Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 RNU6-1164P-201ENST00000364428 107 ntBASIC0.89□□□□□ -2.27
LSM3P62310 SNORA26.9-201ENST00000391322 122 ntBASIC0.89□□□□□ -2.27
LSM3P62310 RPL22P22-201ENST00000395439 379 ntBASIC0.89□□□□□ -2.27
LSM3P62310 RNU2-68P-201ENST00000410878 191 ntBASIC0.89□□□□□ -2.27
LSM3P62310 TAF13P2-201ENST00000416876 286 ntBASIC0.89□□□□□ -2.27
LSM3P62310 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.89□□□□□ -2.27
LSM3P62310 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.89□□□□□ -2.27
LSM3P62310 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC0.89□□□□□ -2.27
LSM3P62310 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC0.89□□□□□ -2.27
LSM3P62310 AC007000.2-201ENST00000442564 487 ntBASIC0.89□□□□□ -2.27
LSM3P62310 RPL39P6-201ENST00000448289 150 ntBASIC0.89□□□□□ -2.27
LSM3P62310 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.89□□□□□ -2.27
LSM3P62310 OR6C5P-201ENST00000452388 923 ntBASIC0.89□□□□□ -2.27
LSM3P62310 MEMO1P3-201ENST00000459811 302 ntBASIC0.89□□□□□ -2.27
LSM3P62310 APOA2-205ENST00000468465 421 ntTSL 2 BASIC0.89□□□□□ -2.27
LSM3P62310 AC139453.3-201ENST00000493276 369 ntBASIC0.89□□□□□ -2.27
LSM3P62310 RNVU1-2-201ENST00000516326 135 ntBASIC0.89□□□□□ -2.27
LSM3P62310 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.89□□□□□ -2.27
LSM3P62310 RRN3P3-201ENST00000549207 578 ntBASIC0.89□□□□□ -2.27
LSM3P62310 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC0.89□□□□□ -2.27
LSM3P62310 AP003485.1-201ENST00000625093 753 ntBASIC0.89□□□□□ -2.27
LSM3P62310 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.89□□□□□ -2.27
LSM3P62310 GS1-279B7.1-204ENST00000641809 378 ntBASIC0.89□□□□□ -2.27
LSM3P62310 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
LSM3P62310 ZNF680P1-201ENST00000436625 1469 ntBASIC0.88□□□□□ -2.27
LSM3P62310 RNU6-637P-201ENST00000384050 107 ntBASIC0.88□□□□□ -2.27
LSM3P62310 AL139397.2-201ENST00000404529 772 ntBASIC0.88□□□□□ -2.27
LSM3P62310 RPL21P90-201ENST00000415692 466 ntBASIC0.88□□□□□ -2.27
LSM3P62310 AL353621.1-201ENST00000418219 243 ntBASIC0.88□□□□□ -2.27
LSM3P62310 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.88□□□□□ -2.27
LSM3P62310 RPS15AP9-201ENST00000439856 381 ntBASIC0.88□□□□□ -2.27
LSM3P62310 AC002542.1-201ENST00000440683 193 ntBASIC0.88□□□□□ -2.27
LSM3P62310 AL022238.1-201ENST00000442557 355 ntBASIC0.88□□□□□ -2.27
LSM3P62310 MTATP6P30-201ENST00000443540 664 ntBASIC0.88□□□□□ -2.27
LSM3P62310 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.88□□□□□ -2.27
LSM3P62310 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC0.88□□□□□ -2.27
LSM3P62310 TRBV12-1-201ENST00000479785 344 ntBASIC0.88□□□□□ -2.27
LSM3P62310 AC132942.1-201ENST00000486753 483 ntBASIC0.88□□□□□ -2.27
LSM3P62310 AC069306.1-201ENST00000507006 843 ntBASIC0.88□□□□□ -2.27
LSM3P62310 AC108043.1-201ENST00000512696 574 ntBASIC0.88□□□□□ -2.27
LSM3P62310 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.88□□□□□ -2.27
LSM3P62310 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.88□□□□□ -2.27
LSM3P62310 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC0.88□□□□□ -2.27
LSM3P62310 MIR4513-201ENST00000581077 86 ntBASIC0.88□□□□□ -2.27
LSM3P62310 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC0.88□□□□□ -2.27
LSM3P62310 AC010900.2-201ENST00000604508 210 ntBASIC0.88□□□□□ -2.27
LSM3P62310 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC0.88□□□□□ -2.27
LSM3P62310 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.88□□□□□ -2.27
LSM3P62310 ICE2P2-201ENST00000483823 2787 ntBASIC0.88□□□□□ -2.27
LSM3P62310 DBF4P1-201ENST00000412976 1892 ntBASIC0.88□□□□□ -2.27
LSM3P62310 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC0.88□□□□□ -2.27
LSM3P62310 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
LSM3P62310 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
LSM3P62310 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
LSM3P62310 Y_RNA.234-201ENST00000364409 97 ntBASIC0.87□□□□□ -2.27
LSM3P62310 MIR29C-201ENST00000385231 88 ntBASIC0.87□□□□□ -2.27
LSM3P62310 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
LSM3P62310 SNORA67.5-201ENST00000391036 107 ntBASIC0.87□□□□□ -2.27
LSM3P62310 TMSB4XP8-201ENST00000402089 135 ntBASIC0.87□□□□□ -2.27
LSM3P62310 AC127391.1-201ENST00000411737 98 ntBASIC0.87□□□□□ -2.27
LSM3P62310 TMSB4XP6-201ENST00000415187 135 ntBASIC0.87□□□□□ -2.27
LSM3P62310 AC007435.1-201ENST00000421086 415 ntBASIC0.87□□□□□ -2.27
LSM3P62310 TMSB4XP1-201ENST00000424567 135 ntBASIC0.87□□□□□ -2.27
LSM3P62310 MTND4LP14-201ENST00000429447 288 ntBASIC0.87□□□□□ -2.27
LSM3P62310 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.87□□□□□ -2.27
LSM3P62310 DYNLT3P2-201ENST00000442517 295 ntBASIC0.87□□□□□ -2.27
LSM3P62310 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC0.87□□□□□ -2.27
LSM3P62310 GTF2IP12-201ENST00000456547 356 ntBASIC0.87□□□□□ -2.27
LSM3P62310 PRELID3BP1-201ENST00000457142 540 ntBASIC0.87□□□□□ -2.27
LSM3P62310 RPL39P28-201ENST00000465655 155 ntBASIC0.87□□□□□ -2.27
LSM3P62310 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.87□□□□□ -2.27
LSM3P62310 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.87□□□□□ -2.27
LSM3P62310 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.87□□□□□ -2.27
LSM3P62310 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC0.87□□□□□ -2.27
LSM3P62310 SNORA31.17-201ENST00000516953 127 ntBASIC0.87□□□□□ -2.27
LSM3P62310 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.87□□□□□ -2.27
LSM3P62310 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC0.87□□□□□ -2.27
LSM3P62310 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.87□□□□□ -2.27
LSM3P62310 MIR4421-201ENST00000578133 69 ntBASIC0.87□□□□□ -2.27
LSM3P62310 MIR8074-201ENST00000615081 81 ntBASIC0.87□□□□□ -2.27
LSM3P62310 AC008121.3-201ENST00000618726 433 ntBASIC0.87□□□□□ -2.27
LSM3P62310 AC091965.5-201ENST00000624785 342 ntBASIC0.87□□□□□ -2.27
LSM3P62310 MIR4275-201ENST00000636486 87 ntBASIC0.87□□□□□ -2.27
LSM3P62310 RBBP8P1-201ENST00000449447 1844 ntBASIC0.87□□□□□ -2.27
LSM3P62310 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
LSM3P62310 SNORD14D-201ENST00000384390 87 ntBASIC0.86□□□□□ -2.27
LSM3P62310 RNU1-78P-201ENST00000391248 165 ntBASIC0.86□□□□□ -2.27
LSM3P62310 PIGPP2-201ENST00000411569 458 ntBASIC0.86□□□□□ -2.27
LSM3P62310 RPL23AP36-201ENST00000413895 458 ntBASIC0.86□□□□□ -2.27
LSM3P62310 LUZP4P1-201ENST00000415420 344 ntBASIC0.86□□□□□ -2.27
LSM3P62310 RPS27P16-201ENST00000425758 201 ntBASIC0.86□□□□□ -2.27
LSM3P62310 AL590623.1-201ENST00000427864 105 ntBASIC0.86□□□□□ -2.27
LSM3P62310 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC0.86□□□□□ -2.27
LSM3P62310 RPL39P29-201ENST00000447779 157 ntBASIC0.86□□□□□ -2.27
LSM3P62310 OFD1P7Y-201ENST00000454643 1155 ntBASIC0.86□□□□□ -2.27
LSM3P62310 DUXAP8-207ENST00000456786 622 ntBASIC0.86□□□□□ -2.27
LSM3P62310 AC008628.1-201ENST00000508663 265 ntBASIC0.86□□□□□ -2.27
LSM3P62310 RNU6-703P-201ENST00000516946 107 ntBASIC0.86□□□□□ -2.27
LSM3P62310 ACA59.2-201ENST00000517061 156 ntBASIC0.86□□□□□ -2.27
LSM3P62310 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms