Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 RNU2-62P-201ENST00000410868 191 ntBASIC2.57□□□□□ -2
HMGCS2P54868 MORF4L1P6-201ENST00000418771 268 ntBASIC2.57□□□□□ -2
HMGCS2P54868 AL451054.2-201ENST00000420896 202 ntBASIC2.57□□□□□ -2
HMGCS2P54868 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.57□□□□□ -2
HMGCS2P54868 ISCA1P6-201ENST00000427740 390 ntBASIC2.57□□□□□ -2
HMGCS2P54868 USP9YP14-201ENST00000430663 563 ntBASIC2.57□□□□□ -2
HMGCS2P54868 USP12PX-201ENST00000432383 1057 ntBASIC2.57□□□□□ -2
HMGCS2P54868 USP9YP15-201ENST00000442391 422 ntBASIC2.57□□□□□ -2
HMGCS2P54868 AC009237.8-201ENST00000445492 379 ntBASIC2.57□□□□□ -2
HMGCS2P54868 UBBP3-201ENST00000445497 241 ntBASIC2.57□□□□□ -2
HMGCS2P54868 AC020550.1-201ENST00000447385 163 ntBASIC2.57□□□□□ -2
HMGCS2P54868 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.57□□□□□ -2
HMGCS2P54868 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.57□□□□□ -2
HMGCS2P54868 TPTE2P5-203ENST00000458118 728 ntBASIC2.57□□□□□ -2
HMGCS2P54868 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.57□□□□□ -2
HMGCS2P54868 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.57□□□□□ -2
HMGCS2P54868 AC116337.1-201ENST00000509680 687 ntBASIC2.57□□□□□ -2
HMGCS2P54868 MTND3P5-201ENST00000512798 333 ntBASIC2.57□□□□□ -2
HMGCS2P54868 RNU6-1220P-201ENST00000517126 108 ntBASIC2.57□□□□□ -2
HMGCS2P54868 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.57□□□□□ -2
HMGCS2P54868 AC022616.3-201ENST00000523940 148 ntBASIC2.57□□□□□ -2
HMGCS2P54868 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.57□□□□□ -2
HMGCS2P54868 AC137800.2-201ENST00000574375 120 ntBASIC2.57□□□□□ -2
HMGCS2P54868 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.57□□□□□ -2
HMGCS2P54868 AC008739.2-201ENST00000597006 317 ntBASIC2.57□□□□□ -2
HMGCS2P54868 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.57□□□□□ -2
HMGCS2P54868 AC011939.3-201ENST00000613686 466 ntBASIC2.57□□□□□ -2
HMGCS2P54868 SDR42E1P2-201ENST00000614861 481 ntBASIC2.57□□□□□ -2
HMGCS2P54868 AC073308.1-201ENST00000623696 305 ntBASIC2.57□□□□□ -2
HMGCS2P54868 MIR219B-201ENST00000637023 88 ntBASIC2.57□□□□□ -2
HMGCS2P54868 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
HMGCS2P54868 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
HMGCS2P54868 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
HMGCS2P54868 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
HMGCS2P54868 RNU6-1284P-201ENST00000363701 100 ntBASIC2.56□□□□□ -2
HMGCS2P54868 OR5H15-201ENST00000383696 930 ntBASIC2.56□□□□□ -2
HMGCS2P54868 RPL21P75-201ENST00000396599 483 ntBASIC2.56□□□□□ -2
HMGCS2P54868 RPL21P28-201ENST00000401418 483 ntBASIC2.56□□□□□ -2
HMGCS2P54868 MRPL42P2-201ENST00000403169 426 ntBASIC2.56□□□□□ -2
HMGCS2P54868 AL592114.1-201ENST00000403842 483 ntBASIC2.56□□□□□ -2
HMGCS2P54868 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.56□□□□□ -2
HMGCS2P54868 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.56□□□□□ -2
HMGCS2P54868 Z85995.1-201ENST00000415547 335 ntBASIC2.56□□□□□ -2
HMGCS2P54868 MTND3P17-201ENST00000416968 344 ntBASIC2.56□□□□□ -2
HMGCS2P54868 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.56□□□□□ -2
HMGCS2P54868 MTND1P27-201ENST00000451117 902 ntBASIC2.56□□□□□ -2
HMGCS2P54868 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.56□□□□□ -2
HMGCS2P54868 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.56□□□□□ -2
HMGCS2P54868 snoU13.28-201ENST00000459235 104 ntBASIC2.56□□□□□ -2
HMGCS2P54868 RPS20P20-201ENST00000460498 340 ntBASIC2.56□□□□□ -2
HMGCS2P54868 RPL21P39-201ENST00000463605 483 ntBASIC2.56□□□□□ -2
HMGCS2P54868 MTCO2P29-201ENST00000465212 189 ntBASIC2.56□□□□□ -2
HMGCS2P54868 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.56□□□□□ -2
HMGCS2P54868 RPL21P93-201ENST00000480465 489 ntBASIC2.56□□□□□ -2
HMGCS2P54868 RN7SL499P-201ENST00000481141 276 ntBASIC2.56□□□□□ -2
HMGCS2P54868 AC233702.1-201ENST00000482905 502 ntBASIC2.56□□□□□ -2
HMGCS2P54868 AC087190.1-201ENST00000484462 480 ntBASIC2.56□□□□□ -2
HMGCS2P54868 AC093591.1-201ENST00000491435 481 ntBASIC2.56□□□□□ -2
HMGCS2P54868 RPL21P16-201ENST00000495531 483 ntBASIC2.56□□□□□ -2
HMGCS2P54868 AC107222.1-201ENST00000510899 637 ntBASIC2.56□□□□□ -2
HMGCS2P54868 TTC39CP1-201ENST00000512513 755 ntBASIC2.56□□□□□ -2
HMGCS2P54868 RNU6-840P-201ENST00000517275 65 ntBASIC2.56□□□□□ -2
HMGCS2P54868 AC135279.1-201ENST00000543493 504 ntBASIC2.56□□□□□ -2
HMGCS2P54868 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.56□□□□□ -2
HMGCS2P54868 AC012213.3-201ENST00000577199 777 ntBASIC2.56□□□□□ -2
HMGCS2P54868 AC103710.1-201ENST00000610003 901 ntBASIC2.56□□□□□ -2
HMGCS2P54868 AC009318.2-201ENST00000610917 651 ntBASIC2.56□□□□□ -2
HMGCS2P54868 AC069234.5-201ENST00000611056 416 ntBASIC2.56□□□□□ -2
HMGCS2P54868 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.56□□□□□ -2
HMGCS2P54868 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.56□□□□□ -2
HMGCS2P54868 AC068137.4-201ENST00000638485 296 ntBASIC2.56□□□□□ -2
HMGCS2P54868 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.56□□□□□ -2
HMGCS2P54868 OR5H6-203ENST00000642105 978 ntBASIC2.56□□□□□ -2
HMGCS2P54868 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
HMGCS2P54868 AC026241.1-201ENST00000517873 2142 ntBASIC2.56□□□□□ -2
HMGCS2P54868 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.56□□□□□ -2
HMGCS2P54868 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
HMGCS2P54868 AC010680.1-201ENST00000590024 3590 ntBASIC2.55□□□□□ -2
HMGCS2P54868 AL356292.1-201ENST00000283110 373 ntBASIC2.55□□□□□ -2
HMGCS2P54868 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.55□□□□□ -2
HMGCS2P54868 RNU6-169P-201ENST00000365336 107 ntBASIC2.55□□□□□ -2
HMGCS2P54868 RNU5E-6P-201ENST00000365574 115 ntBASIC2.55□□□□□ -2
HMGCS2P54868 RNU6-14P-201ENST00000384630 106 ntBASIC2.55□□□□□ -2
HMGCS2P54868 RPS3AP36-201ENST00000398190 775 ntBASIC2.55□□□□□ -2
HMGCS2P54868 BX295541.1-201ENST00000417774 250 ntBASIC2.55□□□□□ -2
HMGCS2P54868 C1DP2-201ENST00000418167 426 ntBASIC2.55□□□□□ -2
HMGCS2P54868 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.55□□□□□ -2
HMGCS2P54868 AC092447.7-201ENST00000422212 1621 ntBASIC2.55□□□□□ -2
HMGCS2P54868 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.55□□□□□ -2
HMGCS2P54868 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.55□□□□□ -2
HMGCS2P54868 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.55□□□□□ -2
HMGCS2P54868 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.55□□□□□ -2
HMGCS2P54868 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.55□□□□□ -2
HMGCS2P54868 TAAR7P-201ENST00000436141 242 ntBASIC2.55□□□□□ -2
HMGCS2P54868 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.55□□□□□ -2
HMGCS2P54868 AC079448.1-201ENST00000449377 373 ntBASIC2.55□□□□□ -2
HMGCS2P54868 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.55□□□□□ -2
HMGCS2P54868 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.55□□□□□ -2
HMGCS2P54868 KLF3P2-201ENST00000465138 268 ntBASIC2.55□□□□□ -2
HMGCS2P54868 RBM43P1-201ENST00000476891 1081 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 156.8 ms