Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AL355472.4-201ENST00000610233 626 ntBASIC2.05□□□□□ -2.08
CDH6P55285 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.05□□□□□ -2.08
CDH6P55285 AL162373.1-201ENST00000620433 407 ntBASIC2.05□□□□□ -2.08
CDH6P55285 AC098657.3-201ENST00000620434 263 ntBASIC2.05□□□□□ -2.08
CDH6P55285 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.05□□□□□ -2.08
CDH6P55285 TEX21P-201ENST00000447107 1476 ntBASIC2.05□□□□□ -2.08
CDH6P55285 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CDH6P55285 RNY4P24-201ENST00000362735 96 ntBASIC2.04□□□□□ -2.08
CDH6P55285 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CDH6P55285 RNU6-253P-201ENST00000384730 105 ntBASIC2.04□□□□□ -2.08
CDH6P55285 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.04□□□□□ -2.08
CDH6P55285 RNU2-2P-201ENST00000410396 191 ntBASIC2.04□□□□□ -2.08
CDH6P55285 HMGB3P2-201ENST00000411913 584 ntBASIC2.04□□□□□ -2.08
CDH6P55285 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.04□□□□□ -2.08
CDH6P55285 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.04□□□□□ -2.08
CDH6P55285 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.04□□□□□ -2.08
CDH6P55285 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.04□□□□□ -2.08
CDH6P55285 AL592045.1-201ENST00000429867 352 ntBASIC2.04□□□□□ -2.08
CDH6P55285 AC084290.1-201ENST00000434995 374 ntBASIC2.04□□□□□ -2.08
CDH6P55285 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC2.04□□□□□ -2.08
CDH6P55285 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.04□□□□□ -2.08
CDH6P55285 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CDH6P55285 AC004854.1-201ENST00000440356 349 ntBASIC2.04□□□□□ -2.08
CDH6P55285 MTND4P25-201ENST00000441039 533 ntBASIC2.04□□□□□ -2.08
CDH6P55285 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CDH6P55285 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.04□□□□□ -2.08
CDH6P55285 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.04□□□□□ -2.08
CDH6P55285 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.04□□□□□ -2.08
CDH6P55285 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.04□□□□□ -2.08
CDH6P55285 RNU6-953P-201ENST00000459154 107 ntBASIC2.04□□□□□ -2.08
CDH6P55285 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.04□□□□□ -2.08
CDH6P55285 AC104685.1-201ENST00000502445 371 ntBASIC2.04□□□□□ -2.08
CDH6P55285 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.04□□□□□ -2.08
CDH6P55285 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.04□□□□□ -2.08
CDH6P55285 SMURF2P1-201ENST00000514992 481 ntBASIC2.04□□□□□ -2.08
CDH6P55285 MTATP6P9-201ENST00000515039 680 ntBASIC2.04□□□□□ -2.08
CDH6P55285 FAM92A1P1-201ENST00000528023 890 ntBASIC2.04□□□□□ -2.08
CDH6P55285 CENPCP1-201ENST00000533085 2578 ntBASIC2.04□□□□□ -2.08
CDH6P55285 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.04□□□□□ -2.08
CDH6P55285 AL358072.1-201ENST00000604156 575 ntBASIC2.04□□□□□ -2.08
CDH6P55285 U2.15-201ENST00000611544 191 ntBASIC2.04□□□□□ -2.08
CDH6P55285 U2.16-201ENST00000613119 191 ntBASIC2.04□□□□□ -2.08
CDH6P55285 U2.12-201ENST00000613778 191 ntBASIC2.04□□□□□ -2.08
CDH6P55285 U2.20-201ENST00000613956 192 ntBASIC2.04□□□□□ -2.08
CDH6P55285 U2.9-201ENST00000615427 191 ntBASIC2.04□□□□□ -2.08
CDH6P55285 U2.11-201ENST00000616345 191 ntBASIC2.04□□□□□ -2.08
CDH6P55285 U2.2-201ENST00000616535 191 ntBASIC2.04□□□□□ -2.08
CDH6P55285 U2.3-201ENST00000617785 191 ntBASIC2.04□□□□□ -2.08
CDH6P55285 U2.19-201ENST00000618602 191 ntBASIC2.04□□□□□ -2.08
CDH6P55285 RNU2-1-201ENST00000618664 191 ntBASIC2.04□□□□□ -2.08
CDH6P55285 U2.6-201ENST00000619225 191 ntBASIC2.04□□□□□ -2.08
CDH6P55285 U2.5-201ENST00000619465 191 ntBASIC2.04□□□□□ -2.08
CDH6P55285 MIR5739-201ENST00000619803 80 ntBASIC2.04□□□□□ -2.08
CDH6P55285 U2.10-201ENST00000620268 191 ntBASIC2.04□□□□□ -2.08
CDH6P55285 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC2.04□□□□□ -2.08
CDH6P55285 AC103706.2-201ENST00000638080 240 ntBASIC2.04□□□□□ -2.08
CDH6P55285 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
CDH6P55285 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
CDH6P55285 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.03□□□□□ -2.08
CDH6P55285 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.03□□□□□ -2.08
CDH6P55285 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.03□□□□□ -2.08
CDH6P55285 RNU6-1280P-201ENST00000365211 107 ntBASIC2.03□□□□□ -2.08
CDH6P55285 RNA5SP88-201ENST00000365560 109 ntBASIC2.03□□□□□ -2.08
CDH6P55285 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
CDH6P55285 OR51A5P-201ENST00000415429 942 ntBASIC2.03□□□□□ -2.08
CDH6P55285 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.03□□□□□ -2.08
CDH6P55285 SRIP2-201ENST00000428470 166 ntBASIC2.03□□□□□ -2.08
CDH6P55285 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.03□□□□□ -2.08
CDH6P55285 RPL7P12-201ENST00000446719 750 ntBASIC2.03□□□□□ -2.08
CDH6P55285 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.03□□□□□ -2.08
CDH6P55285 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.03□□□□□ -2.08
CDH6P55285 MTAPP1-201ENST00000489154 819 ntBASIC2.03□□□□□ -2.08
CDH6P55285 RPS29P21-201ENST00000496272 170 ntBASIC2.03□□□□□ -2.08
CDH6P55285 AC119751.4-201ENST00000507498 357 ntBASIC2.03□□□□□ -2.08
CDH6P55285 AC116655.1-201ENST00000508324 901 ntBASIC2.03□□□□□ -2.08
CDH6P55285 AC105185.1-201ENST00000518705 535 ntBASIC2.03□□□□□ -2.08
CDH6P55285 AC025755.1-201ENST00000521306 278 ntBASIC2.03□□□□□ -2.08
CDH6P55285 AC084851.1-201ENST00000529105 249 ntBASIC2.03□□□□□ -2.08
CDH6P55285 DUXAP1-201ENST00000556632 463 ntBASIC2.03□□□□□ -2.08
CDH6P55285 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.03□□□□□ -2.08
CDH6P55285 AC008749.1-201ENST00000597650 306 ntBASIC2.03□□□□□ -2.08
CDH6P55285 KC877982.1-201ENST00000602313 470 ntBASIC2.03□□□□□ -2.08
CDH6P55285 AL670379.6-201ENST00000603753 252 ntBASIC2.03□□□□□ -2.08
CDH6P55285 AL670379.11-201ENST00000604059 253 ntBASIC2.03□□□□□ -2.08
CDH6P55285 APOOP1-201ENST00000604695 592 ntBASIC2.03□□□□□ -2.08
CDH6P55285 AC008162.1-201ENST00000604718 254 ntBASIC2.03□□□□□ -2.08
CDH6P55285 AL670379.1-201ENST00000604752 252 ntBASIC2.03□□□□□ -2.08
CDH6P55285 AL670379.5-201ENST00000605253 252 ntBASIC2.03□□□□□ -2.08
CDH6P55285 AL670379.12-201ENST00000605291 253 ntBASIC2.03□□□□□ -2.08
CDH6P55285 AL670379.8-201ENST00000605353 252 ntBASIC2.03□□□□□ -2.08
CDH6P55285 AL670379.7-201ENST00000605823 252 ntBASIC2.03□□□□□ -2.08
CDH6P55285 AL139418.1-201ENST00000613613 177 ntBASIC2.03□□□□□ -2.08
CDH6P55285 AC009233.1-201ENST00000616477 371 ntBASIC2.03□□□□□ -2.08
CDH6P55285 SDR42E1P4-201ENST00000620894 481 ntBASIC2.03□□□□□ -2.08
CDH6P55285 YWHAEP7-203ENST00000622054 312 ntBASIC2.03□□□□□ -2.08
CDH6P55285 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC2.03□□□□□ -2.08
CDH6P55285 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CDH6P55285 AC009487.4-201ENST00000624969 3585 ntBASIC2.03□□□□□ -2.09
CDH6P55285 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CDH6P55285 AC106754.1-201ENST00000562632 1513 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms