Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.39□□□□□ -1.71
RTP1P59025 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
RTP1P59025 SNORD14.1-201ENST00000365609 90 ntBASIC4.39□□□□□ -1.71
RTP1P59025 RNU6-472P-201ENST00000384299 107 ntBASIC4.39□□□□□ -1.71
RTP1P59025 RNU6-817P-201ENST00000391083 104 ntBASIC4.39□□□□□ -1.71
RTP1P59025 RPL21P1-201ENST00000399532 476 ntBASIC4.39□□□□□ -1.71
RTP1P59025 RNU2-43P-201ENST00000410306 190 ntBASIC4.39□□□□□ -1.71
RTP1P59025 RPL21P90-201ENST00000415692 466 ntBASIC4.39□□□□□ -1.71
RTP1P59025 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.39□□□□□ -1.71
RTP1P59025 BX276092.3-201ENST00000424182 230 ntBASIC4.39□□□□□ -1.71
RTP1P59025 AL138785.1-201ENST00000425821 331 ntBASIC4.39□□□□□ -1.71
RTP1P59025 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RTP1P59025 CHEK2P4-201ENST00000450340 246 ntBASIC4.39□□□□□ -1.71
RTP1P59025 SUMO1P2-201ENST00000452524 304 ntBASIC4.39□□□□□ -1.71
RTP1P59025 RNU6-953P-201ENST00000459154 107 ntBASIC4.39□□□□□ -1.71
RTP1P59025 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.39□□□□□ -1.71
RTP1P59025 Y_RNA.715-201ENST00000517082 110 ntBASIC4.39□□□□□ -1.71
RTP1P59025 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC4.39□□□□□ -1.71
RTP1P59025 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
RTP1P59025 AC067852.4-201ENST00000590314 478 ntBASIC4.39□□□□□ -1.71
RTP1P59025 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC4.39□□□□□ -1.71
RTP1P59025 HMGB1P50-201ENST00000605814 607 ntBASIC4.39□□□□□ -1.71
RTP1P59025 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RTP1P59025 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.39□□□□□ -1.71
RTP1P59025 MTND5P7-201ENST00000413558 1798 ntBASIC4.39□□□□□ -1.71
RTP1P59025 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RTP1P59025 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.38□□□□□ -1.71
RTP1P59025 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RTP1P59025 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
RTP1P59025 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
RTP1P59025 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RTP1P59025 RNU4-70P-201ENST00000384579 139 ntBASIC4.38□□□□□ -1.71
RTP1P59025 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RTP1P59025 RNU6-712P-201ENST00000410558 100 ntBASIC4.38□□□□□ -1.71
RTP1P59025 AL356968.1-201ENST00000416622 474 ntBASIC4.38□□□□□ -1.71
RTP1P59025 BX842559.1-201ENST00000419615 532 ntBASIC4.38□□□□□ -1.71
RTP1P59025 AL591419.1-201ENST00000427423 339 ntBASIC4.38□□□□□ -1.71
RTP1P59025 HMGB1P9-201ENST00000429856 646 ntBASIC4.38□□□□□ -1.71
RTP1P59025 ARL5AP4-201ENST00000430731 512 ntBASIC4.38□□□□□ -1.71
RTP1P59025 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.38□□□□□ -1.71
RTP1P59025 SUMO1P3-201ENST00000439961 304 ntBASIC4.38□□□□□ -1.71
RTP1P59025 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.38□□□□□ -1.71
RTP1P59025 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.38□□□□□ -1.71
RTP1P59025 AL133162.1-201ENST00000463228 453 ntBASIC4.38□□□□□ -1.71
RTP1P59025 RNU2-53P-201ENST00000516257 147 ntBASIC4.38□□□□□ -1.71
RTP1P59025 SCARNA14-201ENST00000516903 136 ntBASIC4.38□□□□□ -1.71
RTP1P59025 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.38□□□□□ -1.71
RTP1P59025 AC087369.1-201ENST00000520775 996 ntBASIC4.38□□□□□ -1.71
RTP1P59025 AC023157.2-201ENST00000540596 141 ntBASIC4.38□□□□□ -1.71
RTP1P59025 AC107016.1-201ENST00000550463 337 ntBASIC4.38□□□□□ -1.71
RTP1P59025 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.38□□□□□ -1.71
RTP1P59025 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.38□□□□□ -1.71
RTP1P59025 AC125232.2-201ENST00000592457 143 ntBASIC4.38□□□□□ -1.71
RTP1P59025 RNU6-85P-201ENST00000605989 107 ntBASIC4.38□□□□□ -1.71
RTP1P59025 MIR4272-201ENST00000635924 64 ntBASIC4.38□□□□□ -1.71
RTP1P59025 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
RTP1P59025 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
RTP1P59025 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
RTP1P59025 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RTP1P59025 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
RTP1P59025 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
RTP1P59025 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.37□□□□□ -1.71
RTP1P59025 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
RTP1P59025 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RTP1P59025 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
RTP1P59025 AC018555.1-201ENST00000567548 1980 ntBASIC4.37□□□□□ -1.71
RTP1P59025 RNU6-1249P-201ENST00000363237 111 ntBASIC4.37□□□□□ -1.71
RTP1P59025 Y_RNA.288-201ENST00000364854 92 ntBASIC4.37□□□□□ -1.71
RTP1P59025 U1.1-201ENST00000384101 164 ntBASIC4.37□□□□□ -1.71
RTP1P59025 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
RTP1P59025 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RTP1P59025 RPL23AP48-201ENST00000406913 488 ntBASIC4.37□□□□□ -1.71
RTP1P59025 RPL7AP73-201ENST00000413490 353 ntBASIC4.37□□□□□ -1.71
RTP1P59025 AL139247.1-201ENST00000422768 325 ntBASIC4.37□□□□□ -1.71
RTP1P59025 AL133396.1-201ENST00000432048 687 ntBASIC4.37□□□□□ -1.71
RTP1P59025 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.37□□□□□ -1.71
RTP1P59025 CYCSP35-201ENST00000451978 304 ntBASIC4.37□□□□□ -1.71
RTP1P59025 RPS24P6-201ENST00000452670 400 ntBASIC4.37□□□□□ -1.71
RTP1P59025 PCMTD1P1-201ENST00000455560 355 ntBASIC4.37□□□□□ -1.71
RTP1P59025 snoU13.3-201ENST00000459441 104 ntBASIC4.37□□□□□ -1.71
RTP1P59025 AC008571.1-201ENST00000467232 300 ntBASIC4.37□□□□□ -1.71
RTP1P59025 AC011005.2-201ENST00000487324 359 ntBASIC4.37□□□□□ -1.71
RTP1P59025 RPL17P19-201ENST00000489069 552 ntBASIC4.37□□□□□ -1.71
RTP1P59025 AC018437.1-201ENST00000492214 406 ntBASIC4.37□□□□□ -1.71
RTP1P59025 RPL31P61-201ENST00000496160 376 ntBASIC4.37□□□□□ -1.71
RTP1P59025 MTND3P25-201ENST00000509243 135 ntBASIC4.37□□□□□ -1.71
RTP1P59025 Y_RNA.680-201ENST00000516441 93 ntBASIC4.37□□□□□ -1.71
RTP1P59025 AC069113.1-201ENST00000517763 267 ntBASIC4.37□□□□□ -1.71
RTP1P59025 AC008489.1-201ENST00000524271 483 ntBASIC4.37□□□□□ -1.71
RTP1P59025 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.37□□□□□ -1.71
RTP1P59025 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.37□□□□□ -1.71
RTP1P59025 AC126177.3-201ENST00000551839 688 ntBASIC4.37□□□□□ -1.71
RTP1P59025 AC026470.2-201ENST00000561492 181 ntBASIC4.37□□□□□ -1.71
RTP1P59025 AC016727.2-201ENST00000603988 621 ntBASIC4.37□□□□□ -1.71
RTP1P59025 HMGN2P28-201ENST00000606102 262 ntBASIC4.37□□□□□ -1.71
RTP1P59025 AL365434.2-201ENST00000607979 234 ntBASIC4.37□□□□□ -1.71
RTP1P59025 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RTP1P59025 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.37□□□□□ -1.71
RTP1P59025 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RTP1P59025 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 139.8 ms