Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.32□□□□□ -1.72
ERVFC1P60507 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.32□□□□□ -1.72
ERVFC1P60507 MIR5696-201ENST00000578474 85 ntBASIC4.32□□□□□ -1.72
ERVFC1P60507 MIR5684-201ENST00000585074 65 ntBASIC4.32□□□□□ -1.72
ERVFC1P60507 MIR1244-1-201ENST00000612829 85 ntBASIC4.32□□□□□ -1.72
ERVFC1P60507 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.32□□□□□ -1.72
ERVFC1P60507 MIR1244-3-201ENST00000635744 85 ntBASIC4.32□□□□□ -1.72
ERVFC1P60507 MIR1244-2-201ENST00000636449 85 ntBASIC4.32□□□□□ -1.72
ERVFC1P60507 MIR1244-4-202ENST00000636813 85 ntBASIC4.32□□□□□ -1.72
ERVFC1P60507 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ERVFC1P60507 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ERVFC1P60507 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.32□□□□□ -1.72
ERVFC1P60507 ZNF285B-201ENST00000561698 1767 ntBASIC4.32□□□□□ -1.72
ERVFC1P60507 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.32□□□□□ -1.72
ERVFC1P60507 MAPK10-303ENST00000641324 3959 ntBASIC4.31□□□□□ -1.72
ERVFC1P60507 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.31□□□□□ -1.72
ERVFC1P60507 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
ERVFC1P60507 AL161912.2-201ENST00000565707 3007 ntBASIC4.31□□□□□ -1.72
ERVFC1P60507 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
ERVFC1P60507 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ERVFC1P60507 ZNF299P-201ENST00000406845 1804 ntBASIC4.31□□□□□ -1.72
ERVFC1P60507 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
ERVFC1P60507 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ERVFC1P60507 Y_RNA.274-201ENST00000364714 101 ntBASIC4.31□□□□□ -1.72
ERVFC1P60507 Y_RNA.297-201ENST00000364950 91 ntBASIC4.31□□□□□ -1.72
ERVFC1P60507 U3.15-201ENST00000365398 212 ntBASIC4.31□□□□□ -1.72
ERVFC1P60507 U8.11-201ENST00000384699 133 ntBASIC4.31□□□□□ -1.72
ERVFC1P60507 U8.12-201ENST00000384701 133 ntBASIC4.31□□□□□ -1.72
ERVFC1P60507 MIR578-201ENST00000384828 96 ntBASIC4.31□□□□□ -1.72
ERVFC1P60507 SNORA69.1-201ENST00000390904 137 ntBASIC4.31□□□□□ -1.72
ERVFC1P60507 PCNPP3-201ENST00000393579 471 ntBASIC4.31□□□□□ -1.72
ERVFC1P60507 AL513475.1-201ENST00000406602 315 ntBASIC4.31□□□□□ -1.72
ERVFC1P60507 SNORA57.3-201ENST00000411095 141 ntBASIC4.31□□□□□ -1.72
ERVFC1P60507 AL160275.2-201ENST00000412010 394 ntBASIC4.31□□□□□ -1.72
ERVFC1P60507 AL139156.1-201ENST00000412785 841 ntBASIC4.31□□□□□ -1.72
ERVFC1P60507 RPS12P23-201ENST00000419579 400 ntBASIC4.31□□□□□ -1.72
ERVFC1P60507 AC007098.1-201ENST00000420122 367 ntBASIC4.31□□□□□ -1.72
ERVFC1P60507 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.31□□□□□ -1.72
ERVFC1P60507 AC096920.1-201ENST00000423991 241 ntBASIC4.31□□□□□ -1.72
ERVFC1P60507 AL645939.1-201ENST00000453429 797 ntBASIC4.31□□□□□ -1.72
ERVFC1P60507 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.31□□□□□ -1.72
ERVFC1P60507 U8.18-201ENST00000459285 133 ntBASIC4.31□□□□□ -1.72
ERVFC1P60507 AC108022.1-201ENST00000493466 478 ntBASIC4.31□□□□□ -1.72
ERVFC1P60507 RNU6-914P-201ENST00000516749 109 ntBASIC4.31□□□□□ -1.72
ERVFC1P60507 TRAV32-201ENST00000553993 340 ntBASIC4.31□□□□□ -1.72
ERVFC1P60507 AL158827.2-201ENST00000602494 330 ntBASIC4.31□□□□□ -1.72
ERVFC1P60507 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC4.31□□□□□ -1.72
ERVFC1P60507 AL691447.3-201ENST00000635020 330 ntBASIC4.31□□□□□ -1.72
ERVFC1P60507 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.31□□□□□ -1.72
ERVFC1P60507 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.31□□□□□ -1.72
ERVFC1P60507 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
ERVFC1P60507 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.31□□□□□ -1.72
ERVFC1P60507 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ERVFC1P60507 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ERVFC1P60507 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.3□□□□□ -1.72
ERVFC1P60507 AL391987.6-201ENST00000305671 199 ntBASIC4.3□□□□□ -1.72
ERVFC1P60507 SNORA60-201ENST00000362396 134 ntBASIC4.3□□□□□ -1.72
ERVFC1P60507 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.3□□□□□ -1.72
ERVFC1P60507 AC008065.1-201ENST00000428525 348 ntBASIC4.3□□□□□ -1.72
ERVFC1P60507 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.3□□□□□ -1.72
ERVFC1P60507 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.3□□□□□ -1.72
ERVFC1P60507 PRDX3P3-201ENST00000447765 522 ntBASIC4.3□□□□□ -1.72
ERVFC1P60507 AL139109.1-201ENST00000455491 297 ntBASIC4.3□□□□□ -1.72
ERVFC1P60507 AC108145.1-201ENST00000503770 153 ntBASIC4.3□□□□□ -1.72
ERVFC1P60507 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.3□□□□□ -1.72
ERVFC1P60507 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.3□□□□□ -1.72
ERVFC1P60507 AC008716.1-201ENST00000511084 513 ntBASIC4.3□□□□□ -1.72
ERVFC1P60507 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.3□□□□□ -1.72
ERVFC1P60507 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.3□□□□□ -1.72
ERVFC1P60507 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.3□□□□□ -1.72
ERVFC1P60507 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.3□□□□□ -1.72
ERVFC1P60507 MIR548AC-201ENST00000585049 88 ntBASIC4.3□□□□□ -1.72
ERVFC1P60507 AC010900.2-201ENST00000604508 210 ntBASIC4.3□□□□□ -1.72
ERVFC1P60507 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.3□□□□□ -1.72
ERVFC1P60507 MIR4496-201ENST00000635896 61 ntBASIC4.3□□□□□ -1.72
ERVFC1P60507 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.3□□□□□ -1.72
ERVFC1P60507 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
ERVFC1P60507 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ERVFC1P60507 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
ERVFC1P60507 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
ERVFC1P60507 PRO1804-201ENST00000623780 2050 ntBASIC4.3□□□□□ -1.72
ERVFC1P60507 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.29□□□□□ -1.72
ERVFC1P60507 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
ERVFC1P60507 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.29□□□□□ -1.72
ERVFC1P60507 AP000560.1-201ENST00000624150 1937 ntBASIC4.29□□□□□ -1.72
ERVFC1P60507 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ERVFC1P60507 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ERVFC1P60507 SNORD81.1-201ENST00000363064 77 ntBASIC4.29□□□□□ -1.72
ERVFC1P60507 RNU6-595P-201ENST00000363944 107 ntBASIC4.29□□□□□ -1.72
ERVFC1P60507 Y_RNA.237-201ENST00000364439 102 ntBASIC4.29□□□□□ -1.72
ERVFC1P60507 Y_RNA.324-201ENST00000365165 102 ntBASIC4.29□□□□□ -1.72
ERVFC1P60507 SNORD113-1-201ENST00000365321 69 ntBASIC4.29□□□□□ -1.72
ERVFC1P60507 RNU6-933P-201ENST00000384424 107 ntBASIC4.29□□□□□ -1.72
ERVFC1P60507 Y_RNA.533-201ENST00000384596 114 ntBASIC4.29□□□□□ -1.72
ERVFC1P60507 MIR628-201ENST00000385229 95 ntBASIC4.29□□□□□ -1.72
ERVFC1P60507 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
ERVFC1P60507 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
ERVFC1P60507 MIR1250-201ENST00000408098 113 ntBASIC4.29□□□□□ -1.72
ERVFC1P60507 Y_RNA.592-201ENST00000410274 109 ntBASIC4.29□□□□□ -1.72
ERVFC1P60507 RNU2-33P-201ENST00000410344 192 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms