Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
YBX1P67809 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
YBX1P67809 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
YBX1P67809 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
YBX1P67809 AP000560.1-201ENST00000624150 1937 ntBASIC4.09□□□□□ -1.75
YBX1P67809 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
YBX1P67809 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
YBX1P67809 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
YBX1P67809 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
YBX1P67809 MIR448-201ENST00000362131 111 ntBASIC4.09□□□□□ -1.75
YBX1P67809 RNU6-595P-201ENST00000363944 107 ntBASIC4.09□□□□□ -1.75
YBX1P67809 Y_RNA.274-201ENST00000364714 101 ntBASIC4.09□□□□□ -1.75
YBX1P67809 MIR215-201ENST00000384858 110 ntBASIC4.09□□□□□ -1.75
YBX1P67809 RNU6-882P-201ENST00000391025 103 ntBASIC4.09□□□□□ -1.75
YBX1P67809 MTCO2P33-201ENST00000402100 465 ntBASIC4.09□□□□□ -1.75
YBX1P67809 AL603910.2-201ENST00000407268 136 ntBASIC4.09□□□□□ -1.75
YBX1P67809 AP000275.1-201ENST00000411943 390 ntBASIC4.09□□□□□ -1.75
YBX1P67809 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.09□□□□□ -1.75
YBX1P67809 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.09□□□□□ -1.75
YBX1P67809 NUTF2P3-201ENST00000448540 384 ntBASIC4.09□□□□□ -1.75
YBX1P67809 RPL23AP81-201ENST00000455252 467 ntBASIC4.09□□□□□ -1.75
YBX1P67809 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.09□□□□□ -1.75
YBX1P67809 AC022493.1-201ENST00000492984 337 ntBASIC4.09□□□□□ -1.75
YBX1P67809 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.09□□□□□ -1.75
YBX1P67809 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.09□□□□□ -1.75
YBX1P67809 MIR892C-201ENST00000516410 77 ntBASIC4.09□□□□□ -1.75
YBX1P67809 DEFB108E-201ENST00000524692 240 ntBASIC4.09□□□□□ -1.75
YBX1P67809 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.09□□□□□ -1.75
YBX1P67809 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.09□□□□□ -1.75
YBX1P67809 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.09□□□□□ -1.75
YBX1P67809 MIR4429-201ENST00000580105 73 ntBASIC4.09□□□□□ -1.75
YBX1P67809 AC034102.8-201ENST00000615146 484 ntBASIC4.09□□□□□ -1.75
YBX1P67809 MIR3653-201ENST00000625572 110 ntBASIC4.09□□□□□ -1.75
YBX1P67809 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.09□□□□□ -1.76
YBX1P67809 MTND5P9-201ENST00000503854 1755 ntBASIC4.09□□□□□ -1.76
YBX1P67809 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
YBX1P67809 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
YBX1P67809 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.76
YBX1P67809 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
YBX1P67809 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
YBX1P67809 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
YBX1P67809 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
YBX1P67809 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
YBX1P67809 MIR335-201ENST00000362173 94 ntBASIC4.08□□□□□ -1.76
YBX1P67809 RNU6-37P-201ENST00000362692 107 ntBASIC4.08□□□□□ -1.76
YBX1P67809 RNU6-11P-201ENST00000364234 107 ntBASIC4.08□□□□□ -1.76
YBX1P67809 RNU6-512P-201ENST00000364438 103 ntBASIC4.08□□□□□ -1.76
YBX1P67809 RNU6-7-201ENST00000364784 107 ntBASIC4.08□□□□□ -1.76
YBX1P67809 Y_RNA.352-201ENST00000365439 102 ntBASIC4.08□□□□□ -1.76
YBX1P67809 RNU6-8-201ENST00000365467 107 ntBASIC4.08□□□□□ -1.76
YBX1P67809 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.08□□□□□ -1.76
YBX1P67809 RNU6-25P-201ENST00000383873 107 ntBASIC4.08□□□□□ -1.76
YBX1P67809 RNU6-1-201ENST00000383898 107 ntBASIC4.08□□□□□ -1.76
YBX1P67809 RNU6-1279P-201ENST00000383917 103 ntBASIC4.08□□□□□ -1.76
YBX1P67809 RNU6-48P-201ENST00000384161 107 ntBASIC4.08□□□□□ -1.76
YBX1P67809 RNU6-36P-201ENST00000384172 107 ntBASIC4.08□□□□□ -1.76
YBX1P67809 RNU6-4P-201ENST00000384205 107 ntBASIC4.08□□□□□ -1.76
YBX1P67809 RNU6-5P-201ENST00000384238 107 ntBASIC4.08□□□□□ -1.76
YBX1P67809 RNU6-3P-201ENST00000384314 107 ntBASIC4.08□□□□□ -1.76
YBX1P67809 RNU6-16P-201ENST00000384385 107 ntBASIC4.08□□□□□ -1.76
YBX1P67809 RNU6-15P-201ENST00000384534 107 ntBASIC4.08□□□□□ -1.76
YBX1P67809 RNU6-2-201ENST00000384627 107 ntBASIC4.08□□□□□ -1.76
YBX1P67809 RNU6-29P-201ENST00000384637 107 ntBASIC4.08□□□□□ -1.76
YBX1P67809 RNU6-9-201ENST00000384776 107 ntBASIC4.08□□□□□ -1.76
YBX1P67809 RNA5SP494-201ENST00000410653 129 ntBASIC4.08□□□□□ -1.76
YBX1P67809 MTATP6P29-201ENST00000415057 132 ntBASIC4.08□□□□□ -1.76
YBX1P67809 AC004552.1-201ENST00000419089 348 ntBASIC4.08□□□□□ -1.76
YBX1P67809 SDAD1P3-201ENST00000427380 333 ntBASIC4.08□□□□□ -1.76
YBX1P67809 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.08□□□□□ -1.76
YBX1P67809 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.08□□□□□ -1.76
YBX1P67809 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
YBX1P67809 HSPD1P21-201ENST00000436541 245 ntBASIC4.08□□□□□ -1.76
YBX1P67809 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.08□□□□□ -1.76
YBX1P67809 snoU13.3-201ENST00000459441 104 ntBASIC4.08□□□□□ -1.76
YBX1P67809 RPS26P3-201ENST00000470205 348 ntBASIC4.08□□□□□ -1.76
YBX1P67809 AC090543.2-201ENST00000483963 348 ntBASIC4.08□□□□□ -1.76
YBX1P67809 AC004057.1-201ENST00000485827 348 ntBASIC4.08□□□□□ -1.76
YBX1P67809 HMGN1P11-201ENST00000508668 303 ntBASIC4.08□□□□□ -1.76
YBX1P67809 APOOP4-201ENST00000513530 597 ntBASIC4.08□□□□□ -1.76
YBX1P67809 RNA5SP73-201ENST00000516744 108 ntBASIC4.08□□□□□ -1.76
YBX1P67809 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.08□□□□□ -1.76
YBX1P67809 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.08□□□□□ -1.76
YBX1P67809 TRAV37-201ENST00000553906 342 ntBASIC4.08□□□□□ -1.76
YBX1P67809 MIR5696-201ENST00000578474 85 ntBASIC4.08□□□□□ -1.76
YBX1P67809 RN7SL600P-201ENST00000581811 299 ntBASIC4.08□□□□□ -1.76
YBX1P67809 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
YBX1P67809 RNU6-6P-201ENST00000606623 107 ntBASIC4.08□□□□□ -1.76
YBX1P67809 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.08□□□□□ -1.76
YBX1P67809 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.08□□□□□ -1.76
YBX1P67809 AC006065.5-201ENST00000623427 349 ntBASIC4.08□□□□□ -1.76
YBX1P67809 AL450472.1-202ENST00000637286 180 ntBASIC4.08□□□□□ -1.76
YBX1P67809 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
YBX1P67809 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
YBX1P67809 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
YBX1P67809 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
YBX1P67809 HSPA8P1-201ENST00000425843 1833 ntBASIC4.07□□□□□ -1.76
YBX1P67809 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
YBX1P67809 RLIMP1-201ENST00000339626 1680 ntBASIC4.07□□□□□ -1.76
YBX1P67809 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.07□□□□□ -1.76
YBX1P67809 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms