118 AL136313.1-201ENST00000624804 202 ntBASIC0.77□□□□□ -2.29
SCN7AQ01118 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
SCN7AQ01118 MIR146A-201ENST00000385201 99 ntBASIC0.76□□□□□ -2.29
SCN7AQ01118 CST2P1-201ENST00000425770 87 ntBASIC0.76□□□□□ -2.29
SCN7AQ01118 AC245047.4-201ENST00000433189 144 ntBASIC0.76□□□□□ -2.29
SCN7AQ01118 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.76□□□□□ -2.29
SCN7AQ01118 TAAR7P-201ENST00000436141 242 ntBASIC0.76□□□□□ -2.29
SCN7AQ01118 AC092628.1-201ENST00000436250 252 ntBASIC0.76□□□□□ -2.29
SCN7AQ01118 RPL39P28-201ENST00000465655 155 ntBASIC0.76□□□□□ -2.29
SCN7AQ01118 AL049714.1-201ENST00000466686 347 ntBASIC0.76□□□□□ -2.29
SCN7AQ01118 SNORD116-30-201ENST00000516468 85 ntBASIC0.76□□□□□ -2.29
SCN7AQ01118 AC036111.3-201ENST00000526389 112 ntBASIC0.76□□□□□ -2.29
SCN7AQ01118 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC0.76□□□□□ -2.29
SCN7AQ01118 MIR4422-201ENST00000581938 83 ntBASIC0.76□□□□□ -2.29
SCN7AQ01118 MTCYBP22-201ENST00000603788 447 ntBASIC0.76□□□□□ -2.29
SCN7AQ01118 MTND5P30-201ENST00000452896 1731 ntBASIC0.76□□□□□ -2.29
SCN7AQ01118 HSBP1P2-201ENST00000299671 229 ntBASIC0.75□□□□□ -2.29
SCN7AQ01118 SNORA22-201ENST00000383907 134 ntBASIC0.75□□□□□ -2.29
SCN7AQ01118 RNU6-217P-201ENST00000384164 104 ntBASIC0.75□□□□□ -2.29
SCN7AQ01118 RNU6-441P-201ENST00000384545 106 ntBASIC0.75□□□□□ -2.29
SCN7AQ01118 SNORA22C-201ENST00000384614 134 ntBASIC0.75□□□□□ -2.29
SCN7AQ01118 MIR30A-201ENST00000385092 71 ntBASIC0.75□□□□□ -2.29
SCN7AQ01118 MIR1197-201ENST00000408818 88 ntBASIC0.75□□□□□ -2.29
SCN7AQ01118 USP9YP19-201ENST00000412165 485 ntBASIC0.75□□□□□ -2.29
SCN7AQ01118 USP9YP13-201ENST00000417797 480 ntBASIC0.75□□□□□ -2.29
SCN7AQ01118 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.75□□□□□ -2.29
SCN7AQ01118 RPS27P23-201ENST00000487608 251 ntBASIC0.75□□□□□ -2.29
SCN7AQ01118 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC0.75□□□□□ -2.29
SCN7AQ01118 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC0.75□□□□□ -2.29
SCN7AQ01118 AK3P2-201ENST00000507976 429 ntBASIC0.75□□□□□ -2.29
SCN7AQ01118 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC0.75□□□□□ -2.29
SCN7AQ01118 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.75□□□□□ -2.29
SCN7AQ01118 NAP1L1P1-201ENST00000524793 1063 ntBASIC0.75□□□□□ -2.29
SCN7AQ01118 OR5AK1P-201ENST00000524837 922 ntBASIC0.75□□□□□ -2.29
SCN7AQ01118 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.75□□□□□ -2.29
SCN7AQ01118 OR8K4P-201ENST00000534608 872 ntBASIC0.75□□□□□ -2.29
SCN7AQ01118 DUXAP1-201ENST00000556632 463 ntBASIC0.75□□□□□ -2.29
SCN7AQ01118 AC026271.5-201ENST00000577873 130 ntBASIC0.75□□□□□ -2.29
SCN7AQ01118 AC010900.2-201ENST00000604508 210 ntBASIC0.75□□□□□ -2.29
SCN7AQ01118 uc_338.14-201ENST00000613162 166 ntBASIC0.75□□□□□ -2.29
SCN7AQ01118 AC073308.1-201ENST00000623696 305 ntBASIC0.75□□□□□ -2.29
SCN7AQ01118 AC004808.1-201ENST00000627671 721 ntBASIC0.75□□□□□ -2.29
SCN7AQ01118 OR4G3P-201ENST00000633500 913 ntBASIC0.75□□□□□ -2.29
SCN7AQ01118 MTND5P31-201ENST00000419366 1374 ntBASIC0.75□□□□□ -2.29
SCN7AQ01118 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
SCN7AQ01118 MIR325-201ENST00000385260 98 ntBASIC0.75□□□□□ -2.29
SCN7AQ01118 RPL23AP32-201ENST00000395315 459 ntBASIC0.75□□□□□ -2.29
SCN7AQ01118 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms